Comparison of virological profiles of respiratory syncytial virus and rhinovirus in acute lower tract respiratory infections in very young Chilean infants, according to their clinical outcome

Journal of Clinical Virology

Volumn 61, Issue 1, 2014, Pages 138-144

  Luchsinger, Vivian ^a   Ampuero, Sandra ^a   Palomino, M Angélica ^a   Chnaiderman, Jonás ^a   Levican, Jorge ^a   Gaggero, Aldo ^a   Larrañaga, Carmen E ^a  

^a UNIVERSITY OF CHILE   (Chile)

Author keywords

ALTRI; Respiratory syncytial virus; Rhinovirus; Severe infantile respiratory infection

Indexed keywords

ACUTE LOWER RESPIRATORY TRACT INFECTION; ARTICLE; CHILE; CONTROLLED STUDY; DISEASE ASSOCIATION; DISEASE SEVERITY; GENOTYPE; HOSPITALIZATION; HOSPITALIZED INFANT; HUMAN; IMMUNOFLUORESCENCE; INFANT; INFANT DISEASE; LOWER RESPIRATORY TRACT INFECTION; MAJOR CLINICAL STUDY; NASOPHARYNX; NUCLEOTIDE SEQUENCE; OUTCOME ASSESSMENT; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; RESPIRATORY SYNCYTIAL PNEUMOVIRUS; RESPIRATORY SYNCYTIAL VIRUS INFECTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RHINOVIRUS; RHINOVIRUS INFECTION; VIRUS LOAD; CLASSIFICATION; FEMALE; GENETICS; HUMAN RESPIRATORY SYNCYTIAL VIRUS; IMMUNOASSAY; ISOLATION AND PURIFICATION; MALE; PATHOLOGY; PICORNAVIRIDAE INFECTIONS; RESPIRATORY SYNCYTIAL VIRUS INFECTIONS; RESPIRATORY TRACT INFECTIONS; TREATMENT OUTCOME; VIROLOGY;

CHILE; FEMALE; GENOTYPE; HUMANS; IMMUNOASSAY; INFANT; MALE; NASOPHARYNX; PICORNAVIRIDAE INFECTIONS; REAL-TIME POLYMERASE CHAIN REACTION; RESPIRATORY SYNCYTIAL VIRUS INFECTIONS; RESPIRATORY SYNCYTIAL VIRUS, HUMAN; RESPIRATORY TRACT INFECTIONS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RHINOVIRUS; TREATMENT OUTCOME; VIRAL LOAD;

EID: 84905098289     PISSN: 13866532     EISSN: 18735967     Source Type: Journal    
DOI: 10.1016/j.jcv.2014.06.004     Document Type: Article

References (43)

