-
1
-
-
84862286169
-
A framework for human microbiome research
-
Human Microbiome Project Consortium. A framework for human microbiome research. Nature 486, 215-221, doi: 10.1038/nature11209 (2012).
-
(2012)
Nature
, vol.486
, pp. 215-221
-
-
Human Microbiome Project Consortium1
-
2
-
-
35348968286
-
The human microbiome project: Exploring the microbial part of ourselves in a changing world
-
Turnbaugh, P. J. et al. The human microbiome project: exploring the microbial part of ourselves in a changing world. Nature 449, 804-810, doi: 10.1038/nature06244 (2007).
-
(2007)
Nature
, vol.449
, pp. 804-810
-
-
Turnbaugh, P.J.1
-
3
-
-
84961288867
-
Are we really vastly outnumbered? Revisiting the ratio of bacterial to host cells in humans
-
Sender, R., Fuchs, S. & Milo, R. Are we really vastly outnumbered? Revisiting the ratio of bacterial to host cells in humans. Cell 164, 337-340, doi: 10.1016/j.cell.2016.01.013 (2016).
-
(2016)
Cell
, vol.164
, pp. 337-340
-
-
Sender, R.1
Fuchs, S.2
Milo, R.3
-
4
-
-
84962092833
-
The thanatomicrobiome: A missing piece of the microbial puzzle of death
-
Javan, G. T., Finley, S. J., Abidin, Z. & Mulle, J. G. The thanatomicrobiome: A missing piece of the microbial puzzle of death. Front Microbiol, doi: 10.3389/fmicb.2016.00225 (2016).
-
(2016)
Front Microbiol
-
-
Javan, G.T.1
Finley, S.J.2
Abidin, Z.3
Mulle, J.G.4
-
5
-
-
84906055621
-
Distinctive thanatomicrobiome signatures found in the blood and internal organs of humans
-
Can, I., Javan, G. T., Pozhitkov, A. E. & Noble, P. A. Distinctive thanatomicrobiome signatures found in the blood and internal organs of humans. J Microbiol Methods 106, 1-7, doi: 10.1016/j.mimet.2014.07.026 (2014).
-
(2014)
J Microbiol Methods
, vol.106
, pp. 1-7
-
-
Can, I.1
Javan, G.T.2
Pozhitkov, A.E.3
Noble, P.A.4
-
6
-
-
0016746166
-
Biochemical aspects of cell death
-
Gevers, W. Biochemical aspects of cell death. Forensic Sci. 6, 25-29 (1975).
-
(1975)
Forensic Sci.
, vol.6
, pp. 25-29
-
-
Gevers, W.1
-
7
-
-
0037330831
-
Necrosis: A specific form of programmed cell death?
-
Proskuryakov, S. Y., Konoplyannikov, A. G. & Gabai, V. L. Necrosis: a specific form of programmed cell death? Exp Cell Res. 283, 1-16 (2003).
-
(2003)
Exp Cell Res.
, vol.283
, pp. 1-16
-
-
Proskuryakov, S.Y.1
Konoplyannikov, A.G.2
Gabai, V.L.3
-
8
-
-
80052633510
-
Post-mortem volatiles of vertebrate tissue
-
Paczkowski, S. & Schütz, S. Post-mortem volatiles of vertebrate tissue. Appl Microbiol Biotechnol. 91, 917-935, doi: 10.1007/s00253-011-3417-x (2011).
-
(2011)
Appl Microbiol Biotechnol.
, vol.91
, pp. 917-935
-
-
Paczkowski, S.1
Schütz, S.2
-
9
-
-
0036110413
-
Decomposition chemistry of human remains: A new methodology for determining the postmortem interval
-
Vass, A. A. et al. Decomposition chemistry of human remains: a new methodology for determining the postmortem interval. J. Forensic Sci. 47, 542-553 (2002).
