-
1
-
-
0017744334
-
Dorsal-ventral differentiation in Simonsiella and other aspects of its morphology and ultrastructure
-
879961,.; (): –
-
Pangborn J, Kuhn DA, Woods JR, Dorsal-ventral differentiation in Simonsiella and other aspects of its morphology and ultrastructure. Arch Microbiol. 1977;113(3):197–204. doi: 10.1007/BF00492025879961
-
(1977)
Arch Microbiol
, vol.113
, Issue.3
, pp. 197-204
-
-
Pangborn, J.1
Kuhn, D.A.2
Woods, J.R.3
-
2
-
-
0017663113
-
Morphogenesis and differentiation in Rhodomicrobium vannielii and other budding and prosthecate bacteria
-
334156,.; (): –
-
Whittenbury R, Dow CS, Morphogenesis and differentiation in Rhodomicrobium vannielii and other budding and prosthecate bacteria. Bacteriol Rev. 1977;41(3):754–808. 334156
-
(1977)
Bacteriol Rev
, vol.41
, Issue.3
, pp. 754-808
-
-
Whittenbury, R.1
Dow, C.S.2
-
3
-
-
84891805647
-
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
-
24225321,..; (): –.; PubMed Central PMCID: PMC3965075
-
Nordberg H, Cantor M, Dusheyko S, Hua S, Poliakov A, Shabalov I, et al. The genome portal of the Department of Energy Joint Genome Institute: 2014 updates. Nucleic acids research. 2014;42(Database issue):D26–31. doi: 10.1093/nar/gkt106924225321; PubMed Central PMCID: PMC3965075.
-
(2014)
Nucleic acids research
, vol.42
, Issue.Database issue
, pp. D26-31
-
-
Nordberg, H.1
Cantor, M.2
Dusheyko, S.3
Hua, S.4
Poliakov, A.5
Shabalov, I.6
-
4
-
-
84891822155
-
RefSeq microbial genomes database: new representation and annotation strategy
-
24316578,.; (): –.; PubMed Central PMCID: PMC3965038
-
Tatusova T, Ciufo S, Fedorov B, O'Neill K, Tolstoy I, RefSeq microbial genomes database: new representation and annotation strategy. Nucleic acids research. 2014;42(Database issue):D553–9. doi: 10.1093/nar/gkt127424316578; PubMed Central PMCID: PMC3965038.
-
(2014)
Nucleic acids research
, vol.42
, Issue.Database issue
, pp. D553-D559
-
-
Tatusova, T.1
Ciufo, S.2
Fedorov, B.3
O'Neill, K.4
Tolstoy, I.5
-
5
-
-
84895751645
-
PhyloSift: phylogenetic analysis of genomes and metagenomes
-
24482762,.;:.; PubMed Central PMCID: PMC3897386
-
Darling AE, Jospin G, Lowe E, Matsen FA, Bik HM, Eisen JA, PhyloSift: phylogenetic analysis of genomes and metagenomes. PeerJ. 2014;2:e243. doi: 10.7717/peerj.24324482762; PubMed Central PMCID: PMC3897386.
-
(2014)
PeerJ
, vol.2
, pp. e243
-
-
Darling, A.E.1
Jospin, G.2
Lowe, E.3
Matsen, F.A.4
Bik, H.M.5
Eisen, J.A.6
-
6
-
-
77949718257
-
FastTree 2—approximately maximum-likelihood trees for large alignments
-
20224823,.; ():.; PubMed Central PMCID: PMC2835736
-
Price MN, Dehal PS, Arkin AP, FastTree 2—approximately maximum-likelihood trees for large alignments. PLoS ONE. 2010;5(3):e9490. doi: 10.1371/journal.pone.000949020224823; PubMed Central PMCID: PMC2835736.
-
(2010)
PLoS ONE
, vol.5
, Issue.3
, pp. e9490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
7
-
-
85014768147
-
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
-
27095192,.; (): –
-
Letunic I, Bork P, Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic acids research. 2016;44(W1):W242–5. doi: 10.1093/nar/gkw29027095192.
