Sequential mixed cultures: From syngas to malic acid

Frontiers in Microbiology

Volumn 7, Issue JUN, 2016, Pages

  Oswald, Florian ^a   Dörsam, Stefan ^a   Veith, Nicolas ^a   Zwick, Michaela ^a   Neumann, Anke ^a   Ochsenreither, Katrin ^a   Syldatk, Christoph ^a  

^a KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

Author keywords

Acetate; Aspergillus oryzae; Clostridium ljungdahlii; Fermentation; Malic acid; Process coupling; Syngas

Indexed keywords

ACETIC ACID; AMMONIUM CHLORIDE; MALIC ACID; NATURAL GAS; SYNGAS; UNCLASSIFIED DRUG;

ANAEROBIC BACTERIUM; ANALYTIC METHOD; ARTICLE; ASPERGILLUS ORYZAE; CARBON SOURCE; CLOSTRIDIUM; CLOSTRIDIUM LJUNGDAHLII; FERMENTATION; FERMENTATION OPTIMIZATION; FUNGUS FERMENTATION; GAS CHROMATOGRAPHY; ION CHROMATOGRAPHY; MIXED CELL CULTURE; NITROGEN CONCENTRATION; NONHUMAN; SYNGAS FERMENTATION;

EID: 84980042514     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2016.00891     Document Type: Article

References (45)

