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Volumn 112, Issue 11, 2015, Pages E1230-E1236

Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth

Author keywords

Challenger deep; Hadal; Niche separation; Nitrification; Trench

Indexed keywords

AMMONIA; DISSOLVED OXYGEN; NITRATE; ORGANIC MATTER; SEA WATER; SMALL SUBUNIT RIBOSOMAL RNA; RIBOSOME RNA;

EID: 84925276427     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1421816112     Document Type: Article
Times cited : (247)

References (62)
  • 1
    • 70349959731 scopus 로고    scopus 로고
    • Effects of phytoplankton community on production, size and export of large aggregates: A world-ocean analysis
    • Guidi L, et al. (2009) Effects of phytoplankton community on production, size and export of large aggregates: A world-ocean analysis. Limnol Oceanogr 54(6):1951-1963.
    • (2009) Limnol Oceanogr , vol.54 , Issue.6 , pp. 1951-1963
    • Guidi, L.1
  • 2
    • 77952418511 scopus 로고    scopus 로고
    • Role of macroscopic particles in deep-sea oxygen consumption
    • Bochdansky AB, van Aken HM, Herndl GJ (2010) Role of macroscopic particles in deep-sea oxygen consumption. Proc Natl Acad Sci USA 107(18):8287-8291.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.18 , pp. 8287-8291
    • Bochdansky, A.B.1    Van Aken, H.M.2    Herndl, G.J.3
  • 3
    • 84883404871 scopus 로고    scopus 로고
    • Microbial control of the dark end of the biological pump
    • Herndl GJ, Reinthaler T (2013) Microbial control of the dark end of the biological pump. Nat Geosci 6(9):718-724.
    • (2013) Nat Geosci , vol.6 , Issue.9 , pp. 718-724
    • Herndl, G.J.1    Reinthaler, T.2
  • 4
    • 84875340446 scopus 로고    scopus 로고
    • Large-scale geographical variation in prokaryotic abundance and production in meso-and bathypelagic zones of the central Pacific and Southern Ocean
    • Yokokawa T, Yang Y, Motegi C, Nagata T (2013) Large-scale geographical variation in prokaryotic abundance and production in meso-and bathypelagic zones of the central Pacific and Southern Ocean. Limnol Oceanogr 58(1):61-73.
    • (2013) Limnol Oceanogr , vol.58 , Issue.1 , pp. 61-73
    • Yokokawa, T.1    Yang, Y.2    Motegi, C.3    Nagata, T.4
  • 6
    • 80052479893 scopus 로고    scopus 로고
    • Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean
    • Swan BK, et al. (2011) Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean. Science 333(6047):1296-1300.
    • (2011) Science , vol.333 , Issue.6047 , pp. 1296-1300
    • Swan, B.K.1
  • 8
    • 22844452602 scopus 로고    scopus 로고
    • Deep and bottom currents in the challenger deep, measured with super-deep current meters
    • Taira K, Kitagawa S, Yamashiro T, Yanagimoto D (2004) Deep and bottom currents in the challenger deep, measured with super-deep current meters. J Oceanogr 60(6): 919-926.
    • (2004) J Oceanogr , vol.60 , Issue.6 , pp. 919-926
    • Taira, K.1    Kitagawa, S.2    Yamashiro, T.3    Yanagimoto, D.4
  • 9
    • 24144441820 scopus 로고    scopus 로고
    • Deep CTD casts in the challenger deep, Mariana Trench
    • Taira K, Yanagimoto D, Kitagawa S (2005) Deep CTD casts in the Challenger Deep, Mariana Trench. J Oceanogr 61(3):447-454.
    • (2005) J Oceanogr , vol.61 , Issue.3 , pp. 447-454
    • Taira, K.1    Yanagimoto, D.2    Kitagawa, S.3
  • 10
    • 77954145249 scopus 로고    scopus 로고
    • Emerging concepts on microbial processes in the bathypelagic ocean - Ecology, biogeochemistry, and genomics
    • Nagata T, et al. (2010) Emerging concepts on microbial processes in the bathypelagic ocean-Ecology, biogeochemistry, and genomics. Deep Sea Res Part II Top Stud Oceanogr 57(16):1519-1536.