-
(2016)
Nucleic acids research
, vol.44
, Issue.W1
, pp. W242-W245
-
-
Letunic, I.1
Bork, P.2
-
9
-
-
2442728636
-
Construction of biologically bunctional bacterial plasmids in vitro
-
4594039,.; (): –
-
Cohen SN, Chang ACY, Boyer HW, Helling RB, Construction of biologically bunctional bacterial plasmids in vitro. Proc Natl Acad Sci U S A. 1973;70(11):3240–4. 4594039
-
(1973)
Proc Natl Acad Sci U S A
, vol.70
, Issue.11
, pp. 3240-3244
-
-
Cohen, S.N.1
Chang, A.C.Y.2
Boyer, H.W.3
Helling, R.B.4
-
10
-
-
0015385368
-
Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA
-
4559594,.; (): –
-
Cohen SN, Chang ACY, Hsu L, Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. Proc Natl Acad Sci U S A. 1972;69(8):2110–4. 4559594
-
(1972)
Proc Natl Acad Sci U S A
, vol.69
, Issue.8
, pp. 2110-2114
-
-
Cohen, S.N.1
Chang, A.C.Y.2
Hsu, L.3
-
11
-
-
84858962167
-
Phylogeny and beyond: Scientific, historical, and conceptual significance of the first tree of life
-
22308526,.; (): –.; PubMed Central PMCID: PMC3268332
-
Pace NR, Sapp J, Goldenfeld N, Phylogeny and beyond: Scientific, historical, and conceptual significance of the first tree of life. Proc Natl Acad Sci U S A. 2012;109(4):1011–8. doi: 10.1073/pnas.110971610922308526; PubMed Central PMCID: PMC3268332.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.4
, pp. 1011-1018
-
-
Pace, N.R.1
Sapp, J.2
Goldenfeld, N.3
-
12
-
-
0031852637
-
Reclassification of species of the spiral-shaped phototrophic purple non-sulfur bacteria of the α-Proteobacteria: description of the new genera Phaeospirillum gen. nov
-
Rhodovibrio gen. nov., Rhodothalassium gen. nov. and Roseospira gen. nov. as well as transfer of Rhodospirillum fulvum to Phaeospirillum fulvum comb. nov., of Rhodospirillum molischianum to Phaeospirillum molischianum comb. nov., of Rhodospirillum salinarum to Rhodovibrio salinarum comb, nov., of Rhodospirillum sodomense to Rhodovibrio sodomensis comb. nov., of Rhodospirillum salexigens to Rhodothalassium salexigens comb. nov. and of Rhodospirillum mediosalinum to Roseospira mediosalina comb. nov
-
Imhoff JF, Petri R, Süling J, Reclassification of species of the spiral-shaped phototrophic purple non-sulfur bacteria of the α-Proteobacteria: description of the new genera Phaeospirillum gen. nov., Rhodovibrio gen. nov., Rhodothalassium gen. nov. and Roseospira gen. nov. as well as transfer of Rhodospirillum fulvum to Phaeospirillum fulvum comb. nov., of Rhodospirillum molischianum to Phaeospirillum molischianum comb. nov., of Rhodospirillum salinarum to Rhodovibrio salinarum comb, nov., of Rhodospirillum sodomense to Rhodovibrio sodomensis comb. nov., of Rhodospirillum salexigens to Rhodothalassium salexigens comb. nov. and of Rhodospirillum mediosalinum to Roseospira mediosalina comb. nov. Int J Syst Evol Micr. 1998;48(3):793–8. doi: 10.1099/00207713-48-3-793
-
(1998)
Int J Syst Evol Micr
, vol.48
, Issue.3
, pp. 793-798
-
-
Imhoff, J.F.1
Petri, R.2
Süling, J.3
-
13
-
-
78650054955
-
Reclassification of the polyphyletic genus Prosthecomicrobium to form two novel genera, Vasilyevaea gen. nov. and Bauldia gen. nov. with four new combinations: Vasilyevaea enhydra comb. nov., Vasilyevaea mishustinii comb. nov., Bauldia consociata comb. nov. and Bauldia litoralis comb. nov
-
Yee B, Oertli GE, Fuerst JA, Staley JT, Reclassification of the polyphyletic genus Prosthecomicrobium to form two novel genera, Vasilyevaea gen. nov. and Bauldia gen. nov. with four new combinations: Vasilyevaea enhydra comb. nov., Vasilyevaea mishustinii comb. nov., Bauldia consociata comb. nov. and Bauldia litoralis comb. nov. Int J Syst Evol Micr. 2010;60(Pt 12):2960–6. doi: 10.1099/ijs.0.018234-0
-
(2010)
Int J Syst Evol Micr
, vol.60
, pp. 2960-2966
-
-
Yee, B.1
Oertli, G.E.2
Fuerst, J.A.3
Staley, J.T.4
-
14
-
-
0033613376
-
Inferring the historical patterns of biological evolution
-
10553904,.; (): –
-
Pagel M, Inferring the historical patterns of biological evolution. Nature. 1999;401(6756):877–84. 10553904
-
(1999)
Nature
, vol.401
, Issue.6756
, pp. 877-884
-
-
Pagel, M.1
-
15
-
-
0031763367
-
Phylogenetic mapping of bacterial morphology
-
9802021,.; (): –
-
Siefert JL, Fox GE, Phylogenetic mapping of bacterial morphology. Microbiology. 1998;144 (Pt 10):2803–8. doi: 10.1099/00221287-144-10-28039802021.
-
(1998)
Microbiology
, vol.144
, pp. 2803-2808
-
-
Siefert, J.L.1
Fox, G.E.2
-
16
-
-
33749257121
-
The selective value of bacterial shape
-
16959965,.; (): –
-
Young KD, The selective value of bacterial shape. Microbiol Mol Biol Rev. 2006;70(3):660–703. doi: 10.1128/MMBR.00001-0616959965
-
(2006)
Microbiol Mol Biol Rev
, vol.70
, Issue.3
, pp. 660-703
-
-
Young, K.D.1
-
17
-
-
84964067888
-
Staying in shape: the impact of cell shape on bacterial survival in diverse environments
-
26864431,.; (): –
-
Yang DC, Blair KM, Salama NR, Staying in shape: the impact of cell shape on bacterial survival in diverse environments. Microbiol Mol Biol Rev. 2016;80(1):187–203. doi: 10.1128/MMBR.00031-1526864431
-
(2016)
Microbiol Mol Biol Rev
, vol.80
, Issue.1
, pp. 187-203
-
-
Yang, D.C.1
Blair, K.M.2
Salama, N.R.3
-
18
-
-
22144454684
-
Survey of motile microaerophilic bacterial morphotypes in the oxygen gradient above a marine sulfidic sediment
-
16000777,.; (): –.; PubMed Central PMCID: PMC1168987
-
Thar R, Fenchel T, Survey of motile microaerophilic bacterial morphotypes in the oxygen gradient above a marine sulfidic sediment. Applied and environmental microbiology. 2005;71(7):3682–91. doi: 10.1128/AEM.71.7.3682-3691.200516000777; PubMed Central PMCID: PMC1168987.