1. Barratt, R. W., Johnson, G. B., and Ogata, W. N. (1965). Wild-Type and mutant stocks of aspergillus nidulans. Genetics 52, 233-246.
2. Battat, E., Peleg, Y., Bercovitz, A., Rokem, J. S., and Goldberg, I. (1991). Optimization of L-Malic acid production by Aspergillus flavus in a stirred fermentor. Biotechnol. Bioeng. 37, 1108-1116. doi: 10.1002/bit.260371117
3. Bengelsdorf, F, Straub, M., and Dürre, P. (2013). Bacterial synthesis gas (syngas) fermentation. Environ. Technol. 34, 1639-1651. doi: 10.1080/09593330.2013.827747
4. Bercovitz, A., Peleg, Y., Battat, E., Rokem, J. S, and Goldberg, I. (1990). Localization of pyruvate carboxylase in organic acid-producing aspergillus strains. Appl. Environ. Microbiol. 56, 1594-1597.
5. Bredwell, M., and Worden, R. (1998). Mass-transfer properties of microbubbles. 1. experimental studies. Biotechnol. Prog. 14, 31-38.
6. Brown, S. H., Bashkirova, L., Berka, R., Chandler, T., Doty, T., McCall, K., McCulloch, M., et al. (2013). Metabolic engineering of Aspergillus oryzae NRRL 3488 for increased production of L-Malic acid. Appl. Microbiol. Biotechnol. 97, 8903-8912. doi: 10.1007/s00253-013-5132-2
7. Carman, A. J., Vylkova, S., and Lorenz, M. C. (2008). Role of acetyl coenzyme a synthesis and breakdown in alternative carbon source utilization in candida albicans. Eukaryotic Cell 7, 1733-1741. doi: 10.1128/EC.00253-08
8. Chen, J.-S., and Blanchard, D. K. (1978). Isolation and Properties of a unidirectional H2-oxidizing hydrogenase from strictly anaerobic N2-fixing bacterium Clostridium pasteurianum W5. Biochem. Biophys. Res. Commun. 84, 1144-1150. doi: 10.1016/0006-291X(78)91703-5
9. Cotter, J. L., Chinn, M. S., and Grunden, A. M. (2009). Influence of process parameters on growth of Clostridium ljungdahlii and Clostridium autoethanogenum on synthesis gas. Enzyme Microb. Technol. 44, 281-288. doi: 10.1016/j.enzmictec.2008.11.002
10. Daniell, J., Köpke, M., and Simpson, S. D. (2012). Commercial biomass syngas fermentation. Energies 5, 5372-5417. doi: 10.3390/en5125372
11. Datta, R., and Reeves, A. (2014). Syntropic Co-Culture of Anaerobic Microorganism for Production of n-Butanol from Syngas. US patent no. US 2014/0206066 A1.
12. Demler, M., and Weuster-Botz, D. (2011). Reaction engineering analysis of hydrogenotrophic production of acetic acid by Acetobacterium woodii. Biotechnol. Bioeng. 108, 470-474. doi: 10.1002/bit.22935
13. Devarapalli, M., Atiyeh, H. K., Phillips, J. R., Lewis, R. S., and Huhnke, R. L. (2016). Ethanol production during semi-continuous syngas fermentation in a trickle bed reactor using Clostridium ragsdalei. Bioresour. Technol. 209, 56-65 doi: 10.1016/j.biortech.2016.02.086
14. Diekert, G., and Wohlfarth, G. (1994). Matabolism of homoacetogens. Antonie van Leeuwenhoek 66, 209-221.
15. Dillschneider, R., Schulze, I., Neumann, A., Posten, C., and Syldatk, C. (2014). Combination of algae and yeast fermentation for an integrated process to produce single cell oils. Appl. Microbiol. Biotechnol. 98, 7793-7802. doi: 10.1007/s00253-014-5867-4
16. Gray, C. T., and Gest, H. (1965). Biological formation of molecular hydrogen. Science 148, 186-192.
17. Hammerschmidt, A., Boukis, N., Hauer, E., Galla, U., Dinjus, E., Hitzmann, B., Larsen, T., and Nygaard, S. D. (2011). Catalytic conversion of waste biomass by hydrothermal treatment. Fuel 90, 555-562. doi: 10.1016/j.fuel.2010.10.007
18. Hu, P., Chakraborty, S., Kumar, A., Woolston, B. M., Liu, H., Emerson, D., et al. (2016). Integrated bioprocess for conversion of gaseous substrates to liquids. Proc. Natl. Acad. Sci. U.S.A. 113, 3773-3778. doi: 10.1073/pnas.1516867113
19. Kim, B. H., Bellows, P., Datta, R., and Zeikus, J. G. (1984). Control of carbon and electron flow in Clostridium acetobutylicum fermentations: utilization of carbon monoxide to inhibit hydrogen production and enhance butanol yields. Appl. Environ. Microbiol. 48, 764-770.
20. Kim, D., and Day, D. F. (1994). A new process for the production of clinical dextran by mixed-culture fermentation of lipomyces starkeyi and Leuconostoc mesenteroides. Enzyme Microb. Technol. 16, 844-848. doi: 10.1016/0141-0229(94)90058-2
21. Klasson, K. T., Ackerson, M. D., Clausen, E. C., and Gaddy, J. L. (1993). Biological conversion of coal and coal-derived synthesis gas. Fuel 72, 1673-1678. doi: 10.1016/0016-2361(93)90354-5
22. Knuf, C., Nookaew, I., Brown, S. H., McCulloch, M., Berry, A., and Nielsen, J. (2013). Investigation of malic acid production in Aspergillus oryzae under nitrogen starvation conditions. Appl. Environ. Microbiol. 79, 6050-6058. doi: 10.1128/AEM.01445-13
23. Köpke, M., Mihalcea, C., Liew, F. M., Tizard, J. H., Ali, M. S., Conolly, J. J., Al-Sinawi, B., and Simpson, S. D. (2011). 2, 3-butanediol production by acetogenic bacteria, an alternative route to chemical synthesis, using industrial waste gas. Appl. Environ. Microbiol. 77, 5467-5475. doi: 10.1128/AEM.00355-11