    • (2010) Deep Sea Res Part II Top Stud Oceanogr , vol.57 , Issue.16 , pp. 1519-1536
    • Nagata, T.1
  • 11
    • 75649131083 scopus 로고    scopus 로고
    • Microbial life in the trenches
    • Bartlett DH (2009) Microbial life in the trenches. MTS J 43(5):128-131.
    • (2009) MTS J , vol.43 , Issue.5 , pp. 128-131
    • Bartlett, D.H.1
  • 13
    • 84875776251 scopus 로고    scopus 로고
    • High rates of microbial carbon turnover in sediments in the deepest oceanic trench on Earth
    • Glud RN, et al. (2013) High rates of microbial carbon turnover in sediments in the deepest oceanic trench on Earth. Nat Geosci 6(4):284-288.
    • (2013) Nat Geosci , vol.6 , Issue.4 , pp. 284-288
    • Glud, R.N.1
  • 14
    • 0030745477 scopus 로고    scopus 로고
    • Microbial flora in the deepest sea mud of the Mariana Trench
    • Takami H, Inoue A, Fuji F, Horikoshi K (1997) Microbial flora in the deepest sea mud of the Mariana Trench. FEMS Microbiol Lett 152(2):279-285.
    • (1997) FEMS Microbiol Lett , vol.152 , Issue.2 , pp. 279-285
    • Takami, H.1    Inoue, A.2    Fuji, F.3    Horikoshi, K.4
  • 15
    • 0031980181 scopus 로고    scopus 로고
    • Extremely barophilic bacteria isolated from the Mariana Trench, Challenger Deep, at a depth of 11,000 meters
    • Kato C, et al. (1998) Extremely barophilic bacteria isolated from the Mariana Trench, Challenger Deep, at a depth of 11,000 meters. Appl Environ Microbiol 64(4):1510-1513.
    • (1998) Appl Environ Microbiol , vol.64 , Issue.4 , pp. 1510-1513
    • Kato, C.1
  • 16
    • 0037095839 scopus 로고    scopus 로고
    • Morphology and origin of the Challenger Deep in the Southern Mariana Trench
    • Fujioka K, Okino K, Kanamatsu T, Ohara Y (2002) Morphology and origin of the Challenger Deep in the Southern Mariana Trench. Geophy Res Let 29(10):10-1-10-4.
    • (2002) Geophy Res Let , vol.29 , Issue.10 , pp. 101-104
    • Fujioka, K.1    Okino, K.2    Kanamatsu, T.3    Ohara, Y.4
  • 17
    • 84874520341 scopus 로고    scopus 로고
    • Metagenomic analysis of viral communities in (hado)pelagic sediments
    • Yoshida M, Takaki Y, Eitoku M, Nunoura T, Takai K (2013) Metagenomic analysis of viral communities in (hado)pelagic sediments. PLoS ONE 8(2):e57271.
    • (2013) PLoS ONE , vol.8 , Issue.2
    • Yoshida, M.1    Takaki, Y.2    Eitoku, M.3    Nunoura, T.4    Takai, K.5
  • 18
    • 0017931587 scopus 로고
    • Measurements of water characteristics at depths greater than 10 km in the Marianas Trench
    • Mantyla AW, Reid JL (1978) Measurements of water characteristics at depths greater than 10 km in the Marianas Trench. Deep-Sea Res 25(2):169-173.
    • (1978) Deep-Sea Res , vol.25 , Issue.2 , pp. 169-173
    • Mantyla, A.W.1    Reid, J.L.2
  • 19
    • 67649658024 scopus 로고    scopus 로고
    • The dual isotopes of deep nitrate as a constraint on the cycle and budget of oceanic fixed nitrogen
    • Sigman DM, et al. (2009) The dual isotopes of deep nitrate as a constraint on the cycle and budget of oceanic fixed nitrogen. Deep Sea Res Part I Oceanogr Res Pap 56(9): 1419-1439.
    • (2009) Deep Sea Res Part I Oceanogr Res Pap , vol.56 , Issue.9 , pp. 1419-1439
    • Sigman, D.M.1
  • 20
    • 27744438187 scopus 로고    scopus 로고
    • Proteorhodopsin in the ubiquitous marine bacterium SAR11
    • Giovannoni SJ, et al. (2005) Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature 438(7064):82-85.
