Rhinovirus species and clinical features in children hospitalised with pneumonia from Mozambique

Tropical Medicine and International Health

Volumn 21, Issue 9, 2016, Pages 1171-1180

  Annamalay, Alicia A ^a,b   Lanaspa, Miguel ^c,d   Khoo, Siew Kim ^a,b   Madrid, Lola ^c,d   Acácio, Sozinho ^c   Zhang, Guicheng ^a,e   Laing, Ingrid A ^a,b   Gern, James ^f   Goldblatt, Jack ^a   Bizzintino, Joelene ^a,b   Lehmann, Deborah ^b   Le Souëf, Peter N ^a   Bassat, Quique ^c,d  

^a UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^b UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^c Manhiça Health Research Center   (Mozambique)

^d UNIVERSITY OF BARCELONA   (Spain)

^e CURTIN UNIVERSITY   (Australia)

^f UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

children; Mozambique; pneumonia; rhinovirus

Indexed keywords

BIOASSAY; BLOOD; CHILD HEALTH; DISEASE PREVALENCE; HOSPITAL SECTOR; HUMAN IMMUNODEFICIENCY VIRUS; INFECTIOUS DISEASE; MALARIA; PHYLOGENETICS; PNEUMONIA; POLYMERASE CHAIN REACTION; VIRUS;

ARTICLE; BLOOD CELL COUNT; BLOOD CULTURE; BLOOD SAMPLING; CHILD; CHILD HOSPITALIZATION; CLINICAL FEATURE; DEMOGRAPHY; FEMALE; GENOTYPE; HUMAN; INFANT; LABORATORY TEST; MAJOR CLINICAL STUDY; MALE; MOZAMBIQUE; NASOPHARYNGEAL ASPIRATION; NEWBORN; PHYLOGENETIC TREE; PNEUMONIA; PREVALENCE; PUBLIC HOSPITAL; RESPIRATORY VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RHINOVIRUS; SEASONAL VARIATION; SEQUENCE ANALYSIS; THORAX RADIOGRAPHY; VIRUS IDENTIFICATION; VIRUS TYPING;

MOZAMBIQUE;

HUMAN RHINOVIRUS SP.; RHINOVIRUS;

EID: 84985910591     PISSN: 13602276     EISSN: 13653156     Source Type: Journal    
DOI: 10.1111/tmi.12743     Document Type: Article

References (50)

