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Volumn 113, Issue 38, 2016, Pages 10601-10606

Ammonium and nitrite oxidation at nanomolar oxygen concentrations in oxygen minimum zone waters

Author keywords

Ammonium oxidation; Kinetics; Nitrite oxidation; OMZ; Oxygen

Indexed keywords

AMMONIA; NITRITE; OXYGEN; WATER;

EID: 84988945722     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1600359113     Document Type: Article
Times cited : (182)

References (72)
  • 1
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive Earth's biogeochemical cycles
    • Falkowski PG, Fenchel T, Delong EF (2008) The microbial engines that drive Earth's biogeochemical cycles. Science 320(5879):1034-1039.
    • (2008) Science , vol.320 , Issue.5879 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    Delong, E.F.3
  • 2
    • 0001882425 scopus 로고
    • The oxygen minima in relation to ocean circulation
    • Wyrtki K (1962) The oxygen minima in relation to ocean circulation. Deep Sea Res 9:11-23.
    • (1962) Deep Sea Res , vol.9 , pp. 11-23
    • Wyrtki, K.1
  • 3
    • 44749092326 scopus 로고    scopus 로고
    • Oxygen minimum zones in the eastern tropical Atlantic and Pacific oceans
    • Karstensen J, Stramma L, Visbeck M (2008) Oxygen minimum zones in the eastern tropical Atlantic and Pacific oceans. Prog Oceanogr 77(4):331-350.
    • (2008) Prog Oceanogr , vol.77 , Issue.4 , pp. 331-350
    • Karstensen, J.1    Stramma, L.2    Visbeck, M.3
  • 4
    • 0030814810 scopus 로고    scopus 로고
    • Global patterns of marine nitrogen fixation and denitrification
    • Gruber N, Sarimento JL (1997) Global patterns of marine nitrogen fixation and denitrification. Global Biogeochem Cycles 11:235-266.
    • (1997) Global Biogeochem Cycles , vol.11 , pp. 235-266
    • Gruber, N.1    Sarimento, J.L.2
  • 5
    • 0035197026 scopus 로고    scopus 로고
    • The oceanic fixed nitrogen and nitrous oxide budgets: Moving targets as we enter the anthropocene
    • Codispoti LA, et al. (2001) The oceanic fixed nitrogen and nitrous oxide budgets: Moving targets as we enter the anthropocene. Scientia Marina 65:85-102.
    • (2001) Scientia Marina , vol.65 , pp. 85-102
    • Codispoti, L.A.1
  • 6
    • 84883659095 scopus 로고    scopus 로고
    • Marine denitrification rates determined from a global 3-D inverse model
    • DeVries T, Deutsch C, Rafter PA, Primeau F (2013) Marine denitrification rates determined from a global 3-D inverse model. Biogeosciences 10:2481-2496.
    • (2013) Biogeosciences , vol.10 , pp. 2481-2496
    • DeVries, T.1    Deutsch, C.2    Rafter, P.A.3    Primeau, F.4
  • 7
    • 18144367022 scopus 로고    scopus 로고
    • Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation
    • Kuypers MM, et al. (2005) Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation. Proc Natl Acad Sci USA 102(18):6478-6483.
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.18 , pp. 6478-6483
    • Kuypers, M.M.1
  • 8
    • 33748328532 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation in the oxygen-deficient waters off northern Chile
    • Thamdrup B, et al. (2006) Anaerobic ammonium oxidation in the oxygen-deficient waters off northern Chile. Limnol Oceanogr 51:2145-2156.
    • (2006) Limnol Oceanogr , vol.51 , pp. 2145-2156
    • Thamdrup, B.1
  • 9
    • 84864972038 scopus 로고    scopus 로고
    • Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific
    • Dalsgaard T, Thamdrup B, Farías L, Revsbech NP (2012) Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific. Limnol Oceanogr 57:1331-1346.
    • (2012) Limnol Oceanogr , vol.57 , pp. 1331-1346
    • Dalsgaard, T.1    Thamdrup, B.2    Farías, L.3    Revsbech, N.P.4
  • 10
    • 84874616901 scopus 로고    scopus 로고
    • Nitrogen cycling driven by organic matter export in the South Pacific oxygen minimum zone
    • Kalvelage T, et al. (2013) Nitrogen cycling driven by organic matter export in the South Pacific oxygen minimum zone. Nat Geosci 6:228-234.
