-
1
-
-
14244252178
-
Bacterial translocation (BT) in cirrhosis
-
Wiest, R., Garcia-Tsao, G. Bacterial translocation (BT) in cirrhosis. Hepatology 41, 422-433 (2005).
-
(2005)
Hepatology
, vol.41
, pp. 422-433
-
-
Wiest, R.1
Garcia-Tsao, G.2
-
2
-
-
84890554765
-
Pathological bacterial translocation in liver cirrhosis
-
Wiest, R., Lawson, M., Geuking, M. Pathological bacterial translocation in liver cirrhosis. J Hepatol 60, 197-209 (2014).
-
(2014)
J Hepatol
, vol.60
, pp. 197-209
-
-
Wiest, R.1
Lawson, M.2
Geuking, M.3
-
3
-
-
0019631483
-
Barrier function of epithelia
-
Powell, D. W. Barrier function of epithelia. Am J Physiol 241, G275-G288 (1981).
-
(1981)
Am J Physiol
, vol.241
, pp. G275-G288
-
-
Powell, D.W.1
-
4
-
-
17544378230
-
Effect of cisapride on intestinal bacterial overgrowth and bacterial translocation in cirrhosis
-
Pardo, A. et al. Effect of cisapride on intestinal bacterial overgrowth and bacterial translocation in cirrhosis. Hepatology 31, 858-863 (2000).
-
(2000)
Hepatology
, vol.31
, pp. 858-863
-
-
Pardo, A.1
-
5
-
-
0025157125
-
The diagnosis of small bowel bacterial overgrowth. Reliability of jejunal culture and inadequacy of breath hydrogen testing
-
Corazza, G. R. et al. The diagnosis of small bowel bacterial overgrowth. Reliability of jejunal culture and inadequacy of breath hydrogen testing. Gastroenterology 98, 302-309 (1990).
-
(1990)
Gastroenterology
, vol.98
, pp. 302-309
-
-
Corazza, G.R.1
-
6
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg, P. B. et al. Diversity of the human intestinal microbial flora. Science 308, 1635-1638 (2005).
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
-
7
-
-
84955444679
-
Levan Enhances Associated Growth of Bacteroides, Escherichia, Streptococcus and Faecalibacterium in Fecal Microbiota
-
Adamberg, K. et al. Levan Enhances Associated Growth of Bacteroides, Escherichia, Streptococcus and Faecalibacterium in Fecal Microbiota. Plos One 10, e0144042 (2015).
-
(2015)
Plos One
, vol.10
, pp. e0144042
-
-
Adamberg, K.1
-
8
-
-
84944755228
-
A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity
-
Angelakis, E. et al. A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity. Plos One 10, e0137784 (2015).
-
(2015)
Plos One
, vol.10
, pp. e0137784
-
-
Angelakis, E.1
-
9
-
-
84925223549
-
Altered duodenal microbiota composition in celiac disease patients suffering from persistent symptoms on a longterm gluten-free diet
-
Wacklin, P. et al. Altered duodenal microbiota composition in celiac disease patients suffering from persistent symptoms on a longterm gluten-free diet. Am J Gastroenterol 109, 1933-1941 (2014).
-
(2014)
Am J Gastroenterol
, vol.109
, pp. 1933-1941
-
-
Wacklin, P.1
-
10
-
-
80755167706
-
Bacterial translocation in cirrhosis is not caused by an abnormal small bowel gut microbiota
-
Steed, H. et al. Bacterial translocation in cirrhosis is not caused by an abnormal small bowel gut microbiota. FEMS Immunol Med Microbiol 63, 346-354 (2011).
-
(2011)
FEMS Immunol Med Microbiol
, vol.63
, pp. 346-354
-
-
Steed, H.1
-
11
-
-
77954834323
-
Bacterial diversity in the oral cavity of 10 healthy individuals
-
Bik, E. M. et al. Bacterial diversity in the oral cavity of 10 healthy individuals. Isme J 4, 962-974 (2010).
