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Volumn 9, Issue 1, 2016, Pages

Exome sequencing in mostly consanguineous Arab families with neurologic disease provides a high potential molecular diagnosis rate

(23)  Charng, Wu Lin a,b   Karaca, Ender a,b   Coban Akdemir, Zeynep a,b   Gambin, Tomasz a,b   Atik, Mehmed M a,b   Gu, Shen a,b   Posey, Jennifer E a,b   Jhangiani, Shalini N a,b   Muzny, Donna M a,b   Doddapaneni, Harsha a,b   Hu, Jianhong a,b   Boerwinkle, Eric a,c   Gibbs, Richard A a,b   Rosenfeld, Jill A a,d   Cui, Hong a,d   Xia, Fan a,d   Manickam, Kandamurugu e   Yang, Yaping a,d   Faqeih, Eissa A f   Al Asmari, Ali f   more..


Author keywords

Copy Number Variants (CNV); Developmental Delay Intellectual Disability (DD ID); GRM7; Neurodevelopment; Whole exome sequencing (WES)

Indexed keywords

ARAB; ARTICLE; BRAIN MALFORMATION; CLINICAL ARTICLE; COMPUTER MODEL; CONSANGUINITY; CONTROLLED STUDY; COPY NUMBER VARIATION; DEVELOPMENTAL DISORDER; DISEASE ASSOCIATION; EXOME; FAMILY; FEMALE; FOXP4 GENE; GENE; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC DATABASE; GRM7 GENE; HETEROZYGOSITY LOSS; HUMAN; INTELLECTUAL IMPAIRMENT; KDM2B GENE; KIF5B GENE; MALE; MLLT1 GENE; MOLECULAR DIAGNOSIS; NEUROLOGIC DISEASE; PATHOGENICITY; PHENOTYPE; PRIORITY JOURNAL; SAUDI ARABIA; SINGLE NUCLEOTIDE POLYMORPHISM; WHOLE EXOME SEQUENCING; COHORT ANALYSIS; DATA MINING; DNA SEQUENCE; GENETICS; HIGH THROUGHPUT SEQUENCING; NERVOUS SYSTEM DISEASES; PEDIGREE;

EID: 84978477192     PISSN: None     EISSN: 17558794     Source Type: Journal    
DOI: 10.1186/s12920-016-0208-3     Document Type: Article
Times cited : (83)