1. Collins P.L., Graham B.S. Viral and host factors in human respiratory syncytial virus pathogenesis. J Virol 2008, 82:2040-2055.
2. Hall C., Weinberg G., Iwane M.K., Blumkin A.K., Edwards K.M., Staat M., et al. The burden of respiratory syncytial virus infection in young children. N Engl J Med 2009, 360:588-598.
3. Zorc J.J., Hall C.B. Bronchiolitis: recent evidence on diagnosis and management. Pediatrics 2010, 125:342-349.
4. Avendaño L.F., Palomino M.A., Larrañaga C. Surveillance for respiratory syncytial virus in infants hospitalized for acute lower respiratory infection in Chile (1989-2000). J Clin Microbiol 2003, 41:4879-4882.
5. Palomino M.A., Larrañaga C., Villagra E., Camacho J., Avendaño L.F. Adenovirus and respiratory syncytial virus-adenovirus mixed acute lower respiratory infections in Chilean infants. Pediatr Infect Dis J 2004, 23:337-341.
6. Mansbach J.M., Clark S., Christopher N.C., LoVecchio F., Kunz S., Acholonu U., et al. Prospective multicenter study of the viral etiology of bronchiolitis in the emergency department. Pediatrics 2008, 121:680-688.
7. Manoha C., Espinosa S., Aho S.L., Huet F., Pothier P. Epidemiological and clinical features of hMPV, RSV and RVs infections in young children. J Clin Virol 2007, 38(3):221-226.
8. Korppi M., Kotaniemi-Syrjanen A., Waris M., Vainionpaa R., Reijonen T.M. Rhinovirus-associated wheezing in infancy: comparison with respiratory syncytial virus bronchiolitis. Pediatr Infect Dis J 2004, 23:995-999.
9. Marguet C., Lubrano M., Gueudin M., Le Roux P., Deschildre A., Forget C., et al. In very young infants severity of acute bronchiolitis depends on carried viruses. PLoS ONE 2009, 4(2):e4596.
10. Friedlander S.L., Busse W.W. The role of rhinovirus in asthma exacerbations. J Allergy Clin Immunol 2005, 116:267-273.
11. Singh A.M., Moore P.E., Gern J.E., Lemanske R.F., Hartert T.V. Bronchiolitis to asthma. A review and call for studies of gene-virus interactions in asthma causation. Am J Respir Crit Care Med 2007, 175:108-119.
12. Jartti T., Lehtinen P., Vanto T., Hartiala J., Vuorinen T., Makela M., et al. Evaluation of the efficacy of prednisolone in early wheezing induced by rhinovirus or respiratory syncytial virus. Pediatr Infect Dis J 2006, 25:482-488.
13. Mosser A.G., Brockman-Schneider R., Amineva S., Burchell L., Sedgwick J.B., Busse W.W., et al. Similar frequency of rhinovirus-infectible cells in upper and lower airway epithelium. J Infect Dis 2002, 185:734-743.
14. Larrañaga C., Ampuero S., Luchsinger V., Carrión F., Aguilar N., Morales P., et al. Impaired immune response in severe human lower tract respiratory infection. Pediatr Infect Dis J 2009, 28(10):867-873.
15. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 1987, 162:156-159.
16. Cane P., Pringle C. Molecular epidemiology of respiratory syncytial virus: rapid identification of subgroups A lineages. J Virol Methods 1992, 40:297-306.
17. Kiang D., Kalra I., Yagi S., Louie J.K., Boushey H., Boothby J., et al. Assay for 5' noncoding region analysis of all human rhinovirus prototype strains. J Clin Microbiol 2008, 46:3736-3745.
18. Peret T., Hall C., Hammond G., Piedra P., Storch G.A., Sullender W.M., et al. Circulation patterns of group A and B human respiratory syncytial virus genotypes in 5 communities in North America. J Infect Dis 2000, 181:1891-1896.
19. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011, 28:2731-2739.
20. Venter M., Madhi S., Tiemessen C., Schoub B. Genetic diversity and molecular epidemiology of respiratory syncytial virus over four consecutive seasons in South Africa: identification of new subgroup A and B genotypes. J Gen Virol 2001, 82:2117-2124.
21. Lee W.M., Kiesner C., Pappas T., Lee I., Grindle K., Jartti T., et al. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS ONE 2007, 2(10):e966. 10.1371/journal.pone.0000966.
22. Krilov L., Pierik L., Keller E., Mahan K., Watson D., Hirsch M., et al. The association of rhinoviruses with lower respiratory tract disease in hospitalized patients. J Med Virol 1986, 19:345-352.
23. Papadopoulos N.G., Moustaki M., Tsolia M., Bossios A., Astra E., Prezerakou A., et al. Association of rhinovirus infection with increased disease severity in acute bronchiolitis. Am J Respir Crit Care Med 2002, 165:1285-1289.
