Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data

PLoS Computational Biology

Volumn 12, Issue 7, 2016, Pages

  Lu, Yuheng ^a   Leslie, Christina S ^a  

^a MEMORIAL SLOAN KETTERING CANCER CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING SITES; OPEN SOURCE SOFTWARE; OPEN SYSTEMS; RNA;

BINDING MODELS; DISCRIMINATIVE LEARNING; ISOFORMS; LEARN+; PREDICTION ALGORITHMS; PREDICTION MODELLING; SVM CLASSIFIERS; TARGET PREDICTION; TARGET SITES; TRANSCRIPTOMES;

FORECASTING;

ARGONAUTE PROTEIN; MICRORNA;

3' UNTRANSLATED REGION; ANIMAL TISSUE; ARTICLE; BINDING SITE; CAENORHABDITIS ELEGANS; CLIP SEQUENCING; CONTROLLED STUDY; DOWN REGULATION; GENE EXPRESSION; GENE INTERACTION; MOUSE; NONHUMAN; PREDICTION; PROTEIN RNA BINDING; RNA CLEAVAGE; RNA SEQUENCE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; STOP CODON; SUPPORT VECTOR MACHINE; ANIMAL; BIOLOGY; CHEMISTRY; GENETICS; HEK293 CELL LINE; HUMAN; IMMUNOPRECIPITATION; METABOLISM; PROCEDURES; STATISTICAL MODEL; ULTRAVIOLET RADIATION;

ANIMALS; ARGONAUTE PROTEINS; COMPUTATIONAL BIOLOGY; HEK293 CELLS; HUMANS; IMMUNOPRECIPITATION; MICE; MICRORNAS; MODELS, STATISTICAL; SEQUENCE ANALYSIS, RNA; ULTRAVIOLET RAYS;

EID: 84980011656     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1005026     Document Type: Article

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