    • (2005) Nature , vol.438 , Issue.7064 , pp. 82-85
    • Giovannoni, S.J.1
  • 21
    • 33846238031 scopus 로고    scopus 로고
    • Light stimulates growth of proteorhodopsin-containing marine Flavobacteria
    • Gómez-Consarnau L, et al. (2007) Light stimulates growth of proteorhodopsin-containing marine Flavobacteria. Nature 445(7124):210-213.
    • (2007) Nature , vol.445 , Issue.7124 , pp. 210-213
    • Gómez-Consarnau, L.1
  • 22
    • 84883136008 scopus 로고    scopus 로고
    • Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria
    • Ghai R, Mizuno CM, Picazo A, Camacho A, Rodriguez-Valera F (2013) Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria. Sci Rep 3:2471.
    • (2013) Sci Rep , vol.3 , pp. 2471
    • Ghai, R.1    Mizuno, C.M.2    Picazo, A.3    Camacho, A.4    Rodriguez-Valera, F.5
  • 23
    • 80054732674 scopus 로고    scopus 로고
    • Efficient de novo assembly of single-cell bacterial genomes from short-read data sets
    • Chitsaz H, et al. (2011) Efficient de novo assembly of single-cell bacterial genomes from short-read data sets. Nat Biotechnol 29(10):915-921.
    • (2011) Nat Biotechnol , vol.29 , Issue.10 , pp. 915-921
    • Chitsaz, H.1
  • 24
    • 84891624289 scopus 로고    scopus 로고
    • Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics
    • Sheik CS, Jain S, Dick GJ (2014) Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics. Environ Microbiol 16(1):304-317.
    • (2014) Environ Microbiol , vol.16 , Issue.1 , pp. 304-317
    • Sheik, C.S.1    Jain, S.2    Dick, G.J.3
  • 25
    • 84892979863 scopus 로고    scopus 로고
    • Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle
    • Wright JJ, et al. (2014) Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle. ISME J 8(2):455-468.
    • (2014) ISME J , vol.8 , Issue.2 , pp. 455-468
    • Wright, J.J.1
  • 26
    • 51649084234 scopus 로고    scopus 로고
    • Revealing the uncultivated majority: Combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands
    • Chen Y, et al. (2008) Revealing the uncultivated majority: Combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environ Microbiol 10(10):2609-2622.
    • (2008) Environ Microbiol , vol.10 , Issue.10 , pp. 2609-2622
    • Chen, Y.1
  • 27
    • 77956095528 scopus 로고    scopus 로고
    • Whole-community genome amplification (WCGA) leads to compositional bias in methane-oxidizing communities as assessed by pmoA-based microarray analyses and QPCR
    • Bodelier PLE, Kamst M, Meima-Franke M, Stralis-Pavese N, Bodrossy L (2009) Whole-community genome amplification (WCGA) leads to compositional bias in methane-oxidizing communities as assessed by pmoA-based microarray analyses and QPCR. Environ Microbiol Rep 1(5):434-441.
    • (2009) Environ Microbiol Rep , vol.1 , Issue.5 , pp. 434-441
    • Bodelier, P.L.E.1    Kamst, M.2    Meima-Franke, M.3    Stralis-Pavese, N.4    Bodrossy, L.5
  • 28
    • 84876485055 scopus 로고    scopus 로고
    • Archaeal amoA gene diversity points to distinct biogeography of ammonia-oxidizing Crenarchaeota in the ocean
    • Sintes E, Bergauer K, De Corte D, Yokokawa T, Herndl GJ (2013) Archaeal amoA gene diversity points to distinct biogeography of ammonia-oxidizing Crenarchaeota in the ocean. Environ Microbiol 15(5):1647-1658.
    • (2013) Environ Microbiol , vol.15 , Issue.5 , pp. 1647-1658
    • Sintes, E.1    Bergauer, K.2    De Corte, D.3    Yokokawa, T.4    Herndl, G.J.5
  • 29
    • 34250613083 scopus 로고    scopus 로고
    • Kinetic characterisation of an enriched Nitrospira culture with comparison to Nitrobacter
    • Blackburne R, Vadivelu VM, Yuan Z, Keller J (2007) Kinetic characterisation of an enriched Nitrospira culture with comparison to Nitrobacter . Water Res 41(14): 3033-3042.