-
(2010)
Isme J
, vol.4
, pp. 962-974
-
-
Bik, E.M.1
-
12
-
-
63849171250
-
Global diversity in the human salivary microbiome
-
Nasidze, I., Li, J., Quinque, D., Tang, K., Stoneking, M. Global diversity in the human salivary microbiome. Genome Res 19, 636-643 (2009).
-
(2009)
Genome Res
, vol.19
, pp. 636-643
-
-
Nasidze, I.1
Li, J.2
Quinque, D.3
Tang, K.4
Stoneking, M.5
-
13
-
-
84907225684
-
Alterations of the human gut microbiome in liver cirrhosis
-
Qin, N. et al. Alterations of the human gut microbiome in liver cirrhosis. Nature 513, 59-64 (2014).
-
(2014)
Nature
, vol.513
, pp. 59-64
-
-
Qin, N.1
-
14
-
-
84942553486
-
Salivary microbiota reflects changes in gut microbiota in cirrhosis with hepatic encephalopathy
-
Bajaj, J. S. et al. Salivary microbiota reflects changes in gut microbiota in cirrhosis with hepatic encephalopathy. Hepatology 62, 1260-1271 (2015).
-
(2015)
Hepatology
, vol.62
, pp. 1260-1271
-
-
Bajaj, J.S.1
-
15
-
-
84859743410
-
Discrimination of the oral microbiota associated with high hydrogen sulfide and methyl mercaptan production
-
Takeshita, T. et al. Discrimination of the oral microbiota associated with high hydrogen sulfide and methyl mercaptan production. Sci Rep 2, 215 (2012).
-
(2012)
Sci Rep
, vol.2
, pp. 215
-
-
Takeshita, T.1
-
16
-
-
0021223519
-
Blood and brain concentrations of mercaptans in hepatic and methanethiol induced coma
-
Al Mardini, H., Bartlett, K., Record, C. O. Blood and brain concentrations of mercaptans in hepatic and methanethiol induced coma. Gut 25, 284-290 (1984).
-
(1984)
Gut
, vol.25
, pp. 284-290
-
-
Al Mardini, H.1
Bartlett, K.2
Record, C.O.3
-
17
-
-
84988429373
-
Gut microbiota drive the development of neuro-inflammatory response in cirrhosis
-
Epub ahead of print
-
Kang, D. J. et al. Gut microbiota drive the development of neuro-inflammatory response in cirrhosis. Hepatology, doi: 10. 1002/hep. 28696. [Epub ahead of print]) (2016).
-
(2016)
Hepatology
-
-
Kang, D.J.1
-
18
-
-
84872828375
-
Epithelial cell invasion by Campylobacter jejuni: Trigger or zipper mechanism
-
T, O. C., Backert, S. Host epithelial cell invasion by Campylobacter jejuni: trigger or zipper mechanism? Front Cell Infect Microbiol 2, 25 (2012).
-
(2012)
Front Cell Infect Microbiol
, vol.2
, pp. 25
-
-
Backert, T.O.C.1
Host, S.2
-
19
-
-
0031864184
-
Type III protein secretion systems in bacterial pathogens of animals and plants
-
Hueck, C. J. Type III protein secretion systems in bacterial pathogens of animals and plants. Microbiol Mol Biol Rev 62, 379-433 (1998).
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 379-433
-
-
Hueck, C.J.1
-
20
-
-
0026741044
-
Non-immunological defence mechanisms of the gut
-
Sarker, S. A., Gyr, K. Non-immunological defence mechanisms of the gut. Gut 33, 987-993 (1992).
-
(1992)
Gut
, vol.33
, pp. 987-993
-
-
Sarker, S.A.1
Gyr, K.2
-
21
-
-
0029909320
-
Role of the gut in the pathophysiology of extrahepatic biliary obstruction
-
Clements, W. D. et al. Role of the gut in the pathophysiology of extrahepatic biliary obstruction. Gut 39, 587-593 (1996).
-
(1996)
Gut
, vol.39
, pp. 587-593
-
-
Clements, W.D.1
-
22
-
-
0030897255
-
Altered small bowel motility in patients with liver cirrhosis depends on severity of liver disease
-
Madrid, A. M., Cumsille, F., Defilippi, C. Altered small bowel motility in patients with liver cirrhosis depends on severity of liver disease. Dig Dis Sci 42, 738-742 (1997).