    • (2013) Nat Geosci , vol.6 , pp. 228-234
    • Kalvelage, T.1
  • 11
    • 46449104196 scopus 로고    scopus 로고
    • Expanding oxygen-minimum zones in the tropical oceans
    • Stramma L, Johnson GC, Sprintall J, Mohrholz V (2008) Expanding oxygen-minimum zones in the tropical oceans. Science 320(5876):655-658.
    • (2008) Science , vol.320 , Issue.5876 , pp. 655-658
    • Stramma, L.1    Johnson, G.C.2    Sprintall, J.3    Mohrholz, V.4
  • 12
    • 84555205238 scopus 로고    scopus 로고
    • Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones
    • Kalvelage T, et al. (2011) Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones. PLoS One 6(12):e29299.
    • (2011) PLoS One , vol.6 , Issue.12
    • Kalvelage, T.1
  • 13
    • 38749153187 scopus 로고    scopus 로고
    • Rates and regulation of anaerobic ammonium oxidation and denitrification in the Black Sea
    • Jensen MM, Kuypers MMM, Lavik G, Thamdrup B (2008) Rates and regulation of anaerobic ammonium oxidation and denitrification in the Black Sea. Limnol Oceanogr 53:23-36.
    • (2008) Limnol Oceanogr , vol.53 , pp. 23-36
    • Jensen, M.M.1    Kuypers, M.M.M.2    Lavik, G.3    Thamdrup, B.4
  • 14
    • 84920901627 scopus 로고    scopus 로고
    • Oxygen at nanomolar levels reversibly suppresses process rates and gene expression in anammox and denitrification in the oxygen minimum zone off northern Chile
    • Dalsgaard T, et al. (2014) Oxygen at nanomolar levels reversibly suppresses process rates and gene expression in anammox and denitrification in the oxygen minimum zone off northern Chile. MBio 5(6):e01966.
    • (2014) MBio , vol.5 , Issue.6
    • Dalsgaard, T.1
  • 15
    • 0025675169 scopus 로고
    • Bacterial transformations of inorganic nitrogen in the oxygen-deficient waters of the Eastern Tropical South Pacific Ocean
    • Lipschultz F, et al. (1990) Bacterial transformations of inorganic nitrogen in the oxygen-deficient waters of the Eastern Tropical South Pacific Ocean. Deep Sea Res A 37:1513-1541.
    • (1990) Deep Sea Res A , vol.37 , pp. 1513-1541
    • Lipschultz, F.1
  • 16
    • 84861340985 scopus 로고    scopus 로고
    • Nitrite oxidation in the Namibian oxygen minimum zone
    • Füssel J, et al. (2012) Nitrite oxidation in the Namibian oxygen minimum zone. ISME J 6(6):1200-1209.
    • (2012) ISME J , vol.6 , Issue.6 , pp. 1200-1209
    • Füssel, J.1
  • 17
    • 84862011740 scopus 로고    scopus 로고
    • Quantification of ammonia oxidation rates and ammonia-oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean
    • Beman JM, Popp BN, Alford SE (2012) Quantification of ammonia oxidation rates and ammonia-oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean. Limnol Oceanogr 57:711-726.
    • (2012) Limnol Oceanogr , vol.57 , pp. 711-726
    • Beman, J.M.1    Popp, B.N.2    Alford, S.E.3
  • 18
    • 84947617917 scopus 로고    scopus 로고
    • Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone
    • Ganesh S, et al. (2015) Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone. ISME J 9(12):2682-2696.
    • (2015) ISME J , vol.9 , Issue.12 , pp. 2682-2696
    • Ganesh, S.1
  • 19
    • 83955161095 scopus 로고    scopus 로고
    • A critical assessment of the occurrence and extend of oxygen contamination during anaerobic incubations utilizing commercially available vials
    • De Brabandere L, Thamdrup B, Revsbech NP, Foadi R (2012) A critical assessment of the occurrence and extend of oxygen contamination during anaerobic incubations utilizing commercially available vials. J Microbiol Methods 88(1):147-154.