1. Walker CLF, Rudan I, Liu L et al. Global burden of childhood pneumonia and diarrhoea. Lancet 2013: 381: 1405–1416.
2. Mahony JB. Detection of respiratory viruses by molecular methods. Clin Microbiol Rev 2008: 2008: 716–747.
3. Kwofie T, Anane Y, Nkrumah B, Annan A, Nguah S, Owusu M. Respiratory viruses in children hospitalized for acute lower respiratory tract infection in Ghana. Virol J 2012: 9: 78.
4. Feikin DR, Njenga MK, Bigogo G et al. Viral and bacterial causes of severe acute respiratory illness among children aged less than 5 years in a high malaria prevalence area of western Kenya, 2007–2010. Pediatr Infect Dis J 2013: 32: 14–19.
5. Douglas RG. Pathogenesis of rhinovirus common colds in human volunteers. Ann Otolaryngol 1970: 79: 563–571.
6. Lau SKP, Yip CCY, Lin AWC et al. Clinical and molecular epidemiology of human rhinovirus C in children and adults in Hong Kong reveals a possible distinct human rhinovirus C subgroup. J Infect Dis 2009: 200: 1096–1103.
7. Lamson D, Renwick N, Kapoor V et al. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza- like illness in New York State during 2004-2005. J Infect Dis 2006: 194: 1398–1402.
8. Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections. J Med Virol 2006: 78: 1232–1240.
9. Renwick N, Schweiger B, Kapoor V et al. A recently identified rhinovirus genotype is associated with severe respiratory-tract infection in children in Germany. J Infect Dis 2007: 196: 1745–1760.
10. Bizzintino JA, Lee WM, Laing IA et al. Association between human rhinovirus C and severity of acute asthma in children. Eur Respir J 2011: 37: 1037–1042.
11. Miller EK, Edwards KM, Weinberg GA et al. A novel group of rhinoviruses is associated with asthma hospitalizations. J Allergy Clin Immun 2009: 123: 98–104.
12. Miller EK, Khuri-Bulos N, Williams JV et al. Human rhinovirus C associated with wheezing in hospitalised children in the Middle East. J Clin Microbiol 2009: 46: 85–89.
13. Linsuwanon P, Payungporn S, Samransamruajkit R et al. High prevalence of human rhinovirus C infection in Thai children with acute lower respiratory tract disease. J Infection 2009: 59: 115–121.
14. O'Callaghan-Gordo C, Díez-Padrisa N, Abacassamo F et al. Viral acute respiratory infections among infants visited in a rural hospital of southern Mozambique. Trop Med Int Health 2011: 16: 1054–1060.
15. O'Callaghan-Gordo C, Bassat Q, Morais L et al. Etiology and epidemiology of viral pneumonia among hospitalized children in rural Mozambique: a malaria endemic area with high prevalence of human immunodeficiency virus. Pediatr Infect Dis J 2011: 30: 39–44.
16. Smuts H, Workman L, Zar H. Human rhinovirus infection in young African children with acute wheezing. BMC Infect Dis 2011: 11: 65.
17. Onyango CO, Welch SR, Munywoki PK et al. Molecular epidemiology of human rhinovirus infections in Kilifi, coastal Kenya. J Med Virol 2012: 84: 823–831.
18. Esposito S, Daleno C, Baggi E et al. Circulation of different rhinovirus groups among children with lower respiratory tract infection in Kiremba, Burundi. Euro J Clin Microbiol 2012: 31: 3251–3256.
19. Graham SM. HIV and respiratory infections in children. Curr Opin Pulm Med 2003: 9: 215–220.
20. Nunes MC, Kuschner Z, Rabede Z et al. Clinical epidemiology of bocavirus, rhinovirus, two polyomaviruses and four coronaviruses in HIV-infected and HIV-uninfected South African children. PLoS One 2014: 9: e86448.
21. Ruuskanen O, Lahti E, Jennings LC, Murdoch DR. Viral pneumonia. Lancet 2011: 377: 1264–1275.
22. Adams O, Weis J, Jasinska K, Vogel M, Tenenbaum T. Comparison of human metapneumovirus, respiratory syncytial virus and Rhinovirus respiratory tract infections in young children admitted to hospital. J Med Virol 2014: 87: 275–280.
23. Richard N, Komurian-Pradel F, Javouhey E et al. The impact of dual viral infection in infants admitted to pediatric intensive care unit associated with severe bronchiolitis. Pediatr Infect Dis J 2007: 27: 213–217.
24. Semple MG, Cowell A, Dove W et al. Dual infection of infants by human metapneumovirus and human respiratory syncytial virus is strongly associated with severe bronchiolitis. J Infect Dis 2005: 2005: 382–386.
25. Calvo C, García-García ML, Blanco C et al. Multiple simultaneous viral infections in infants with acute respiratory tract infections in Spain. J Clin Virol 2008: 42: 268–272.
26. Rhedin S, Hamrin J, Naucler P et al. Respiratory Viruses in Hospitalized Children with Influenza-Like Illness during the H1n1 2009 Pandemic in Sweden. PLoS One 2012: 7: e51491.