-
(2002)
J. Forensic Sci.
, vol.47
, pp. 542-553
-
-
Vass, A.A.1
-
10
-
-
0041852244
-
Beyond the grave-understanding human decomposition
-
Vass, A. A. Beyond the grave-understanding human decomposition. Microbiology Today 28, 190-192 (2001).
-
(2001)
Microbiology Today
, vol.28
, pp. 190-192
-
-
Vass, A.A.1
-
11
-
-
78650883418
-
A roadmap for bridging basic and applied research in forensic entomology
-
Tomberlin, J. K., Mohr, R., Benbow, M. E., Tarone, A. M. & VanLaerhoven, S. A roadmap for bridging basic and applied research in forensic entomology. Annu Rev Entomol. 56, 401-421, doi: 10.1146/annurev-ento-051710-103143 (2011).
-
(2011)
Annu Rev Entomol.
, vol.56
, pp. 401-421
-
-
Tomberlin, J.K.1
Mohr, R.2
Benbow, M.E.3
Tarone, A.M.4
VanLaerhoven, S.5
-
12
-
-
84893387620
-
Microbial community functional change during vertebrate carrion decomposition
-
Pechal, J. L. et al. Microbial community functional change during vertebrate carrion decomposition. PLoS One 8, e79035, doi: 10.1371/journal.pone.0079035 (2013).
-
(2013)
PLoS One
, vol.8
-
-
Pechal, J.L.1
-
13
-
-
84880145697
-
Evaluation of postmortem bacterial migration using culturing and real-time quantitative PCR
-
Tuomisto, S., Karhunen, P. J., Vuento, R., Aittoniemi, J. & Pessi, T. Evaluation of postmortem bacterial migration using culturing and real-time quantitative PCR. J Forensic Sci. 58, 910-916, doi: 10.1111/1556-4029.12124 (2013).
-
(2013)
J Forensic Sci.
, vol.58
, pp. 910-916
-
-
Tuomisto, S.1
Karhunen, P.J.2
Vuento, R.3
Aittoniemi, J.4
Pessi, T.5
-
14
-
-
0347961391
-
On the bacteriology of normal organs
-
Ford, W. W. On the bacteriology of normal organs. J Hyg (Lond) 1, 277-284 (1901).
-
(1901)
J Hyg (Lond)
, vol.1
, pp. 277-284
-
-
Ford, W.W.1
-
15
-
-
0035478854
-
Random forests
-
Brieman, L. Random forests. Mach Learn. 45, 5-32 (2001).
-
(2001)
Mach Learn.
, vol.45
, pp. 5-32
-
-
Brieman, L.1
-
16
-
-
84885895443
-
A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system
-
Metcalf, J. L. et al. A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system. eLife 2, e01104, doi: 10.7554/eLife.01104 (2013).
-
(2013)
ELife
, vol.2
-
-
Metcalf, J.L.1
-
17
-
-
84891826092
-
The potential use of bacterial community succession in forensics as described by high throughput metagenomic sequencing
-
Pechal, J. L. et al. The potential use of bacterial community succession in forensics as described by high throughput metagenomic sequencing. Int J Legal Med. 128, 193-205, doi: 10.1007/s00414-013-0872-1 (2014).
-
(2014)
Int J Legal Med.
, vol.128
, pp. 193-205
-
-
Pechal, J.L.1
-
18
-
-
84955125742
-
Microbial community assembly and metabolic function during mammalian corpse decomposition
-
Metcalf, J. L. et al. Microbial community assembly and metabolic function during mammalian corpse decomposition. Science 351, 158-162, doi: 10.1126/science.aad2646 (2016).
-
(2016)
Science
, vol.351
, pp. 158-162
-
-
Metcalf, J.L.1
-
19
-
-
84866332775
-
Growing unculturable bacteria
-
Stewart, E. J. Growing unculturable bacteria. J. Bacteriol. 194, 4151-4160, doi: 10.1128/JB.00345-12. (2012).