-
(2005)
Applied and environmental microbiology
, vol.71
, Issue.7
, pp. 3682-3691
-
-
Thar, R.1
Fenchel, T.2
-
19
-
-
0023776341
-
Motility of Campylobacter jejuni in a viscous environment: comparison with conventional rod-shaped bacteria
-
3053972,.; (): –
-
Ferrero RL, Lee A, Motility of Campylobacter jejuni in a viscous environment: comparison with conventional rod-shaped bacteria. Journal of general microbiology. 1988;134(1):53–9. doi: 10.1099/00221287-134-1-533053972.
-
(1988)
Journal of general microbiology
, vol.134
, Issue.1
, pp. 53-59
-
-
Ferrero, R.L.1
Lee, A.2
-
20
-
-
0016856950
-
Letter: Enhanced translational motion of Leptospira in viscous environments
-
1134561,.; (): –
-
Kaiser GE, Doetsch RN, Letter: Enhanced translational motion of Leptospira in viscous environments. Nature. 1975;255(5510):656–7. 1134561.
-
(1975)
Nature
, vol.255
, Issue.5510
, pp. 656-657
-
-
Kaiser, G.E.1
Doetsch, R.N.2
-
21
-
-
0035996993
-
A mathematical explanation of an increase in bacterial swimming speed with viscosity in linear-polymer solutions
-
12124260,.; (): –.; PubMed Central PMCID: PMC1302182
-
Magariyama Y, Kudo S, A mathematical explanation of an increase in bacterial swimming speed with viscosity in linear-polymer solutions. Biophys J. 2002;83(2):733–9. doi: 10.1016/S0006-3495(02)75204-112124260; PubMed Central PMCID: PMC1302182.
-
(2002)
Biophys J
, vol.83
, Issue.2
, pp. 733-739
-
-
Magariyama, Y.1
Kudo, S.2
-
22
-
-
21244452656
-
Off the hook—how bacteria survive protozoan grazing
-
15935676,.; (): –
-
Matz C, Kjelleberg S, Off the hook—how bacteria survive protozoan grazing. Trends in microbiology. 2005;13(7):302–7. doi: 10.1016/j.tim.2005.05.00915935676.
-
(2005)
Trends in microbiology
, vol.13
, Issue.7
, pp. 302-307
-
-
Matz, C.1
Kjelleberg, S.2
-
23
-
-
21344473000
-
Predation on prokaryotes in the water column and its ecological implications
-
15953930,.; (): –
-
Pernthaler J, Predation on prokaryotes in the water column and its ecological implications. Nature reviews Microbiology. 2005;3(7):537–46. doi: 10.1038/nrmicro118015953930.
-
(2005)
Nature reviews Microbiology
, vol.3
, Issue.7
, pp. 537-546
-
-
Pernthaler, J.1
-
24
-
-
32944464543
-
Stratification by cyanobacteria in lakes: a dynamic buoyancy model indicates size limitations met by Planktothrix rubescens filaments
-
16219076,.; (): –
-
Walsby AE, Stratification by cyanobacteria in lakes: a dynamic buoyancy model indicates size limitations met by Planktothrix rubescens filaments. The New phytologist. 2005;168(2):365–76. doi: 10.1111/j.1469-8137.2005.01508.x16219076.
-
(2005)
The New phytologist
, vol.168
, Issue.2
, pp. 365-376
-
-
Walsby, A.E.1
-
25
-
-
0029329193
-
Effect of bacterial cell shape on transport of bacteria in porous media
-
22176443,.; (): –
-
Weiss TH, Mills AL, Hornberger GM, Herman JS, Effect of bacterial cell shape on transport of bacteria in porous media. Environmental science & technology. 1995;29(7):1737–40. doi: 10.1021/es00007a00722176443.
-
(1995)
Environmental science & technology
, vol.29
, Issue.7
, pp. 1737-1740
-
-
Weiss, T.H.1
Mills, A.L.2
Hornberger, G.M.3
Herman, J.S.4
-
26
-
-
84995623431
-
-
. In:.:;. p. –
-
Lee N, Reichenbach H, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, The Genus Herpetosiphon. In: The Prokaryotes: Volume 7: Proteobacteria: Delta, Epsilon Subclass. New York, NY: Springer New York; 2006. p. 854–77.
-
(2006)
The Prokaryotes: Volume 7: Proteobacteria: Delta, Epsilon Subclass
, pp. 854-877
-
-
Lee, N.1
Reichenbach, H.2
Dworkin, M.3
Falkow, S.4
Rosenberg, E.5
Schleifer, K.-H.6
Stackebrandt, E.7
-
27
-
-
0014291857
-
Herpetosiphon aurantiacus gen. et sp. n., a new filamentous gliding organism
-
5669912,.; (): –.; PubMed Central PMCID: PMC315177
-
Holt JG, Lewin RA, Herpetosiphon aurantiacus gen. et sp. n., a new filamentous gliding organism. J bacteriol. 1968;95(6):2407–8. 5669912; PubMed Central PMCID: PMC315177.