    • (2012) J Microbiol Methods , vol.88 , Issue.1 , pp. 147-154
    • De Brabandere, L.1    Thamdrup, B.2    Revsbech, N.P.3    Foadi, R.4
  • 20
    • 84934935659 scopus 로고    scopus 로고
    • LUMOS - A sensitive and reliable optode system for measuring dissolved oxygen in the nanomolar range
    • Lehner P, et al. (2015) LUMOS - A sensitive and reliable optode system for measuring dissolved oxygen in the nanomolar range. PLoS One 10(6):e0128125.
    • (2015) PLoS One , vol.10 , Issue.6
    • Lehner, P.1
  • 21
    • 68949146121 scopus 로고    scopus 로고
    • Determination of ultra-low oxygen concentrations in oxygen minimum zones by the STOX sensor
    • Revsbech NP, et al. (2009) Determination of ultra-low oxygen concentrations in oxygen minimum zones by the STOX sensor. Limnol Oceanogr Methods 7:371-381.
    • (2009) Limnol Oceanogr Methods , vol.7 , pp. 371-381
    • Revsbech, N.P.1
  • 22
    • 84859794545 scopus 로고    scopus 로고
    • Widespread functional anoxia in the oxygen minimum zone of the eastern South Pacific
    • Thamdrup B, Dalsgaard T, Revsbech NP (2012) Widespread functional anoxia in the oxygen minimum zone of the eastern South Pacific. Deep Sea Res Part I Oceanogr Res Pap 65:36-45.
    • (2012) Deep Sea Res Part I Oceanogr Res Pap , vol.65 , pp. 36-45
    • Thamdrup, B.1    Dalsgaard, T.2    Revsbech, N.P.3
  • 23
    • 84934902894 scopus 로고    scopus 로고
    • Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones
    • Tiano L, et al. (2014) Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones. Deep Sea Res Part 1 Oceanogr Res Pap 94:173-183.
    • (2014) Deep Sea Res Part 1 Oceanogr Res Pap , vol.94 , pp. 173-183
    • Tiano, L.1
  • 24
    • 78649710753 scopus 로고    scopus 로고
    • A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean coast
    • Canfield DE, et al. (2010) A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean coast. Science 330(6009):1375-1378.
    • (2010) Science , vol.330 , Issue.6009 , pp. 1375-1378
    • Canfield, D.E.1
  • 25
    • 85008949766 scopus 로고    scopus 로고
    • Enhanced metabolic versatility of planktonic sulfur-oxidizing γ-proteobacteria in an oxygen-deficient coastal ecosystem
    • Murillo AA, Ramírez-Flandes S, DeLong EF, Ulloa O (2014) Enhanced metabolic versatility of planktonic sulfur-oxidizing γ-proteobacteria in an oxygen-deficient coastal ecosystem. Front Mar Sci 1:18.
    • (2014) Front Mar Sci , vol.1 , pp. 18
    • Murillo, A.A.1    Ramírez-Flandes, S.2    DeLong, E.F.3    Ulloa, O.4
  • 26
    • 84861209819 scopus 로고    scopus 로고
    • Experimental incubations elicit profound changes in community transcription in OMZ bacterioplankton
    • Stewart FJ, et al. (2012) Experimental incubations elicit profound changes in community transcription in OMZ bacterioplankton. PLoS One 7(5):e37118.
    • (2012) PLoS One , vol.7 , Issue.5
    • Stewart, F.J.1
  • 28
    • 84882680692 scopus 로고    scopus 로고
    • Implications of nitrate and nitrite isotopic measurements for the mechanisms of nitrogen cycling in the Peru oxygen deficient zone
    • Casciotti KL, Buchwald C, McIlvin M (2013) Implications of nitrate and nitrite isotopic measurements for the mechanisms of nitrogen cycling in the Peru oxygen deficient zone. Deep Sea Res Part I Oceanogr Res Pap 80:78-93.