References (38)
  • 2
    • 21144433992 scopus 로고    scopus 로고
    • Do we have brain to spare?
    • 15985565
    • Drachman DA. Do we have brain to spare? Neurology. 2005;64(12):2004-5.
    • (2005) Neurology , vol.64 , Issue.12 , pp. 2004-2005
    • Drachman, D.A.1
  • 3
    • 84902540391 scopus 로고    scopus 로고
    • Malformations of cortical development: Clinical features and genetic causes
    • 24932993
    • Guerrini R, Dobyns WB. Malformations of cortical development: clinical features and genetic causes. Lancet Neurol. 2014;13(7):710-26.
    • (2014) Lancet Neurol , vol.13 , Issue.7 , pp. 710-726
    • Guerrini, R.1    Dobyns, W.B.2
  • 9
    • 3543105225 scopus 로고    scopus 로고
    • Circular binary segmentation for the analysis of array-based DNA copy number data
    • 15475419
    • Olshen AB, Venkatraman ES, Lucito R, Wigler M. Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics. 2004;5(4):557-72.
    • (2004) Biostatistics , vol.5 , Issue.4 , pp. 557-572
    • Olshen, A.B.1    Venkatraman, E.S.2    Lucito, R.3    Wigler, M.4
  • 10
    • 84864609288 scopus 로고    scopus 로고
    • Copy number variation detection and genotyping from exome sequence data
    • 1:CAS:528:DC%2BC38XhtFOnsLrN 22585873 3409265
    • Krumm N, Sudmant PH, Ko A, O'Roak BJ, Malig M, Coe BP. Copy number variation detection and genotyping from exome sequence data. Genome Res. 2012;22(8):1525-32.
    • (2012) Genome Res , vol.22 , Issue.8 , pp. 1525-1532
    • Krumm, N.1    Sudmant, P.H.2    Ko, A.3    O'Roak, B.J.4    Malig, M.5    Coe, B.P.6
  • 11
    • 84928209346 scopus 로고    scopus 로고
    • Standards and guidelines for the interpretation of sequence variants: A joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
    • ACMG Laboratory Quality Assurance Committee 25741868 4544753
    • Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL, ACMG Laboratory Quality Assurance Committee. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 2015;17(5):405-24.
    • (2015) Genet Med , vol.17 , Issue.5 , pp. 405-424
    • Richards, S.1    Aziz, N.2    Bale, S.3    Bick, D.4    Das, S.5    Gastier-Foster, J.6    Grody, W.W.7    Hegde, M.8    Lyon, E.9    Spector, E.10    Voelkerding, K.11    Rehm, H.L.12
  • 13
    • 84925851486 scopus 로고    scopus 로고
    • New tools for Mendelian disease gene identification: PhenoDB variant analysis module; And GeneMatcher, a web-based tool for linking investigators with an interest in the same gene
    • 25684268 4820250
    • Sobreira N, Schiettecatte F, Boehm C, Valle D, Hamosh A. New tools for Mendelian disease gene identification: PhenoDB variant analysis module; and GeneMatcher, a web-based tool for linking investigators with an interest in the same gene. Hum Mutat. 2015;36(4):425-31.
    • (2015) Hum Mutat , vol.36 , Issue.4 , pp. 425-431
    • Sobreira, N.1    Schiettecatte, F.2    Boehm, C.3    Valle, D.4    Hamosh, A.5
  • 14
    • 84875514203 scopus 로고    scopus 로고
    • PhenoDB: A new web-based tool for the collection, storage, and analysis of phenotypic features
    • 1:CAS:528:DC%2BC3sXksFKrsLw%3D 23378291 3627299
    • Hamosh A, Sobreira N, Hoover-Fong J, et al. PhenoDB: a new web-based tool for the collection, storage, and analysis of phenotypic features. Hum Mutat. 2013;34(4):566-71.
    • (2013) Hum Mutat , vol.34 , Issue.4 , pp. 566-571
    • Hamosh, A.1    Sobreira, N.2    Hoover-Fong, J.3
  • 15
    • 0037031948 scopus 로고    scopus 로고
    • Identification and characterization of RPK118, a novel sphingosine kinase-1-binding protein