-
(1968)
J bacteriol
, vol.95
, Issue.6
, pp. 2407-2408
-
-
Holt, J.G.1
Lewin, R.A.2
-
28
-
-
0018975697
-
Retrofilation and tumulation by strains of Herpetosiphon species
-
.; (): –. WOS:A1980KD40400005
-
Quinn GR, Skerman VBD, Retrofilation and tumulation by strains of Herpetosiphon species. Curr Microbiol. 1980;3(6):345–8. doi: 10.1007/Bf02601899. WOS:A1980KD40400005.
-
(1980)
Curr Microbiol
, vol.3
, Issue.6
, pp. 345-348
-
-
Quinn, G.R.1
Skerman, V.B.D.2
-
29
-
-
0014158876
-
Some properties of the green bacterium Pelodictyon clathratiforme
-
5602461,.; (): –
-
Pfennig N, Cohen-Bazire G, Some properties of the green bacterium Pelodictyon clathratiforme. Archiv für Mikrobiologie. 1967;59(1):226–36. doi: 10.1007/bf004063365602461
-
(1967)
Archiv für Mikrobiologie
, vol.59
, Issue.1
, pp. 226-236
-
-
Pfennig, N.1
Cohen-Bazire, G.2
-
30
-
-
0001232063
-
Pelodictyon phaeoclathratiforme sp. nov., a new brown-colored member of the Chlorobiaceae forming net-like colonies
-
Overmann J, Pfennig N, Pelodictyon phaeoclathratiforme sp. nov., a new brown-colored member of the Chlorobiaceae forming net-like colonies. Arch Microbiol. 1989;152(4):401–6. doi: 10.1007/bf00425181
-
(1989)
Arch Microbiol
, vol.152
, Issue.4
, pp. 401-406
-
-
Overmann, J.1
Pfennig, N.2
-
31
-
-
0034862342
-
Variability of the photosynthetic antenna of a Pelodictyon clathratiforme population from a freshwater holomictic pond
-
Gich FB, Borrego CM, Martínez-Planells A, Steensgaard DB, Garcia-Gil J, Holzwarth AR, Variability of the photosynthetic antenna of a Pelodictyon clathratiforme population from a freshwater holomictic pond. FEMS Microbiol Ecol. 2001;37(1):11–9. doi: 10.1111/j.1574-6941.2001.tb00848.x
-
(2001)
FEMS Microbiol Ecol
, vol.37
, Issue.1
, pp. 11-19
-
-
Gich, F.B.1
Borrego, C.M.2
Martínez-Planells, A.3
Steensgaard, D.B.4
Garcia-Gil, J.5
Holzwarth, A.R.6
-
32
-
-
0033574742
-
Dense populations of a giant sulfur bacterium in Namibian shelf sediments
-
10205058,.; (): –
-
Schulz HN, Brinkhoff T, Ferdelman TG, Marine MH, Teske A, Jorgensen BB, Dense populations of a giant sulfur bacterium in Namibian shelf sediments. Science. 1999;284(5413):493–5. 10205058.
-
(1999)
Science
, vol.284
, Issue.5413
, pp. 493-495
-
-
Schulz, H.N.1
Brinkhoff, T.2
Ferdelman, T.G.3
Marine, M.H.4
Teske, A.5
Jorgensen, B.B.6
-
33
-
-
84995557175
-
-
. In:.:;. p. –
-
Schulz HN, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, The Genus Thiomargarita. In: The Prokaryotes: Volume 6: Proteobacteria: Gamma Subclass. New York, NY: Springer New York; 2006. p. 1156–63.
-
(2006)
The Prokaryotes: Volume 6: Proteobacteria: Gamma Subclass
, pp. 1156-1163
-
-
Schulz, H.N.1
Dworkin, M.2
Falkow, S.3
Rosenberg, E.4
Schleifer, K.-H.5
Stackebrandt, E.6
-
34
-
-
79551490781
-
A novel, mat-forming Thiomargarita population associated with a sulfidic fluid flow from a deep-sea mud volcano
-
20946529,..; (): –
-
Girnth AC, Grunke S, Lichtschlag A, Felden J, Knittel K, Wenzhofer F, et al. A novel, mat-forming Thiomargarita population associated with a sulfidic fluid flow from a deep-sea mud volcano. Environmental microbiology. 2011;13(2):495–505. doi: 10.1111/j.1462-2920.2010.02353.x20946529.
-
(2011)
Environmental microbiology
, vol.13
, Issue.2
, pp. 495-505
-
-
Girnth, A.C.1
Grunke, S.2
Lichtschlag, A.3
Felden, J.4
Knittel, K.5
Wenzhofer, F.6
-
35
-
-
84958127418
-
Siderophore cooperation of the bacterium Pseudomonas fluorescens in soil
-
25694506,.; ():.; PubMed Central PMCID: PMC4360104
-
Lujan AM, Gomez P, Buckling A, Siderophore cooperation of the bacterium Pseudomonas fluorescens in soil. Biology letters. 2015;11(2):20140934. doi: 10.1098/rsbl.2014.093425694506; PubMed Central PMCID: PMC4360104.