    • (2013) Deep Sea Res Part I Oceanogr Res Pap , vol.80 , pp. 78-93
    • Casciotti, K.L.1    Buchwald, C.2    McIlvin, M.3
  • 29
    • 34249862426 scopus 로고    scopus 로고
    • Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea
    • Lam P, et al. (2007) Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. Proc Natl Acad Sci USA 104(17):7104-7109.
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.17 , pp. 7104-7109
    • Lam, P.1
  • 30
    • 67649292381 scopus 로고    scopus 로고
    • Water masses in the Humboldt Current System: Properties, distribution, and the nitrate deficit as a chemical water mass tracer for Equatorial Subsurface Water off Chile
    • Silva N, Rojas N, Fedele A (2009) Water masses in the Humboldt Current System: properties, distribution, and the nitrate deficit as a chemical water mass tracer for Equatorial Subsurface Water off Chile. Deep Sea Res Part II Top Stud Oceanogr 56:992-1008.
    • (2009) Deep Sea Res Part II Top Stud Oceanogr , vol.56 , pp. 992-1008
    • Silva, N.1    Rojas, N.2    Fedele, A.3
  • 31
    • 84865453667 scopus 로고    scopus 로고
    • 2O consumption in the oxygen minimum zone of the eastern South Pacific
    • 2O consumption in the oxygen minimum zone of the eastern South Pacific. Biogeosciences 9:3205-3212.
    • (2012) Biogeosciences , vol.9 , pp. 3205-3212
    • Cornejo, M.1    Farías, L.2
  • 32
    • 0001084308 scopus 로고    scopus 로고
    • Population study of the filamentous sulfur bacteria Thioploca spp. off the Bay of Concepcion, Chile
    • Schulz HN, Strotmann B, Gallardo VA, Jørgensen BB (2000) Population study of the filamentous sulfur bacteria Thioploca spp. off the Bay of Concepcion, Chile. Mar Ecol Prog Ser 200:117-126.
    • (2000) Mar Ecol Prog Ser , vol.200 , pp. 117-126
    • Schulz, H.N.1    Strotmann, B.2    Gallardo, V.A.3    Jørgensen, B.B.4
  • 33
    • 84155164712 scopus 로고    scopus 로고
    • Temporal variability and phylogenetic characterization of planktonic anammox bacteria in the coastal upwellng ecosystem off central Chile
    • Galán A, Molina V, Belmar L, Ulloa O (2012) Temporal variability and phylogenetic characterization of planktonic anammox bacteria in the coastal upwellng ecosystem off central Chile. Prog Oceanogr 92-95:110-120.
    • (2012) Prog Oceanogr , vol.92-95 , pp. 110-120
    • Galán, A.1    Molina, V.2    Belmar, L.3    Ulloa, O.4
  • 34
    • 36048936970 scopus 로고    scopus 로고
    • Productivity cycles in the upwelling area off Concepcion: The importance of diatoms and bacterioplankton in the organic carbon flux
    • Montero P, et al. (2007) Productivity cycles in the upwelling area off Concepcion: The importance of diatoms and bacterioplankton in the organic carbon flux. Prog Oceanogr 75:518-530.
    • (2007) Prog Oceanogr , vol.75 , pp. 518-530
    • Montero, P.1
  • 35
    • 36048968152 scopus 로고    scopus 로고
    • Coastal upwelling and seasonal cycles that influence the water column over the continental shelf off central Chile
    • Sobarzo M, Bravo L, Donoso D, Garces-Vargas J, Schneider W (2007) Coastal upwelling and seasonal cycles that influence the water column over the continental shelf off central Chile. Prog Oceanogr 75:363-382.
    • (2007) Prog Oceanogr , vol.75 , pp. 363-382
    • Sobarzo, M.1    Bravo, L.2    Donoso, D.3    Garces-Vargas, J.4    Schneider, W.5
  • 37
    • 77956256740 scopus 로고    scopus 로고
    • High diversity of ammonia-oxidizing archaea in permanent and seasonal oxygen-deficient waters of the eastern South Pacific
    • Molina V, Belmar L, Ulloa O (2010) High diversity of ammonia-oxidizing archaea in permanent and seasonal oxygen-deficient waters of the eastern South Pacific. Environ Microbiol 12(9):2450-2465.
