Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

PLoS Genetics

Volumn 12, Issue 9, 2016, Pages

  McNally, Alan ^a,b   Oren, Yaara ^c   Kelly, Darren ^d   Pascoe, Ben ^e   Dunn, Steven ^a   Sreecharan, Tristan ^a   Vehkala, Minna ^f   Välimäki, Niko ^f   Prentice, Michael B ^g   Ashour, Amgad ^g   Avram, Oren ^c   Pupko, Tal ^c   Dobrindt, Ulrich ^h   Literak, Ivan ⁱ   Guenther, Sebastian ^j   Schaufler, Katharina ^j   Wieler, Lothar H ^j,k   Zhiyong, Zong ^l   Sheppard, Samuel K ^e   McInerney, James O ^d,m   Corander, Jukka ^f,n   more..

^a NOTTINGHAM TRENT UNIVERSITY   (United Kingdom)

^b UNIVERSITY OF BIRMINGHAM   (United Kingdom)

^c TEL AVIV UNIVERSITY   (Israel)

^d NATIONAL UNIVERSITY OF IRELAND   (Ireland)

^e SWANSEA UNIVERSITY   (United Kingdom)

^f UNIVERSITY OF HELSINKI   (Finland)

^g UNIVERSITY COLLEGE CORK   (Ireland)

^h UNIVERSITY OF MÜNSTER   (Germany)

ⁱ UNIVERSITY OF VETERINARY AND PHARMACEUTICAL SCIENCES   (Czech Republic)

^j FREIE UNIVERSITÄT BERLIN   (Germany)

^k ROBERT KOCH INSTITUTE   (Germany)

^l SICHUAN UNIVERSITY   (China)

^m UNIVERSITY OF MANCHESTER   (United Kingdom)

ⁿ UNIVERSITY OF OSLO   (Norway)

more..

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; EXTENDED SPECTRUM BETA LACTAMASE;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL MUTATION; BACTERIUM ISOLATE; CLADISTICS; ESCHERICHIA COLI; EVOLUTIONARY ADAPTATION; GENE CLUSTER; GENE REGULATORY NETWORK; GENETIC ASSOCIATION; GENETIC VARIATION; GENOME ANALYSIS; HOST RANGE; MICROBIAL POPULATION DYNAMICS; MULTIDRUG RESISTANCE; NONHUMAN; PHYLOGENY; PLASMID; POPULATION STRUCTURE; REGULATORY SEQUENCE; DNA SEQUENCE; DRUG EFFECTS; ESCHERICHIA COLI INFECTIONS; GENETICS; HUMAN; MOLECULAR EVOLUTION; PATHOGENICITY;

DRUG RESISTANCE, MICROBIAL; ESCHERICHIA COLI; ESCHERICHIA COLI INFECTIONS; EVOLUTION, MOLECULAR; GENOME, BACTERIAL; HUMANS; PHYLOGENY; REGULATORY SEQUENCES, NUCLEIC ACID; SEQUENCE ANALYSIS, DNA;

EID: 84990240770     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1006280     Document Type: Article

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