-
(2015)
Biology letters
, vol.11
, Issue.2
, pp. 20140934
-
-
Lujan, A.M.1
Gomez, P.2
Buckling, A.3
-
36
-
-
0018692402
-
The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme
-
42062,.; (): –
-
Gould SJ, Lewontin RC, The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme. Proceedings of the Royal Society of London Series B, Biological sciences. 1979;205(1161):581–98. 42062.
-
(1979)
Proceedings of the Royal Society of London Series B, Biological sciences
, vol.205
, Issue.1161
, pp. 581-598
-
-
Gould, S.J.1
Lewontin, R.C.2
-
38
-
-
39149110299
-
Peptidoglycan structure and architecture
-
18194336,.; (): –
-
Vollmer W, Blanot D, de Pedro MA, Peptidoglycan structure and architecture. FEMS Microbiol Rev. 2008;32(2):149–67. doi: 10.1111/j.1574-6976.2007.00094.x18194336
-
(2008)
FEMS Microbiol Rev
, vol.32
, Issue.2
, pp. 149-167
-
-
Vollmer, W.1
Blanot, D.2
de Pedro, M.A.3
-
39
-
-
84936996066
-
Molecular mechanisms for the evolution of bacterial morphologies and growth modes
-
26106381,.;:.; PubMed Central PMCID: PMC4460556
-
Randich AM, Brun YV, Molecular mechanisms for the evolution of bacterial morphologies and growth modes. Frontiers in microbiology. 2015;6:580. doi: 10.3389/fmicb.2015.0058026106381; PubMed Central PMCID: PMC4460556.
-
(2015)
Frontiers in microbiology
, vol.6
, pp. 580
-
-
Randich, A.M.1
Brun, Y.V.2
-
40
-
-
84888203647
-
Do the divisome and elongasome share a common evolutionary past?
-
24094808,.; (): –
-
Szwedziak P, Löwe J, Do the divisome and elongasome share a common evolutionary past?Curr Opin Microbiol. 2013;16(6):745–51. doi: 10.1016/j.mib.2013.09.00324094808
-
(2013)
Curr Opin Microbiol
, vol.16
, Issue.6
, pp. 745-751
-
-
Szwedziak, P.1
Löwe, J.2
-
41
-
-
81955161171
-
Polarity and the diversity of growth mechanisms in bacteria
-
Brown PJB, Kysela DT, Brun YV, Polarity and the diversity of growth mechanisms in bacteria. Semin Cell Dev Biol. 2011;22(8):790–8. doi: 10.1016/j.semcdb.2011.06.006
-
(2011)
Semin Cell Dev Biol
, vol.22
, Issue.8
, pp. 790-798
-
-
Brown, P.J.B.1
Kysela, D.T.2
Brun, Y.V.3
-
42
-
-
84863116870
-
Polar growth in the Alphaproteobacterial order Rhizobiales
-
22307633,..; (): –.; PubMed Central PMCID: PMC3277149
-
Brown PJ, de Pedro MA, Kysela DT, Van der Henst C, Kim J, De Bolle X, et al. Polar growth in the Alphaproteobacterial order Rhizobiales. Proc Natl Acad Sci U S A. 2012;109(5):1697–701. doi: 10.1073/pnas.111447610922307633; PubMed Central PMCID: PMC3277149.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.5
, pp. 1697-1701
-
-
Brown, P.J.1
de Pedro, M.A.2
Kysela, D.T.3
Van der Henst, C.4
Kim, J.5
De Bolle, X.6
-
43
-
-
84896705451
-
Sequential evolution of bacterial morphology by co-option of a developmental regulator
-
24463524,.; (): –
-
Jiang C, Brown PJB, Ducret A, Brun YV, Sequential evolution of bacterial morphology by co-option of a developmental regulator. Nature. 2014;506(7489):489–93. doi: 10.1038/nature1290024463524
-
(2014)
Nature
, vol.506
, Issue.7489
, pp. 489-493
-
-
Jiang, C.1
Brown, P.J.B.2
Ducret, A.3
Brun, Y.V.4
-
44
-
-
84925177616
-
Mechanisms of bacterial morphogenesis: evolutionary cell biology approaches provide new insights
-
25664446,.; (): –.; PubMed Central PMCID: PMC4368449
-
Jiang C, Caccamo PD, Brun YV, Mechanisms of bacterial morphogenesis: evolutionary cell biology approaches provide new insights. BioEssays: news and reviews in molecular, cellular and developmental biology. 2015;37(4):413–25. doi: 10.1002/bies.20140009825664446; PubMed Central PMCID: PMC4368449.
-
(2015)
BioEssays: news and reviews in molecular, cellular and developmental biology
, vol.37
, Issue.4
, pp. 413-425
-
-
Jiang, C.1
Caccamo, P.D.2
Brun, Y.V.3
-
45
-
-
55549130778
-
Assemblies of DivIVA mark sites for hyphal branching and can establish new zones of cell wall growth in Streptomyces coelicolor
-
18805980,.; (): –.; PubMed Central PMCID: PMC2576665
-
Hempel AM, Wang SB, Letek M, Gil JA, Flardh K, Assemblies of DivIVA mark sites for hyphal branching and can establish new zones of cell wall growth in Streptomyces coelicolor. J bacteriol. 2008;190(22):7579–83. doi: 10.1128/JB.00839-0818805980; PubMed Central PMCID: PMC2576665.