-
(2012)
J. Bacteriol.
, vol.194
, pp. 4151-4160
-
-
Stewart, E.J.1
-
20
-
-
47549111117
-
Temperature affects microbial decomposition of cadavers (Rattus rattus) in contrasting soils
-
Carter, D. O., Yellowlees, D. & Tibbett, M. Temperature affects microbial decomposition of cadavers (Rattus rattus) in contrasting soils. Appl Soil Ecol. 40, 129-137, doi: 10.1016/j.apsoil.2008.03.010 (2008).
-
(2008)
Appl Soil Ecol.
, vol.40
, pp. 129-137
-
-
Carter, D.O.1
Yellowlees, D.2
Tibbett, M.3
-
21
-
-
84896963128
-
The living dead: Bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition
-
Hyde, E. R., Haarmann, D. P., Lynne, A. M., Bucheli, S. R. & Petronsino, J. F. The living dead: bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition. PLoS One 8, e77733, doi: 10.1371/journal.pone.0077733 (2013).
-
(2013)
PLoS One
, vol.8
-
-
Hyde, E.R.1
Haarmann, D.P.2
Lynne, A.M.3
Bucheli, S.R.4
Petronsino, J.F.5
-
22
-
-
84939945220
-
Initial insights into bacterial succession during human decomposition
-
Hyde, E. R., Haarmann, D. P., Petrosino, J. F., Lynne, A. M. & Bucheli, S. R. Initial insights into bacterial succession during human decomposition. Int J Legal Med. 129, 661-671, doi: 10.1007/s00414-014-1128-4 (2015).
-
(2015)
Int J Legal Med.
, vol.129
, pp. 661-671
-
-
Hyde, E.R.1
Haarmann, D.P.2
Petrosino, J.F.3
Lynne, A.M.4
Bucheli, S.R.5
-
23
-
-
79960188841
-
An improved colony PCR procedure for genetic screening of Chlorella and related microalgae
-
Wan, M., Rosenberg, J. N., Faruq, J., Betenbaugh, M. J. & Xia, J. An improved colony PCR procedure for genetic screening of Chlorella and related microalgae. Biotechnol. Lett. 33, 1615-1619, doi: 10.1007/s10529-011-0596-6 (2011).
-
(2011)
Biotechnol. Lett.
, vol.33
, pp. 1615-1619
-
-
Wan, M.1
Rosenberg, J.N.2
Faruq, J.3
Betenbaugh, M.J.4
Xia, J.5
-
24
-
-
79952082506
-
Host-associated and free-living phage communities differ profoundly in phylogenetic composition
-
Caporaso, J. G., Knight, R. & Kelley, S. T. Host-associated and free-living phage communities differ profoundly in phylogenetic composition. PLoS One 6, e16900, doi: 10.1371/journal.pone.0016900 (2011).
-
(2011)
PLoS One
, vol.6
-
-
Caporaso, J.G.1
Knight, R.2
Kelley, S.T.3
-
25
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso, J. G. et al. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci USA. 108, Suppl 1, 4516-4522, doi: 10.1073/pnas.1000080107 (2011).
-
(2011)
Proc Natl Acad Sci USA.
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
-
26
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders, S. & Huber, W. Differential expression analysis for sequence count data. Genome Biol. 11, R106, doi: 10.1186/gb-2010-11-10-r106 (2010).
-
(2010)
Genome Biol.
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
27
-
-
78649724657
-
Vegan: Community ecology package
-
Oksanen, J. et al. Vegan: Community Ecology Package. R package version 1, 17-18 (2011).
-
(2011)
R Package Version
, vol.1
, pp. 17-18
-
-
Oksanen, J.1
-
29
-
-
84876427223
-
Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
-
McMurdie, P. J. & Holmes, S. phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data. PLoS One 8, e61217, doi: 10.1371/journal.pone.0061217 (2013).
-
(2013)
PLoS One
, vol.8
-
-
McMurdie, P.J.1
Holmes, S.2
|