-
(1997)
Dig Dis Sci
, vol.42
, pp. 738-742
-
-
Madrid, A.M.1
Cumsille, F.2
Defilippi, C.3
-
23
-
-
84886600297
-
Decompensated cirrhotics have slower intestinal transit times as compared with compensated cirrhotics and healthy controls
-
Chander Roland, B., Garcia-Tsao, G., Ciarleglio, M. M., Deng, Y., Sheth, A. Decompensated cirrhotics have slower intestinal transit times as compared with compensated cirrhotics and healthy controls. J Clin Gastroenterol 47, 888-893 (2013).
-
(2013)
J Clin Gastroenterol
, vol.47
, pp. 888-893
-
-
Chander Roland, B.1
Garcia-Tsao, G.2
Ciarleglio, M.M.3
Deng, Y.4
Sheth, A.5
-
24
-
-
0031759395
-
Small intestine dysmotility and bacterial overgrowth in cirrhotic patients with spontaneous bacterial peritonitis
-
Chang, C. S., Chen, G. H., Lien, H. C., Yeh, H. Z. Small intestine dysmotility and bacterial overgrowth in cirrhotic patients with spontaneous bacterial peritonitis. Hepatology 28, 1187-1190 (1998).
-
(1998)
Hepatology
, vol.28
, pp. 1187-1190
-
-
Chang, C.S.1
Chen, G.H.2
Lien, H.C.3
Yeh, H.Z.4
-
25
-
-
84904968332
-
Functional genomics of Lactobacillus casei establishment in the gut
-
Licandro-Seraut, H., Scornec, H., Pedron, T., Cavin, J. F., Sansonetti, P. J. Functional genomics of Lactobacillus casei establishment in the gut. Proc Natl Acad Sci USA 111, E3101-E3109 (2014).
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. E3101-E3109
-
-
Licandro-Seraut, H.1
Scornec, H.2
Pedron, T.3
Cavin, J.F.4
Sansonetti, P.J.5
-
26
-
-
84877127954
-
Characterization of a regulatory network of peptide antibiotic detoxification modules in Lactobacillus casei BL23
-
Revilla-Guarinos, A. et al. Characterization of a regulatory network of peptide antibiotic detoxification modules in Lactobacillus casei BL23. Appl Environ Microbiol 79, 3160-3170 (2013).
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 3160-3170
-
-
Revilla-Guarinos, A.1
-
27
-
-
84971373023
-
Age-related changes in gut microbiota composition from newborn to centenarian: A cross-sectional study
-
Odamaki, T. et al. Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study. BMC Microbiol 16, 90 (2016).
-
(2016)
BMC Microbiol
, vol.16
, pp. 90
-
-
Odamaki, T.1
-
28
-
-
84977664082
-
Alterations and correlations of the gut microbiome, metabolism and immunity in patients with primary biliary cirrhosis
-
Lv, L. X. et al. Alterations and correlations of the gut microbiome, metabolism and immunity in patients with primary biliary cirrhosis. Environ Microbiol 18, 2272-2286 (2016).
-
(2016)
Environ Microbiol
, vol.18
, pp. 2272-2286
-
-
Lv, L.X.1
-
29
-
-
84874605846
-
Gut-liver axis: An immune link between celiac disease and primary biliary cirrhosis
-
Volta, U., Caio, G., Tovoli, F., De Giorgio, R. Gut-liver axis: an immune link between celiac disease and primary biliary cirrhosis. Expert Rev Gastroenterol Hepatol 7, 253-261 (2013).
-
(2013)
Expert Rev Gastroenterol Hepatol
, vol.7
, pp. 253-261
-
-
Volta, U.1
Caio, G.2
Tovoli, F.3
De Giorgio, R.4
-
30
-
-
84962708324
-
Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. Flavescens Strain in Duodenum of Adult Celiac Patients
-
D'Argenio, V. et al. Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients. Am J Gastroenterol (2016).