    • (2010) Environ Microbiol , vol.12 , Issue.9 , pp. 2450-2465
    • Molina, V.1    Belmar, L.2    Ulloa, O.3
  • 38
    • 26844541457 scopus 로고    scopus 로고
    • Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
    • Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102(41):14683-14688.
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.41 , pp. 14683-14688
    • Francis, C.A.1    Roberts, K.J.2    Beman, J.M.3    Santoro, A.E.4    Oakley, B.B.5
  • 39
    • 70350052417 scopus 로고    scopus 로고
    • Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
    • Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA (2009) Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 461(7266):976-979.
    • (2009) Nature , vol.461 , Issue.7266 , pp. 976-979
    • Martens-Habbena, W.1    Berube, P.M.2    Urakawa, H.3    De La Torre, J.R.4    Stahl, D.A.5
  • 40
    • 84921744487 scopus 로고    scopus 로고
    • Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": An ammonia-oxidizing archaeon from the open ocean
    • Santoro AE, et al. (2015) Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": An ammonia-oxidizing archaeon from the open ocean. Proc Natl Acad Sci USA 112(4):1173-1178.
    • (2015) Proc Natl Acad Sci USA , vol.112 , Issue.4 , pp. 1173-1178
    • Santoro, A.E.1
  • 41
    • 84921612289 scopus 로고    scopus 로고
    • Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea
    • Kamanda Ngugi D, et al. (2015) Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea. ISME J 9(2):396-411.
    • (2015) ISME J , vol.9 , Issue.2 , pp. 396-411
    • Kamanda Ngugi, D.1
  • 42
    • 84925276427 scopus 로고    scopus 로고
    • Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth
    • Nunoura T, et al. (2015) Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth. Proc Natl Acad Sci USA 112(11):E1230-E1236.
    • (2015) Proc Natl Acad Sci USA , vol.112 , Issue.11 , pp. E1230-E1236
    • Nunoura, T.1
  • 43
    • 73349133709 scopus 로고    scopus 로고
    • Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia
    • Zaikova E, et al. (2010) Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia. Environ Microbiol 12(1):172-191.
    • (2010) Environ Microbiol , vol.12 , Issue.1 , pp. 172-191
    • Zaikova, E.1
  • 44
    • 80054098909 scopus 로고    scopus 로고
    • Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific
    • Belmar L, Molina V, Ulloa O (2011) Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific. FEMS Microbiol Ecol 78(2):314-326.
    • (2011) FEMS Microbiol Ecol , vol.78 , Issue.2 , pp. 314-326
    • Belmar, L.1    Molina, V.2    Ulloa, O.3
  • 45
    • 84951335346 scopus 로고    scopus 로고
    • Complete nitrification by Nitrospira bacteria
    • Daims H, et al. (2015) Complete nitrification by Nitrospira bacteria. Nature 528(7583):504-509.
    • (2015) Nature , vol.528 , Issue.7583 , pp. 504-509
    • Daims, H.1
  • 46
    • 63849329587 scopus 로고    scopus 로고
    • Revising the nitrogen cycle in the Peruvian oxygen minimum zone
    • Lam P, et al. (2009) Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci USA 106(12):4752-4757.
    • (2009) Proc Natl Acad Sci USA , vol.106 , Issue.12 , pp. 4752-4757
    • Lam, P.1
  • 47
    • 77952739182 scopus 로고    scopus 로고
    • Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
    • Walker CB, et al. (2010) Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proc Natl Acad Sci USA 107(19):8818-8823.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.19 , pp. 8818-8823
    • Walker, C.B.1
  • 48
    • 0017858515 scopus 로고
    • Oxygen-limited continuous culture and respiratory energy conservation in Escherichia coli
    • Rice CW, Hempfling WP (1978) Oxygen-limited continuous culture and respiratory energy conservation in Escherichia coli. J Bacteriol 134(1):115-124.
    • (1978) J Bacteriol , vol.134 , Issue.1 , pp. 115-124
    • Rice, C.W.1    Hempfling, W.P.2
  • 49
    • 84886720409 scopus 로고    scopus 로고
    • Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean
    • Beman JM, Leilei Shih J, Popp BN (2013) Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean. ISME J 7(11):2192-2205.