    • (2007) Water Res , vol.41 , Issue.14 , pp. 3033-3042
    • Blackburne, R.1    Vadivelu, V.M.2    Yuan, Z.3    Keller, J.4
  • 30
    • 70350052417 scopus 로고    scopus 로고
    • Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
    • Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA (2009) Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 461(7266):976-979.
    • (2009) Nature , vol.461 , Issue.7266 , pp. 976-979
    • Martens-Habbena, W.1    Berube, P.M.2    Urakawa, H.3    De La Torre, J.R.4    Stahl, D.A.5
  • 31
    • 84855511258 scopus 로고    scopus 로고
    • Differential photoinhibition of bacterial and archaeal ammonia oxidation
    • Merbt SN, et al. (2012) Differential photoinhibition of bacterial and archaeal ammonia oxidation. FEMS Microbiol Lett 327(1):41-46.
    • (2012) FEMS Microbiol Lett , vol.327 , Issue.1 , pp. 41-46
    • Merbt, S.N.1
  • 32
    • 84855518132 scopus 로고    scopus 로고
    • Niche specialization of terrestrial archaeal ammonia oxidizers
    • Gubry-Rangin C, et al. (2011) Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci USA 108(52):21206-21211.
    • (2011) Proc Natl Acad Sci USA , vol.108 , Issue.52 , pp. 21206-21211
    • Gubry-Rangin, C.1
  • 33
    • 52949134066 scopus 로고    scopus 로고
    • Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary
    • Mosier AC, Francis CA (2008) Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary. Environ Microbiol 10(11): 3002-3016.
    • (2008) Environ Microbiol , vol.10 , Issue.11 , pp. 3002-3016
    • Mosier, A.C.1    Francis, C.A.2
  • 34
    • 34247847886 scopus 로고    scopus 로고
    • Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre
    • Mincer TJ, et al. (2007) Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre. Environ Microbiol 9(5):1162-1175.
    • (2007) Environ Microbiol , vol.9 , Issue.5 , pp. 1162-1175
    • Mincer, T.J.1
  • 35
    • 78049432317 scopus 로고    scopus 로고
    • Activity, abundance and diversity of nitrifying archaea and bacteria in the central California current
    • Santoro AE, Casciotti KL, Francis CA (2010) Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environ Microbiol 12(7):1989-2006.
    • (2010) Environ Microbiol , vol.12 , Issue.7 , pp. 1989-2006
    • Santoro, A.E.1    Casciotti, K.L.2    Francis, C.A.3
  • 36
    • 84861340985 scopus 로고    scopus 로고
    • Nitrite oxidation in the Namibian oxygen minimum zone
    • Füssel J, et al. (2012) Nitrite oxidation in the Namibian oxygen minimum zone. ISME J 6(6):1200-1209.
    • (2012) ISME J , vol.6 , Issue.6 , pp. 1200-1209
    • Füssel, J.1
  • 37
    • 69949098191 scopus 로고    scopus 로고
    • Complex nitrogen cycling in the sponge Geodia barretti
    • Hoffmann F, et al. (2009) Complex nitrogen cycling in the sponge Geodia barretti. Environ Microbiol 11(9):2228-2243.
    • (2009) Environ Microbiol , vol.11 , Issue.9 , pp. 2228-2243
    • Hoffmann, F.1
  • 38
    • 77954731912 scopus 로고    scopus 로고
    • Enrichment and physiological characterization of a novel Nitrospira-like bacterium obtained from a marine sponge
    • Off S, Alawi M, Spieck E (2010) Enrichment and physiological characterization of a novel Nitrospira-like bacterium obtained from a marine sponge. Appl Environ Microbiol 76(14):4640-4646.
    • (2010) Appl Environ Microbiol , vol.76 , Issue.14 , pp. 4640-4646
    • Off, S.1    Alawi, M.2    Spieck, E.3
  • 39
    • 84884250601 scopus 로고    scopus 로고
    • Molecular biological and isotopic biogeochemical prognoses of the nitrification-driven dynamic microbial nitrogen cycle in hadopelagic sediments
    • Nunoura T, et al. (2013) Molecular biological and isotopic biogeochemical prognoses of the nitrification-driven dynamic microbial nitrogen cycle in hadopelagic sediments. Environ Microbiol 15(11):3087-3107.