27. Echenique IA, Chan PA, Chapin KC, Andrea SB, Fava JL, Mermel LA. Clinical characteristics and outcomes in hospitalized patients with respiratory viral co-infection during the 2009 H1N1 influenza pandemic. PLoS One 2013: 8: e60845.
28. Marcone DN, Ellis A, Videla C et al. Viral etiology of acute respiratory infections in hospitalized and outpatient children in Buenos, Aires, Argentina. Pediatr Infect Dis J 2013: 32: e105–e110.
29. Goka EA, Vallely PJ, Mutton KJ, Klapper PE. Single, dual and multiple respiratory virus infections and risk of hospitalization and mortality. Epidemiol Infect 2014: 1: 1–11.
30. Schnepf N, Resche-Rigon M, Chaillon A et al. High burden of non-influenza viruses in influenza-like illness in the early weeks of H1N1v epidemic in France. PLoS One 2011: 6: e23514.
31. Bicer S, Giray T, Col D et al. Virological and clinical characterizations of respiratory infections in hospitalized children. Ital J Pediatr 2013: 39: 22.
32. Alonso PL, Saúte F, Aponte JJ et al. Manhiça DSS, Mozambique. Population and Health in Developing Countries. International Development Research Centre: Ottawa; 2002.
33. Lee W, Kiesner C, Pappas T et al. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illness in infants. PLoS One 2007: 2: e966.
34. Kiang D, Kalra I, Yagi S et al. Assay for 5′ noncoding region analysis of all human rhinovirus prototype strains. J Clin Microbiol 2008: 46: 3736–3745.
35. Lee W-M, Lemanske RF, Evans MD et al. Human rhinovirus species and season of infection determine illness severity. Am J Respir Crit Care Med 2012: 186: 886–891.
36. Cherian T, Mulholland EK, Carlin JB et al. Standardized interpretation of paediatric chest radiographs for the diagnosis of pneumonia in epidemiological studies. Bull World Health Organ 2005: 83: 353–359.
37. Cox DW, Bizzintino J, Ferrari G et al. Human rhinovirus species C infection in young children with acute wheeze is associated with increased acute respiratory hospital admissions. Am J Respir Crit Care Med 2013: 188: 1358–1364.
38. Jroundi I, Mahraoui C, Benmessaoud R et al. The epidemiology and aetiology of infections in children admitted with clinical severe pneumonia to a university hospital in Rabat, Morocco. J Trop Pediatr 2014: 60: 270–278.
39. Mermond S, Zurawski V, D'Ortenzio E et al. Lower respiratory infections among hospitalized children in New Caledonia: a pilot study for the Pneumonia Etiology Research for Child Health Project. Clin Infect Dis 2012: 54 (Suppl. 2): S180–S189.
40. Chidlow GR, Laing IA, Harnett GB et al. Respiratory viral pathogens associated with lower respiratory tract disease among young children in the highlands of Papua New Guinea. J Clin Virol 2012: 54: 235–239.
41. Madhi SA, Schoub B, Simmank K, Blackburn N, Klugman KP. Increased burden of respiratory viral associated severe lower respiratory tract infections in children infected with human immunodeficiency virus type-1. J Pediatr 2000: 137: 78–84.
42. Mansbach JM, McAdam AJ, Clark S et al. Prospective Multicenter Study of the Viral Etiology of Bronchiolitis in the Emergency Department. Acad Emerg Med 2008: 15: 111–118.
43. Korppi M, Kotaniemi-Syranen A, Waris M, Vainionpaa R, Reijonen T. Rhinovirus-associated wheezing in infancy: comparison with respiratory syncytial virus bronchiolitis. Pediatr Infect Dis J 2004: 23: 995–999.
44. Luchsinger V, Ampuero S, Palomino MA et al. Comparison of virological profiles of respiratory syncytial virus and rhinovirus in acute lower tract respiratory infections in very young Chilean infants, according to their clinical outcome. J Clin Virol 2014: 61: 138–144.
45. Marguet C, Lubrano M, Gueudin M et al. In very young infants severity of acute bronchiolitis depends on carried viruses. PLoS One 2009: 4: e4596.
46. Guinovart C, Bassat Q, Sigauque B et al. Malaria in rural Mozambique. Part I: children attending the outpatient clinic. Malar J 2008: 7: 36.
47. Loscertales MP, Roca A, Ventura PJ et al. Epidemiology and clinical presentation of respiratory syncytial virus infection in a rural area of southern Mozambique. Pediatr Infect Dis J 2002: 21: 148–155.
48. Robertson SE, Roca A, Alonso PL et al. Respiratory syncytial virus infection: denominator-based studies in Indonesia, Mozambique, Nigeria and South Africa. Bull World Health Organ 2004: 82: 914–922.
49. Ouédraogo S, Traoré B, Nene Bi ZAB et al. Viral Etiology of Respiratory Tract Infections in Children at the Pediatric Hospital in Ouagadougou (Burkina Faso). PLoS One 2014: 9: e110435.
50. Niang MN, Diop OM, Sarr FD et al. Viral etiology of respiratory infections in children under 5 years old living in tropical rural areas of Senegal: the EVIRA project. J Med Virol 2010: 82: 866–872.