-
(2008)
J bacteriol
, vol.190
, Issue.22
, pp. 7579-7583
-
-
Hempel, A.M.1
Wang, S.B.2
Letek, M.3
Gil, J.A.4
Flardh, K.5
-
46
-
-
0346020436
-
The bacterial cytoskeleton: an intermediate filament-like function in cell shape
-
14675535,.; (): –
-
Ausmees N, Kuhn JR, Jacobs-Wagner C, The bacterial cytoskeleton: an intermediate filament-like function in cell shape. Cell. 2003;115(6):705–13. 14675535
-
(2003)
Cell
, vol.115
, Issue.6
, pp. 705-713
-
-
Ausmees, N.1
Kuhn, J.R.2
Jacobs-Wagner, C.3
-
47
-
-
65649100437
-
Bacterial cell curvature through mechanical control of cell growth
-
19279668,..; (): –
-
Cabeen MT, Charbon G, Vollmer W, Born P, Ausmees N, Weibel DB, et al. Bacterial cell curvature through mechanical control of cell growth. EMBO J. 2009;28(9):1208–19. doi: 10.1038/emboj.2009.6119279668
-
(2009)
EMBO J
, vol.28
, Issue.9
, pp. 1208-1219
-
-
Cabeen, M.T.1
Charbon, G.2
Vollmer, W.3
Born, P.4
Ausmees, N.5
Weibel, D.B.6
-
48
-
-
68949119913
-
The elastic basis for the shape of Borrelia burgdorferi
-
19486665,.; (): –.; PubMed Central PMCID: PMC3325120
-
Dombrowski C, Kan W, Motaleb MA, Charon NW, Goldstein RE, Wolgemuth CW, The elastic basis for the shape of Borrelia burgdorferi. Biophys J. 2009;96(11):4409–17. doi: 10.1016/j.bpj.2009.02.06619486665; PubMed Central PMCID: PMC3325120.
-
(2009)
Biophys J
, vol.96
, Issue.11
, pp. 4409-4417
-
-
Dombrowski, C.1
Kan, W.2
Motaleb, M.A.3
Charon, N.W.4
Goldstein, R.E.5
Wolgemuth, C.W.6
-
49
-
-
77953265009
-
Peptidoglycan crosslinking relaxation promotes Helicobacter pylori's helical shape and stomach colonization
-
20510929,..; (): –.; PubMed Central PMCID: PMC2920535
-
Sycuro LK, Pincus Z, Gutierrez KD, Biboy J, Stern CA, Vollmer W, et al. Peptidoglycan crosslinking relaxation promotes Helicobacter pylori's helical shape and stomach colonization. Cell. 2010;141(5):822–33. doi: 10.1016/j.cell.2010.03.04620510929; PubMed Central PMCID: PMC2920535.
-
(2010)
Cell
, vol.141
, Issue.5
, pp. 822-833
-
-
Sycuro, L.K.1
Pincus, Z.2
Gutierrez, K.D.3
Biboy, J.4
Stern, C.A.5
Vollmer, W.6
-
50
-
-
84887411138
-
Flow cytometry-based enrichment for cell shape mutants identifies multiple genes that influence Helicobacter pylori morphology
-
24112477,..; (): –.; PubMed Central PMCID: PMC3844677
-
Sycuro LK, Rule CS, Petersen TW, Wyckoff TJ, Sessler T, Nagarkar DB, et al. Flow cytometry-based enrichment for cell shape mutants identifies multiple genes that influence Helicobacter pylori morphology. Molecular microbiology. 2013;90(4):869–83. doi: 10.1111/mmi.1240524112477; PubMed Central PMCID: PMC3844677.
-
(2013)
Molecular microbiology
, vol.90
, Issue.4
, pp. 869-883
-
-
Sycuro, L.K.1
Rule, C.S.2
Petersen, T.W.3
Wyckoff, T.J.4
Sessler, T.5
Nagarkar, D.B.6
-
51
-
-
80052334346
-
Helicobacter pylori possesses four coiled-coil-rich proteins that form extended filamentous structures and control cell shape and motility
-
21642462,.; (): –.; PubMed Central PMCID: PMC3165534
-
Specht M, Schatzle S, Graumann PL, Waidner B, Helicobacter pylori possesses four coiled-coil-rich proteins that form extended filamentous structures and control cell shape and motility. J bacteriol. 2011;193(17):4523–30. doi: 10.1128/JB.00231-1121642462; PubMed Central PMCID: PMC3165534.
-
(2011)
J bacteriol
, vol.193
, Issue.17
, pp. 4523-4530
-
-
Specht, M.1
Schatzle, S.2
Graumann, P.L.3
Waidner, B.4
-
52
-
-
73649117859
-
A novel system of cytoskeletal elements in the human pathogen Helicobacter pylori
-
19936218,..; ():.; PubMed Central PMCID: PMC2776988
-
Waidner B, Specht M, Dempwolff F, Haeberer K, Schaetzle S, Speth V, et al. A novel system of cytoskeletal elements in the human pathogen Helicobacter pylori. PLoS Pathog. 2009;5(11):e1000669. doi: 10.1371/journal.ppat.100066919936218; PubMed Central PMCID: PMC2776988.