    • (2013) ISME J , vol.7 , Issue.11 , pp. 2192-2205
    • Beman, J.M.1    Leilei Shih, J.2    Popp, B.N.3
  • 50
    • 84913530376 scopus 로고    scopus 로고
    • Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ∼36°S)
    • Levipan HA, Molina V, Fernandez C (2014) Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ∼36°S). Environ Microbiol Rep 6(6):565-573.
    • (2014) Environ Microbiol Rep , vol.6 , Issue.6 , pp. 565-573
    • Levipan, H.A.1    Molina, V.2    Fernandez, C.3
  • 51
    • 84875875462 scopus 로고    scopus 로고
    • The genome of Nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer
    • Lücker S, Nowka B, Rattei T, Spieck E, Daims H (2013) The genome of Nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer. Front Microbiol 4:27.
    • (2013) Front Microbiol , vol.4 , pp. 27
    • Lücker, S.1    Nowka, B.2    Rattei, T.3    Spieck, E.4    Daims, H.5
  • 52
    • 0029670068 scopus 로고    scopus 로고
    • A high-affinity cbb3-type cytochrome oxidase terminates the symbiosis-specific respiratory chain of Bradyrhizobium japonicum
    • Preisig O, Zufferey R, Thöny-Meyer L, Appleby CA, Hennecke H (1996) A high-affinity cbb3-type cytochrome oxidase terminates the symbiosis-specific respiratory chain of Bradyrhizobium japonicum. J Bacteriol 178(6):1532-1538.
    • (1996) J Bacteriol , vol.178 , Issue.6 , pp. 1532-1538
    • Preisig, O.1    Zufferey, R.2    Thöny-Meyer, L.3    Appleby, C.A.4    Hennecke, H.5
  • 53
    • 79960581689 scopus 로고    scopus 로고
    • 2 environments
    • 2 environments. Proc Natl Acad Sci USA 108(34):14109-14114.
    • (2011) Proc Natl Acad Sci USA , vol.108 , Issue.34 , pp. 14109-14114
    • Han, H.1
  • 54
    • 84876015681 scopus 로고    scopus 로고
    • How to make a living from anaerobic ammonium oxidation
    • Kartal B, et al. (2013) How to make a living from anaerobic ammonium oxidation. FEMS Microbiol Rev 37(3):428-461.
    • (2013) FEMS Microbiol Rev , vol.37 , Issue.3 , pp. 428-461
    • Kartal, B.1
  • 55
    • 84908365455 scopus 로고    scopus 로고
    • Temporal dynamics of nitrogen loss in the coastal upwelling ecosystem off central Chile: Evidence of autotrophic denitrification through sulfide oxidation
    • Galán A, Faúndez J, Thamdrup B, Santibáñez JF, Farías L (2014) Temporal dynamics of nitrogen loss in the coastal upwelling ecosystem off central Chile: Evidence of autotrophic denitrification through sulfide oxidation. Limnol Oceanogr 59(6):1865-1878.
    • (2014) Limnol Oceanogr , vol.59 , Issue.6 , pp. 1865-1878
    • Galán, A.1    Faúndez, J.2    Thamdrup, B.3    Santibáñez, J.F.4    Farías, L.5
  • 56
    • 84876311525 scopus 로고    scopus 로고
    • Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification
    • Casciotti KL, Buchwald C (2012) Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification. Front Microbiol 3:356.
    • (2012) Front Microbiol , vol.3 , pp. 356
    • Casciotti, K.L.1    Buchwald, C.2
  • 57
    • 0031456471 scopus 로고    scopus 로고
    • Cell biology and molecular basis of denitrification
    • Zumft WG (1997) Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev 61(4):533-616.
    • (1997) Microbiol Mol Biol Rev , vol.61 , Issue.4 , pp. 533-616
    • Zumft, W.G.1
  • 58
    • 84941761213 scopus 로고    scopus 로고
    • Aerobic microbial respiration in oceanic oxygen minimum zones
    • Kalvelage T, et al. (2015) Aerobic microbial respiration in oceanic oxygen minimum zones. PLoS One 10(7):e0133526.