24. Iwane M.K., Prill M.M., Lu X., Miller E.K., Edwards K.M., Hall C.B., et al. Human rhinovirus species associated with hospitalizations for acute respiratory illness in young US children. J Infect Dis 2011, 204:1702-1710.
25. Welliver T.P., Garofalo R.P., Hosakote Y., Hintz K.H., Avendaño L., Sanchez K., et al. Severe human lower respiratory tract illness caused by respiratory syncytial virus and influenza virus us characterized by the absence of pulmonary cytotoxic lymphocytes responses. J Infect Dis 2007, 195:1126-1136.
26. Ampuero S., Luchsinger V., Tapia L., Palomino M.A., Larrañaga C. SP-A1, SP-A2 and SP-D gene polymorphisms in severe acute respiratory syncyitial infection in chilean infants. Infect Genet Evol 2011, 11(6):1368-1377.
27. Paulus S.C., Hirschfeld A.F., Victor R.E., Brunstein J., Thomas E., Turvey S.E. Common human toll-like receptor 4 polymorphisms - role in susceptibility to respiratory syncytial virus infection and functional immunological relevance. Clin Immunol 2007, 123:252-257.
28. Lathi M., Löfgren J., Martilla R., Renko M., Klaavuniemi T., Haataja R., et al. Surfactant protein D gene polymorphism associated with severe respiratory syncytial virus infection. Pediatr Res 2002, 51:696-699.
29. Hull J. Genetic susceptibility to RSV disease. Respiratory syncytial virus 2007, vol. 14:115-140. Elsevier, Amsterdam.
30. De Vincenzo J.P. Natural infection of infants with respiratory syncytial virus subgroups A and B: a study of frequency, disease severity, and viral load. Pediatr Res 2004, 56:914-917.
31. Cane P. Molecular epidemiology of respiratory syncytial virus. Rev Med Virol 2001, 11:103-116.
32. Sato M., Satto R., Sakai T., Sano Y., Nishikawa M., Sasaki A., et al. Molecular epidemiology of respiratory syncytial virus infections among children with acute respiratory symptoms in a community over three seasons. J Clin Microbiol 2005, 43(1):36-40.
33. Fodha I., Vabret A., Ghedira L., Seboui H., Slaheddine Chouchane S., et al. Respiratory syncytial virus infections in hospitalized infants: association between viral load, virus subgroup, and disease severity. J Med Virol 2007, 79:1951-1958.
34. Galiano M.C., Luchsinger V., Videla C.M., De Souza L., Puch S.S., Palomo C., et al. Intragroup antigenic diversity of human respiratory syncytial virus (group A) isolated in Argentina and Chile. J Med Virol 2005, 77:311-316.
35. Shobugawa Y., Saito R., Sano Y., Zaraket H., suzuki Y., Kumaki A., et al. Emerging genotypes of human respiratory syncytial virus subgroup A among patients in Japan. J Clin Microbiol 2009, 47(8):2475-2482.
36. Sovero M., Garcia J., Kochel T., Laguna-Torres V.A., Gomez J., Chicaiza W., et al. Circulating strains of human respiratory syncycytial virus in Central and South America. PLoS ONE 2011, 6(8):e22111.
37. Eshaghi A., Duvvuri V., Lai R., Nadarajah J., Li A., Patel S., et al. Genetic variability of human respiratory syncytial virus A strains circulating in Ontario. A novel genotype with a 72 nucleotide G gene duplication. PLoS ONE 2012, 7(3):e32807.
38. Wright P.F., Gruber C.W., Peters M., Reed G., Zhu Y., Robinson F., et al. Illness severity, viral shedding, and antibody responses in infants hospitalized with bronchiolitis caused by respiratory syncytial virus. J Infect Dis 2002, 185:1011-1018.
39. El Saleeby C., Bush A., Harrison L., Aitken J., DeVincenzo J. Respiratory syncytial virus load, viral dynamics, and disease severity in previously healthy naturally infected children. J Infect Dis 2011, 204:996-1002.
40. Laine P., Savolainen C., Blomqvist S., Hovi T. Phylogenetic analysis of human rhinovirus capsid protein VP1 and 2A protease coding sequences confirms shared genus-like relationships with human enteroviruses. J Gen Virol 2005, 86:697-706.
41. Lysholm F., Wetterbom A., Lindau C., Darban H., Bjerkner A., et al. Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing. PLoS ONE 2012, 7(2):e30875. 10.1371/journal.pone.0030875.
42. Simmonds P., McIntyre C., Savolainen-Kopra C., Tapparel C., Mackay I., Hovi T. Proposals for the classification of human rhinovirus species C into genotypically assigned types. J Gen Virol 2010, 91:2409-2419.
43. Fuji N., Suzuki A., Lupisan S., Sombrero L., Galang H., et al. Detection of human rhinovirus C viral genome in blood among children with severe respiratory infections in the Philippines. PLoS ONE 2011, 6(11):e27247. 10.1371/journal.pone.0027247.