    • 1:CAS:528:DC%2BD38Xnt1Slu7w%3D 12077123
    • Hayashi S, Okada T, Igarashi N, Fujita T, Jahangeer S, Nakamura S. Identification and characterization of RPK118, a novel sphingosine kinase-1-binding protein. J Biol Chem. 2002;277(36):33319-24.
    • (2002) J Biol Chem , vol.277 , Issue.36 , pp. 33319-33324
    • Hayashi, S.1    Okada, T.2    Igarashi, N.3    Fujita, T.4    Jahangeer, S.5    Nakamura, S.6
  • 16
    • 28544437478 scopus 로고    scopus 로고
    • Essential role for sphingosine kinases in neural and vascular development
    • 1:CAS:528:DC%2BD2MXhtlektr3N 16314531 1316977
    • Mizugishi K, Yamashita T, Olivera A, Miller GF, Spiegel S, Proia RL. Essential role for sphingosine kinases in neural and vascular development. Mol Cell Biol. 2005;25(24):11113-21.
    • (2005) Mol Cell Biol , vol.25 , Issue.24 , pp. 11113-11121
    • Mizugishi, K.1    Yamashita, T.2    Olivera, A.3    Miller, G.F.4    Spiegel, S.5    Proia, R.L.6
  • 17
    • 0028898906 scopus 로고
    • Light- and electron-microscopic localization of the glutamate receptor channel delta 2 subunit in the mouse Purkinje cell
    • 1:CAS:528:DyaK2MXkvValu7k%3D 7792064
    • Takayama C, Nakagawa S, Watanabe M, Mishina M, Inoue Y. Light- and electron-microscopic localization of the glutamate receptor channel delta 2 subunit in the mouse Purkinje cell. Neurosci Lett. 1995;188(2):89-92.
    • (1995) Neurosci Lett , vol.188 , Issue.2 , pp. 89-92
    • Takayama, C.1    Nakagawa, S.2    Watanabe, M.3    Mishina, M.4    Inoue, Y.5
  • 18
    • 0036079961 scopus 로고    scopus 로고
    • The leukemia-associated gene Mllt1/ENL: Characterization of a murine homolog and demonstration of an essential role in embryonic development
    • 12367585
    • Doty RT, Vanasse GJ, Disteche CM, Willerford DM. The leukemia-associated gene Mllt1/ENL: characterization of a murine homolog and demonstration of an essential role in embryonic development. Blood Cells Mol Dis. 2002;28(3):407-17.
    • (2002) Blood Cells Mol Dis , vol.28 , Issue.3 , pp. 407-417
    • Doty, R.T.1    Vanasse, G.J.2    Disteche, C.M.3    Willerford, D.M.4
  • 20
    • 36049022778 scopus 로고    scopus 로고
    • JHDM1B/FBXL10 is a nucleolar protein that represses transcription of ribosomal RNA genes
    • 1:CAS:528:DC%2BD2sXht1yntrjL 17994099
    • Frescas D, Guardavaccaro D, Bassermann F, Koyama-Nasu R, Pagano M. JHDM1B/FBXL10 is a nucleolar protein that represses transcription of ribosomal RNA genes. Nature. 2007;450(7167):309-13.
    • (2007) Nature , vol.450 , Issue.7167 , pp. 309-313
    • Frescas, D.1    Guardavaccaro, D.2    Bassermann, F.3    Koyama-Nasu, R.4    Pagano, M.5
  • 21
    • 55549147132 scopus 로고    scopus 로고
    • The H3K36 demethylase Jhdm1b/Kdm2b regulates cell proliferation and senescence through p15(Ink4b)
    • 1:CAS:528:DC%2BD1cXhtlalsLzP 18836456 2612995
    • He J, Kallin EM, Tsukada Y, Zhang Y. The H3K36 demethylase Jhdm1b/Kdm2b regulates cell proliferation and senescence through p15(Ink4b). Nat Struct Mol Biol. 2008;15(11):1169-75.
    • (2008) Nat Struct Mol Biol , vol.15 , Issue.11 , pp. 1169-1175
    • He, J.1    Kallin, E.M.2    Tsukada, Y.3    Zhang, Y.4
  • 23
    • 4644306118 scopus 로고    scopus 로고
    • Advanced cardiac morphogenesis does not require heart tube fusion
    • 1:CAS:528:DC%2BD2cXntlGrsr0%3D 15361625
    • Li S, Zhou D, Lu MM, Morrisey EE. Advanced cardiac morphogenesis does not require heart tube fusion. Science. 2004;305(5690):1619-22.
    • (2004) Science , vol.305 , Issue.5690 , pp. 1619-1622