-
(2009)
PLoS Pathog
, vol.5
, Issue.11
, pp. e1000669
-
-
Waidner, B.1
Specht, M.2
Dempwolff, F.3
Haeberer, K.4
Schaetzle, S.5
Speth, V.6
-
53
-
-
0036181778
-
Exploring prokaryotic diversity in the genomic era
-
REVIEWS0003 11864374,.; ():.; PubMed Central PMCID: PMC139013
-
Hugenholtz P, Exploring prokaryotic diversity in the genomic era. Genome biology. 2002;3(2):REVIEWS0003. 11864374; PubMed Central PMCID: PMC139013.
-
(2002)
Genome biology
, vol.3
, Issue.2
-
-
Hugenholtz, P.1
-
54
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein J, Phylogenies and the comparative method. Am Nat. 1985;125(1):1–15.
-
(1985)
Am Nat
, vol.125
, Issue.1
, pp. 1-15
-
-
Felsenstein, J.1
-
55
-
-
72949101201
-
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
-
20033048,..; (): –.; PubMed Central PMCID: PMC3073058
-
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature. 2009;462(7276):1056–60. doi: 10.1038/nature0865620033048; PubMed Central PMCID: PMC3073058.
-
(2009)
Nature
, vol.462
, Issue.7276
, pp. 1056-1060
-
-
Wu, D.1
Hugenholtz, P.2
Mavromatis, K.3
Pukall, R.4
Dalin, E.5
Ivanova, N.N.6
-
56
-
-
84966929319
-
A new view of the tree of life
-
Hug LA, Baker BJ, Anantharaman K, Brown CT, Probst AJ, Castelle CJ, et al. A new view of the tree of life. Natur Microbiol. 2016;1:16048. doi: 10.1038/nmicrobiol.2016.48http://www.nature.com/articles/nmicrobiol201648.
-
(2016)
Natur Microbiol
, vol.1
, pp. 16048
-
-
Hug, L.A.1
Baker, B.J.2
Anantharaman, K.3
Brown, C.T.4
Probst, A.J.5
Castelle, C.J.6
-
57
-
-
0036324056
-
High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates
-
12147485,.; (): –.; PubMed Central PMCID: PMC124033
-
Connon SA, Giovannoni SJ, High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Applied and environmental microbiology. 2002;68(8):3878–85. 12147485; PubMed Central PMCID: PMC124033.
-
(2002)
Applied and environmental microbiology
, vol.68
, Issue.8
, pp. 3878-3885
-
-
Connon, S.A.1
Giovannoni, S.J.2
-
58
-
-
84949495449
-
Microscopy-Based High-Content Screening
-
26638068,.; (): –
-
Boutros M, Heigwer F, Laufer C, Microscopy-Based High-Content Screening. Cell. 2015;163(6):1314–25. doi: 10.1016/j.cell.2015.11.00726638068.
-
(2015)
Cell
, vol.163
, Issue.6
, pp. 1314-1325
-
-
Boutros, M.1
Heigwer, F.2
Laufer, C.3
-
59
-
-
79960191105
-
Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria
-
21501250,.; (): –.; PubMed Central PMCID: PMC3134142
-
Furchtgott L, Wingreen NS, Huang KC, Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria. Molecular microbiology. 2011;81(2):340–53. doi: 10.1111/j.1365-2958.2011.07616.x21501250; PubMed Central PMCID: PMC3134142.
-
(2011)
Molecular microbiology
, vol.81
, Issue.2
, pp. 340-353
-
-
Furchtgott, L.1
Wingreen, N.S.2
Huang, K.C.3
-
60
-
-
84958061161
-
Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis
-
26538279,..; (): –.; PubMed Central PMCID: PMC4752901
-
Paintdakhi A, Parry B, Campos M, Irnov I, Elf J, Surovtsev I, et al. Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis. Molecular microbiology. 2016;99(4):767–77. doi: 10.1111/mmi.1326426538279; PubMed Central PMCID: PMC4752901.
-
(2016)
Molecular microbiology
, vol.99
, Issue.4
, pp. 767-777
-
-
Paintdakhi, A.1
Parry, B.2
Campos, M.3
Irnov, I.4
Elf, J.5
Surovtsev, I.6
-
61
-
-
84987921775
-
MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis
-
Ducret A, Quardokus EM, Brun YV, MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis. Natur Microbiol. 2016;1:16077. doi: 10.1038/nmicrobiol.2016.77
-
(2016)
Natur Microbiol
, vol.1
, pp. 16077
-
-
Ducret, A.1
Quardokus, E.M.2
Brun, Y.V.3
-
62
-
-
84958606331
-
Single-cell genome sequencing: current state of the science
-
26806412,.; (): –
-
Gawad C, Koh W, Quake SR, Single-cell genome sequencing: current state of the science. Nature reviews Genetics. 2016;17(3):175–88. doi: 10.1038/nrg.2015.1626806412.