    • (2015) PLoS One , vol.10 , Issue.7
    • Kalvelage, T.1
  • 59
    • 84907874035 scopus 로고    scopus 로고
    • Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone
    • De Brabandere L, et al. (2014) Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone. Environ Microbiol 16(10):3041-3054.
    • (2014) Environ Microbiol , vol.16 , Issue.10 , pp. 3041-3054
    • De Brabandere, L.1
  • 61
  • 62
    • 84934937416 scopus 로고    scopus 로고
    • A new highly sensitive method to assess respiration rates and kinetics of natural planktonic communities by use of the switchable trace oxygen sensor and reduced oxygen concentrations
    • Tiano L, Garcia-Robledo E, Revsbech NP (2014) A new highly sensitive method to assess respiration rates and kinetics of natural planktonic communities by use of the switchable trace oxygen sensor and reduced oxygen concentrations. PLoS One 9(8):e105399.
    • (2014) PLoS One , vol.9 , Issue.8
    • Tiano, L.1    Garcia-Robledo, E.2    Revsbech, N.P.3
  • 63
    • 0027100003 scopus 로고
    • Oxygen solubility in seawater better fitting equations
    • Garcia HE, Gordon LI (1992) Oxygen solubility in seawater better fitting equations. Limnol Oceanogr 37(6):1307-1312.
    • (1992) Limnol Oceanogr , vol.37 , Issue.6 , pp. 1307-1312
    • Garcia, H.E.1    Gordon, L.I.2
  • 64
    • 84986767568 scopus 로고
    • An oxygen microelectrode with a guard cathode
    • Revsbech NP (1989) An oxygen microelectrode with a guard cathode. Limnol Oceanogr 34:472-476.
    • (1989) Limnol Oceanogr , vol.34 , pp. 472-476
    • Revsbech, N.P.1
  • 65
    • 24644434320 scopus 로고    scopus 로고
    • Chemical conversion of nitrate and nitrite to nitrous oxide for nitrogen and oxygen isotopic analysis in freshwater and seawater
    • McIlvin MR, Altabet MA (2005) Chemical conversion of nitrate and nitrite to nitrous oxide for nitrogen and oxygen isotopic analysis in freshwater and seawater. Anal Chem 77(17):5589-5595.
    • (2005) Anal Chem , vol.77 , Issue.17 , pp. 5589-5595
    • McIlvin, M.R.1    Altabet, M.A.2
  • 67
    • 85052489011 scopus 로고    scopus 로고
    • Large volume (20L+) filtration of coastal seawater samples
    • Walsh DA, Zaikova E, Hallam SJ (2009) Large volume (20L+) filtration of coastal seawater samples. J Vis Exp 28:e1161.
    • (2009) J Vis Exp , vol.28 , pp. e1161
    • Walsh, D.A.1    Zaikova, E.2    Hallam, S.J.3
  • 68
    • 31544483932 scopus 로고    scopus 로고
    • Community genomics among stratified microbial assemblages in the ocean's interior
    • DeLong EF, et al. (2006) Community genomics among stratified microbial assemblages in the ocean's interior. Science 311(5760):496-503.
    • (2006) Science , vol.311 , Issue.5760 , pp. 496-503
    • DeLong, E.F.1
  • 69
    • 80055103249 scopus 로고    scopus 로고
    • DNA extraction from 0.22 μM Sterivex filters and cesium chloride density gradient centrifugation
    • Wright JJ, Lee S, Zaikova E, Walsh DA, Hallam SJ (2009) DNA extraction from 0.22 μM Sterivex filters and cesium chloride density gradient centrifugation. J Vis Exp (31):e1352.
    • (2009) J Vis Exp , vol.31 , pp. e1352
    • Wright, J.J.1    Lee, S.2    Zaikova, E.3    Walsh, D.A.4    Hallam, S.J.5
  • 70
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26(19):2460-2461.
    • (2010) Bioinformatics , vol.26 , Issue.19 , pp. 2460-2461
    • Edgar, R.C.1
  • 72
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso JG, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7(5):335-336.
    • (2010) Nat Methods , vol.7 , Issue.5 , pp. 335-336
    • Caporaso, J.G.1


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