    • (2013) Environ Microbiol , vol.15 , Issue.11 , pp. 3087-3107
    • Nunoura, T.1
  • 40
    • 61649112203 scopus 로고    scopus 로고
    • Evidence of prokaryotic metabolism on suspended particulate organic matter in the dark waters of the subtropical North Atlantic
    • Baltar F, et al. (2009) Evidence of prokaryotic metabolism on suspended particulate organic matter in the dark waters of the subtropical North Atlantic. Limnol Oceanogr 54(1):182-193.
    • (2009) Limnol Oceanogr , vol.54 , Issue.1 , pp. 182-193
    • Baltar, F.1
  • 41
    • 67949124536 scopus 로고    scopus 로고
    • Microbial oceanography of the dark ocean's pelagic realm
    • Aristegui J, Gasol JM, Duarte CM, Herndl GJ (2009) Microbial oceanography of the dark ocean's pelagic realm. Limnol Oceanogr 54(5):1501-1529.
    • (2009) Limnol Oceanogr , vol.54 , Issue.5 , pp. 1501-1529
    • Aristegui, J.1    Gasol, J.M.2    Duarte, C.M.3    Herndl, G.J.4
  • 42
    • 84859760032 scopus 로고    scopus 로고
    • Disturbance of deep-sea environments induced by the M9.0 Tohoku earthquake
    • Kawagucci S, et al. (2012) Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake. Sci Rep 2:270.
    • (2012) Sci Rep , vol.2 , pp. 270
    • Kawagucci, S.1
  • 43
    • 0033676260 scopus 로고    scopus 로고
    • REEs and Mn/Al ratio of settling particles: Horizontal transport of particulate material in the northern Japan Trench
    • Otosaka S, Noriki S (2000) REEs and Mn/Al ratio of settling particles: Horizontal transport of particulate material in the northern Japan Trench. Mar Chem 72(2-4): 329-342.
    • (2000) Mar Chem , vol.72 , Issue.2-4 , pp. 329-342
    • Otosaka, S.1    Noriki, S.2
  • 44
    • 75649093680 scopus 로고    scopus 로고
    • The ABISMO mud and water sampling ROV for surveys at 11,000 m depth
    • Yoshida H, et al. (2009) The ABISMO mud and water sampling ROV for surveys at 11,000 m depth. MTS J 43(5):87-96.
    • (2009) MTS J , vol.43 , Issue.5 , pp. 87-96
    • Yoshida, H.1
  • 45
    • 0035449489 scopus 로고    scopus 로고
    • A bacterial method for the nitrogen isotopic analysis of nitrate in seawater and freshwater
    • Sigman DM, et al. (2001) A bacterial method for the nitrogen isotopic analysis of nitrate in seawater and freshwater. Anal Chem 73(17):4145-4153.
    • (2001) Anal Chem , vol.73 , Issue.17 , pp. 4145-4153
    • Sigman, D.M.1
  • 46
    • 0036787547 scopus 로고    scopus 로고
    • Measurement of the oxygen isotopic composition of nitrate in seawater and freshwater using the denitrifier method
    • Casciotti KL, Sigman DM, Hastings MG, Böhlke JK, Hilkert A (2002) Measurement of the oxygen isotopic composition of nitrate in seawater and freshwater using the denitrifier method. Anal Chem 74(19):4905-4912.
    • (2002) Anal Chem , vol.74 , Issue.19 , pp. 4905-4912
    • Casciotti, K.L.1    Sigman, D.M.2    Hastings, M.G.3    Böhlke, J.K.4    Hilkert, A.5
  • 47
    • 79952158168 scopus 로고    scopus 로고
    • Technical updates to the bacterial method for nitrate isotopic analyses
    • McIlvin MR, Casciotti KL (2011) Technical updates to the bacterial method for nitrate isotopic analyses. Anal Chem 83(5):1850-1856.