-
(2016)
Nature reviews Genetics
, vol.17
, Issue.3
, pp. 175-188
-
-
Gawad, C.1
Koh, W.2
Quake, S.R.3
-
63
-
-
34547540925
-
Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth
-
17620602,..; (): –.; PubMed Central PMCID: PMC1924555
-
Marcy Y, Ouverney C, Bik EM, Losekann T, Ivanova N, Martin HG, et al. Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth. Proc Natl Acad Sci U S A. 2007;104(29):11889–94. doi: 10.1073/pnas.070466210417620602; PubMed Central PMCID: PMC1924555.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.29
, pp. 11889-11894
-
-
Marcy, Y.1
Ouverney, C.2
Bik, E.M.3
Losekann, T.4
Ivanova, N.5
Martin, H.G.6
-
64
-
-
38349059057
-
The dynamic interplay between a cell fate determinant and a lysozyme homolog drives the asymmetric division cycle of Caulobacter crescentus
-
18198338,.; (): –.; PubMed Central PMCID: PMC2192755
-
Radhakrishnan SK, Thanbichler M, Viollier PH, The dynamic interplay between a cell fate determinant and a lysozyme homolog drives the asymmetric division cycle of Caulobacter crescentus. Genes & development. 2008;22(2):212–25. doi: 10.1101/gad.160180818198338; PubMed Central PMCID: PMC2192755.
-
(2008)
Genes & development
, vol.22
, Issue.2
, pp. 212-225
-
-
Radhakrishnan, S.K.1
Thanbichler, M.2
Viollier, P.H.3
-
65
-
-
40149104553
-
Comparing patterns of natural selection across species using selective signatures
-
18266472,.; ():.; PubMed Central PMCID: PMC2233676
-
Shapiro BJ, Alm EJ, Comparing patterns of natural selection across species using selective signatures. PLoS Genet. 2008;4(2):e23. doi: 10.1371/journal.pgen.004002318266472; PubMed Central PMCID: PMC2233676.
-
(2008)
PLoS Genet
, vol.4
, Issue.2
, pp. e23
-
-
Shapiro, B.J.1
Alm, E.J.2
-
66
-
-
27844439855
-
Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level
-
16107592,.; (): –
-
Zhang J, Nielsen R, Yang Z, Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level. Molecular biology and evolution. 2005;22(12):2472–9. doi: 10.1093/molbev/msi23716107592.
-
(2005)
Molecular biology and evolution
, vol.22
, Issue.12
, pp. 2472-2479
-
-
Zhang, J.1
Nielsen, R.2
Yang, Z.3
-
67
-
-
84938777314
-
Common cell shape evolution of two nasopharyngeal pathogens
-
26162030,..; ():.; PubMed Central PMCID: PMC4498754
-
Veyrier FJ, Biais N, Morales P, Belkacem N, Guilhen C, Ranjeva S, et al. Common cell shape evolution of two nasopharyngeal pathogens. PLoS Genet. 2015;11(7):e1005338. doi: 10.1371/journal.pgen.100533826162030; PubMed Central PMCID: PMC4498754.
-
(2015)
PLoS Genet
, vol.11
, Issue.7
, pp. e1005338
-
-
Veyrier, F.J.1
Biais, N.2
Morales, P.3
Belkacem, N.4
Guilhen, C.5
Ranjeva, S.6
-
68
-
-
84870593406
-
In Situ probing of newly synthesized peptidoglycan in live bacteria with fluorescent D-amino acids
-
23055266,..; (): –.; PubMed Central PMCID: PMC3589519
-
Kuru E, Hughes HV, Brown PJ, Hall E, Tekkam S, Cava F, et al. In Situ probing of newly synthesized peptidoglycan in live bacteria with fluorescent D-amino acids. Angewandte Chemie. 2012;51(50):12519–23. doi: 10.1002/anie.20120674923055266; PubMed Central PMCID: PMC3589519.
-
(2012)
Angewandte Chemie
, vol.51
, Issue.50
, pp. 12519-12523
-
-
Kuru, E.1
Hughes, H.V.2
Brown, P.J.3
Hall, E.4
Tekkam, S.5
Cava, F.6
-
69
-
-
84925969842
-
Synthesis of fluorescent D-amino acids and their use for probing peptidoglycan synthesis and bacterial growth in situ
-
25474031,.; (): –.; PubMed Central PMCID: PMC4300143
-
Kuru E, Tekkam S, Hall E, Brun YV, Van Nieuwenhze MS, Synthesis of fluorescent D-amino acids and their use for probing peptidoglycan synthesis and bacterial growth in situ. Nature protocols. 2015;10(1):33–52. doi: 10.1038/nprot.2014.19725474031; PubMed Central PMCID: PMC4300143.
-
(2015)
Nature protocols
, vol.10
, Issue.1
, pp. 33-52
-
-
Kuru, E.1
Tekkam, S.2
Hall, E.3
Brun, Y.V.4
Van Nieuwenhze, M.S.5
-
70
-
-
84912066786
-
Systematic perturbation of cytoskeletal function reveals a linear scaling relationship between cell geometry and fitness
-
25456141,..; (): –
-
Monds RD, Lee TK, Colavin A, Ursell T, Quan S, Cooper TF, et al. Systematic perturbation of cytoskeletal function reveals a linear scaling relationship between cell geometry and fitness. Cell reports. 2014;9(4):1528–37. doi: 10.1016/j.celrep.2014.10.04025456141.
-
(2014)
Cell reports
, vol.9
, Issue.4
, pp. 1528-1537
-
-
Monds, R.D.1
Lee, T.K.2
Colavin, A.3
Ursell, T.4
Quan, S.5
Cooper, T.F.6
|