24. Lee, J. W., Kim, H. U., Choi, S., Yi, J., and Lee, S. Y. (2011). Microbial production of building block chemicals and polymers. Curr. Opin. Biotechnol. 22, 758-767. doi: 10.1016/j.copbio.2011.02.011
25. Lewis, R. S., Tanner, R. S., and Huhnke, R. L. (2007). Indirect or Direct Fermentation of Biomass to Fuel Alcohol. US patent no. US 2007/0275447 A1.
26. Lohbeck, K., Haferkorn, H., Fuhrmann, W., and Fedtke, N. (2000). "Maleic and fumaric acids, "in Ullmann's Encyclopedia of Industrial Chemistry, ed B. Elvers (Weinheim: Wiley-VCH Verlag GmbH & Co. KGaA), 145-155.
27. Maddipati, P., Atiyeh, H. K., Bellmer, D. D., and Huhnke, R. L. (2011). Ethanol production from syngas by Clostridium strain P11 using corn steep liquor as a nutrient replacement to yeas extract. Bioresour. Technol. 102, 6494-6501.
28. Miltenberger, K. (2000). "Hydroxycarboxylic acids, aliphatic, "in Ullmann's Encyclopedia of Industrial Chemistry, ed B. Elvers (Weinheim: Wiley-VCH Verlag GmbH & Co. KGaA), 481-492.
29. Moon, S. Y., Hong, S. H., Kim, T. Y., and Lee, S. Y. (2008). Metabolic engineering of escherichia coli for the production of malic acid. Biochem. Eng. J. 40, 312-320. doi: 10.1016/j.bej.2008.01.001
30. Schuchmann, K., and Müller, V. (2014). Autotrophy at the thermodynamic limit of life: a model for energy conservation in acetogenic bacteria. Nat. Rev. Microbiol. 12, 809-821. doi: 10.1038/nrmicro3365
31. Neumann, A., Dörsam, S., Oswald, F., and Ochsenreither, K. (2015). "Microbial production of value added chemicals from pyrolysis oil and syngas, "in Sustainable Production of Bulk Chemicals, ed M. Xian (Dordrecht: Springer Science+Buisness), 69-105.
32. Ochsenreither, K., Fischer, C., Neumann, A., and Syldatk, C. (2014). Process characterization and influence of alternative carbon sources and carbon-to-nitrogen ratio on organic acid production by Aspergillus oryzae DSM1863. Appl. Microbiol. Biotechnol. 98, 5449-5460. doi: 10.1007/s00253-014-5614-x
33. Osmani, S. A., and Scrutton, M. C. (1983). The sub-cellular localisation of pyruvate carboxylase and of some other enzymes in Aspergillus nidulans. Eur. J. Biochem. 133, 551-560. doi: 10.1111/j.1432-1033.1983.tb07499.x
34. Peleg, Y., Barak, A., Scrutton, M. C., and Goldberg, I. (1989). Malic acid accumulation by Aspergillus flavus. III. 13C NMR and isoenzyme analysis. Appl. Microbiol. Biotechnol. 30, 176-83. doi: 10.1007/BF00264008
35. Peleg, Y., Stieglitz, B., and Goldberg, I. (1988). Malic acid accumulation by Aspergillus flavus-I. biochemical aspects of acid biosynthesis. Appl. Microbiol. Biotechnol. 28, 69-75. doi: 10.1007/BF00250501
36. Rokni, M. (2015). Thermodynamic analyses of municipal solid waste gasification plant integrated with solid oxide fuel cell and stirling hybrid system. Int. J. Hydrogen Energy. 40, 7855-7869. doi: 10.1016/j.ijhydene.2014.11.046
37. Schiel-Bengelsdorf, B., Montoya, J., Linder, S., and Dürre, P. (2013). Butanol fermentation. Environ. Technol. 34, 1691-1710. doi: 10.1080/09593330.2013.827746
38. Song, M. H., Nah, J.-Y., Han, Y. S., Han, D. M., and Chae, K.-S. (2001). Promotion of conidial head formation in Aspergillus oryzae by a salt. Biotechnol. Lett. 23, 689-691. doi: 10.1023/A:1010308601469
39. Strijbis, K., and Distel, B. (2010). Intracellular Acetyl Unit Transport in Fungal Carbon Metabolism. Eukaryotic Cell 9, 1809-1815. doi: 10.1128/EC.00172-10
40. Tanner, R. (2007). "Cultivation of bacteria and fungi, "in Manual of Enviromental Microbiology, 3rd Edn, eds C. J. Hurst, R. L. Crawford, J. L. Garland, D. A. Lipson, A. L. Mills, and L. D. Stetzenbach (Washington, DC: ASM Press), 69-78.
41. Werpy, T., and Petersen, G. (2004). Top Value Added Chemicals from Biomass Volume I-Results of Screening for Potential Candidates from Sugars and Synthesis Gas Top Value Added Chemicals from Biomass Volume I?: Results of Screening for Potential Candidates. Washington: U.S. Department of Energy.
42. Xu, D., Tree, D. R., and Lewis, R. S. (2011). The effects of syngas impurities on syngas fermentation to liquid fuels. Biomass Bioener. 35, 2690-2696. doi: 10.1016/j.biombioe.2011.03.005
43. Zelle, R. M., de Hulster, E., van Winden, W. A., de Waard, P., Dijkema, C., Winkler, A. A., et al. (2008). Malic acid production by saccharomyces cerevisiae: engineering of pyruvate carboxylation, oxaloacetate reduction, and malate export. Appl. Environ. Microbiol. 74, 2766-2777. doi: 10.1128/AEM.02591-07
44. Zhang, C., Yang, H., Yang, F., and Ma, Y. (2009). Current progress on butyric acid production by fermentation. Curr. Microbiol. 59, 656-663 doi: 10.1007/s00284-009-9491-y
45. Zhang, X., Wang, X., Shanmugam, K. T., and Ingram, L. O. (2011). L-Malate production by metabolically engineered escherichia coli. Appl. Environ. Microbiol. 77, 427-434. doi: 10.1128/AEM.01971-10