-
(2016)
Am J Gastroenterol
-
-
D'Argenio, V.1
-
31
-
-
84880913324
-
Changes in cystic fibrosis airway microbiota at pulmonary exacerbation
-
Carmody, L. A. et al. Changes in cystic fibrosis airway microbiota at pulmonary exacerbation. Ann Am Thorac Soc 10, 179-187 (2013).
-
(2013)
Ann Am Thorac Soc
, vol.10
, pp. 179-187
-
-
Carmody, L.A.1
-
32
-
-
84970044586
-
Primary sclerosing cholangitis is characterised by intestinal dysbiosis independent from IBD
-
Epub ahead of print
-
Sabino, J. et al. Primary sclerosing cholangitis is characterised by intestinal dysbiosis independent from IBD. Gut, doi: 10. 1136/gutjnl-2015-311004. [Epub ahead of print]) (2016).
-
(2016)
Gut
-
-
Sabino, J.1
-
33
-
-
36749079116
-
Antimicrobial susceptibilities and clinical sources of Dialister species
-
Morio, F. et al. Antimicrobial susceptibilities and clinical sources of Dialister species. Antimicrob Agents Chemother 51, 4498-4501 (2007).
-
(2007)
Antimicrob Agents Chemother
, vol.51
, pp. 4498-4501
-
-
Morio, F.1
-
34
-
-
84959269366
-
A comparison of the gut microbiome between long-term users and non-users of proton pump inhibitors
-
Clooney, A. G. et al. A comparison of the gut microbiome between long-term users and non-users of proton pump inhibitors. Aliment Pharmacol Ther 43, 974-984 (2016).
-
(2016)
Aliment Pharmacol Ther
, vol.43
, pp. 974-984
-
-
Clooney, A.G.1
-
35
-
-
0034079806
-
Bulleidia extructa gen. nov., sp. nov., isolated from the oral cavity
-
Downes, J. et al. Bulleidia extructa gen. nov., sp. nov., isolated from the oral cavity. Int J Syst Evol Microbiol 50 Pt 3, 979-983 (2000).
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 979-983
-
-
Downes, J.1
-
36
-
-
30844445852
-
Effects of esophageal varice eradication on portal hypertensive gastropathy and fundal varices: A retrospective and comparative study
-
Yuksel, O. et al. Effects of esophageal varice eradication on portal hypertensive gastropathy and fundal varices: a retrospective and comparative study. Dig Dis Sci 51, 27-30 (2006).
-
(2006)
Dig Dis Sci
, vol.51
, pp. 27-30
-
-
Yuksel, O.1
-
37
-
-
0015854966
-
Transection of the oesophagus for bleeding oesophageal varices
-
Pugh, R. N., Murray-Lyon, I. M., Dawson, J. L., Pietroni, M. C., Williams, R. Transection of the oesophagus for bleeding oesophageal varices. Br J Surg 60, 646-649 (1973).
-
(1973)
Br J Surg
, vol.60
, pp. 646-649
-
-
Pugh, R.N.1
Murray-Lyon, I.M.2
Dawson, J.L.3
Pietroni, M.C.4
Williams, R.5
-
38
-
-
84862997111
-
Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer
-
Chen, W., Liu, F., Ling, Z., Tong, X., Xiang, C. Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer. Plos One 7, e39743 (2012).
-
(2012)
Plos One
, vol.7
, pp. e39743
-
-
Chen, W.1
Liu, F.2
Ling, Z.3
Tong, X.4
Xiang, C.5
-
39
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7, 335-336 (2010).
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
-
40
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar, R. C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
41
-
-
84876427223
-
Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
-
McMurdie, P. J., Holmes, S. phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. Plos One 8, e61217 (2013).
-
(2013)
Plos One
, vol.8
, pp. e61217
-
-
McMurdie, P.J.1
Holmes, S.2
-
42
-
-
84884127512
-
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
-
Langille, M. G. et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol 31, 814-821 (2013).
-
(2013)
Nat Biotechnol
, vol.31
, pp. 814-821
-
-
Langille, M.G.1
-
43
-
-
77955801615
-
Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Goecks, J., Nekrutenko, A., Taylor, J., Galaxy, T. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 11, R86 (2010).
-
(2010)
Genome Biol
, vol.11
, pp. R86
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
Galaxy, T.4
|