    • Li, S.1    Zhou, D.2    Lu, M.M.3    Morrisey, E.E.4
  • 28
    • 4143088149 scopus 로고    scopus 로고
    • Kinesin transports RNA: Isolation and characterization of an RNA-transporting granule
    • 1:CAS:528:DC%2BD2cXnsVeitbs%3D 15312650
    • Kanai Y, Dohmae N, Hirokawa N. Kinesin transports RNA: isolation and characterization of an RNA-transporting granule. Neuron. 2004;43(4):513-25.
    • (2004) Neuron , vol.43 , Issue.4 , pp. 513-525
    • Kanai, Y.1    Dohmae, N.2    Hirokawa, N.3
  • 29
    • 0032568790 scopus 로고    scopus 로고
    • Targeted disruption of mouse conventional kinesin heavy chain, kif5B, results in abnormal perinuclear clustering of mitochondria
    • 1:CAS:528:DyaK1cXksVSqs7Y%3D 9657148
    • Tanaka Y, Kanai Y, Okada Y, Nonaka S, Takeda S, Harada A, Hirokawa N. Targeted disruption of mouse conventional kinesin heavy chain, kif5B, results in abnormal perinuclear clustering of mitochondria. Cell. 1998;93(7):1147-58.
    • (1998) Cell , vol.93 , Issue.7 , pp. 1147-1158
    • Tanaka, Y.1    Kanai, Y.2    Okada, Y.3    Nonaka, S.4    Takeda, S.5    Harada, A.6    Hirokawa, N.7
  • 31
    • 0031880046 scopus 로고    scopus 로고
    • Hypothesis: Is infantile autism a hypoglutamatergic disorder? Relevance of glutamate - Serotonin interactions for pharmacotherapy
    • 1:STN:280:DyaK1czosF2gtg%3D%3D 9720980
    • Carlsson ML. Hypothesis: is infantile autism a hypoglutamatergic disorder? Relevance of glutamate - serotonin interactions for pharmacotherapy. J Neural Transm. 1998;105(4-5):525-35.
    • (1998) J Neural Transm , vol.105 , Issue.4-5 , pp. 525-535
    • Carlsson, M.L.1
  • 34
    • 84872339618 scopus 로고    scopus 로고
    • Role of metabotropic glutamate receptor 7 in autism spectrum disorders: A pilot study
    • 1:CAS:528:DC%2BC38XhvVektL3L 23201551
    • Yang Y, Pan C. Role of metabotropic glutamate receptor 7 in autism spectrum disorders: a pilot study. Life Sci. 2013;92(2):149-53.
    • (2013) Life Sci , vol.92 , Issue.2 , pp. 149-153
    • Yang, Y.1    Pan, C.2
  • 35
    • 84929291791 scopus 로고    scopus 로고
    • GRM7 Regulates Embryonic Neurogenesis via CREB and YAP
    • 1:CAS:528:DC%2BC2MXnt1Smsrw%3D 25921811 4437472
    • Xia W, Liu Y, Jiao J. GRM7 Regulates Embryonic Neurogenesis via CREB and YAP. Stem Cell Reports. 2015;4(5):795-810.
    • (2015) Stem Cell Reports , vol.4 , Issue.5 , pp. 795-810
    • Xia, W.1    Liu, Y.2    Jiao, J.3
  • 37
    • 0037023745 scopus 로고    scopus 로고
    • Slac2-a/melanophilin, the missing link between Rab27 and myosin Va: Implications of a tripartite protein complex for melanosome transport
    • 1:CAS:528:DC%2BD38XivVersrw%3D 11856727
    • Fukuda M, Kuroda TS, Mikoshiba K. Slac2-a/melanophilin, the missing link between Rab27 and myosin Va: implications of a tripartite protein complex for melanosome transport. J Biol Chem. 2002;277(14):12432-6.
    • (2002) J Biol Chem , vol.277 , Issue.14 , pp. 12432-12436
    • Fukuda, M.1    Kuroda, T.S.2    Mikoshiba, K.3
  • 38
    • 78650515235 scopus 로고    scopus 로고
    • Myosin-Va transports the endoplasmic reticulum into the dendritic spines of Purkinje neurons
    • 1:CAS:528:DC%2BC3cXhsFyksrrM 21151132
    • Wagner W, Brenowitz SD, Hammer 3rd JA. Myosin-Va transports the endoplasmic reticulum into the dendritic spines of Purkinje neurons. Nat Cell Biol. 2011;13(1):40-8.
    • (2011) Nat Cell Biol , vol.13 , Issue.1 , pp. 40-48
    • Wagner, W.1    Brenowitz, S.D.2    Hammer, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.