    • (2011) Anal Chem , vol.83 , Issue.5 , pp. 1850-1856
    • McIlvin, M.R.1    Casciotti, K.L.2
  • 50
    • 84871165198 scopus 로고    scopus 로고
    • Microbial diversity in deep-sea methane seep sediments presented by SSU rRNA gene tag sequencing
    • Nunoura T, et al. (2012) Microbial diversity in deep-sea methane seep sediments presented by SSU rRNA gene tag sequencing. Microbes Environ 27(4):382-390.
    • (2012) Microbes Environ , vol.27 , Issue.4 , pp. 382-390
    • Nunoura, T.1
  • 51
    • 33644606606 scopus 로고    scopus 로고
    • FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries
    • Yu Y, Breitbart M, McNairnie P, Rohwer F (2006) FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries. BMC Bioinformatics 7:57.
    • (2006) BMC Bioinformatics , vol.7 , pp. 57
    • Yu, Y.1    Breitbart, M.2    McNairnie, P.3    Rohwer, F.4
  • 52
    • 69549112742 scopus 로고    scopus 로고
    • Accurate determination of microbial diversity from 454 pyrosequencing data
    • Quince C, et al. (2009) Accurate determination of microbial diversity from 454 pyrosequencing data. Nat Methods 6(9):639-641.
    • (2009) Nat Methods , vol.6 , Issue.9 , pp. 639-641
    • Quince, C.1
  • 53
    • 72949107142 scopus 로고    scopus 로고
    • Introducing MOTHUR: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss PD, et al. (2009) Introducing MOTHUR: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75(23):7537-7541.
    • (2009) Appl Environ Microbiol , vol.75 , Issue.23 , pp. 7537-7541
    • Schloss, P.D.1
  • 54
    • 83355173006 scopus 로고    scopus 로고
    • Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies
    • Schloss PD, Gevers D, Westcott SL (2011) Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies. PLoS ONE 6(12):e27310.
    • (2011) PLoS ONE , vol.6 , Issue.12
    • Schloss, P.D.1    Gevers, D.2    Westcott, S.L.3
  • 56
    • 84891813947 scopus 로고    scopus 로고
    • The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks
    • Database issue
    • Yilmaz P, et al. (2014) The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks. Nucleic Acids Res 42(Database issue, D1):D643-D648.
    • (2014) Nucleic Acids Res , vol.42 , Issue.D1 , pp. D643-D648
    • Yilmaz, P.1
  • 57
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso JG, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7(5):335-336.
    • (2010) Nat Methods , vol.7 , Issue.5 , pp. 335-336
    • Caporaso, J.G.1
  • 58
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
    • Lozupone C, Hamady M, Knight R (2006) UniFrac-An online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7(1):371.
    • (2006) BMC Bioinformatics , vol.7 , Issue.1 , pp. 371
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 59
    • 84864134721 scopus 로고    scopus 로고
    • SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
    • Pruesse E, Peplies J, Glöckner FO (2012) SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics 28(14):1823-1829.
    • (2012) Bioinformatics , vol.28 , Issue.14 , pp. 1823-1829
    • Pruesse, E.1    Peplies, J.2    Glöckner, F.O.3
  • 60
    • 36448991500 scopus 로고    scopus 로고
    • Clustal W and clustal X version 2.0
    • Larkin MA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948.
    • (2007) Bioinformatics , vol.23 , Issue.21 , pp. 2947-2948
    • Larkin, M.A.1
  • 61
    • 34548502489 scopus 로고    scopus 로고
    • Experimental demonstration of chaotic instability in biological nitrification
    • Graham DW, et al. (2007) Experimental demonstration of chaotic instability in biological nitrification. ISME J 1(5):385-393.
    • (2007) ISME J , vol.1 , Issue.5 , pp. 385-393
    • Graham, D.W.1
  • 62
    • 0029798568 scopus 로고    scopus 로고
    • Rhodothermus obamensis sp. nov., a modern lineage of extremely thermophilic marine bacteria
    • Sako Y, Takai K, Ishida Y, Uchida A, Katayama Y (1996) Rhodothermus obamensis sp. nov., a modern lineage of extremely thermophilic marine bacteria. Int J Syst Bacteriol 46(4):1099-1104.
    • (1996) Int J Syst Bacteriol , vol.46 , Issue.4 , pp. 1099-1104
    • Sako, Y.1    Takai, K.2    Ishida, Y.3    Uchida, A.4    Katayama, Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.