-
1
-
-
77952316386
-
On the composition of the preimmune repertoire of T cells specific for peptide-major histocompatibility complex ligands
-
Jenkins M.K., Chu H.H., McLachlan J.B., & Moon J.J. On the composition of the preimmune repertoire of T cells specific for peptide-major histocompatibility complex ligands. Annu. Rev. Immunol. 28, 275-294 (2010).
-
(2010)
Annu. Rev. Immunol.
, vol.28
, pp. 275-294
-
-
Jenkins, M.K.1
Chu, H.H.2
McLachlan, J.B.3
Moon, J.J.4
-
2
-
-
84896501298
-
Aging and cytomegalovirus infection differentially and jointly affect distinct circulating T cell subsets in humans
-
Wertheimer A.M., et al. Aging and cytomegalovirus infection differentially and jointly affect distinct circulating T cell subsets in humans. J. Immunol. 192, 2143-2155 (2014).
-
(2014)
J. Immunol.
, vol.192
, pp. 2143-2155
-
-
Wertheimer, A.M.1
-
3
-
-
46249132015
-
Ageing and life-long maintenance of T-cell subsets in the face of latent persistent infections
-
Nikolich-Zugich J. Ageing and life-long maintenance of T-cell subsets in the face of latent persistent infections. Nat. Rev. Immunol. 8, 512-522 (2008).
-
(2008)
Nat. Rev. Immunol.
, vol.8
, pp. 512-522
-
-
Nikolich-Zugich, J.1
-
4
-
-
84907001176
-
Diversity and clonal selection in the human T-cell repertoire
-
Qi Q., et al. Diversity and clonal selection in the human T-cell repertoire. Proc. Natl. Acad. Sci. USA 111, 13139-13144 (2014).
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 13139-13144
-
-
Qi, Q.1
-
5
-
-
1142275269
-
Age-related changes in lymphocyte development and function
-
Linton P.J., & Dorshkind K. Age-related changes in lymphocyte development and function. Nat. Immunol. 5, 133-139 (2004).
-
(2004)
Nat. Immunol.
, vol.5
, pp. 133-139
-
-
Linton, P.J.1
Dorshkind, K.2
-
6
-
-
20344364855
-
Immunosenescence: A problem of lymphopoiesis, homeostasis, microenvironment, and signaling
-
Cambier J. Immunosenescence: A problem of lymphopoiesis, homeostasis, microenvironment, and signaling. Immunol. Rev. 205, 5-6 (2005).
-
(2005)
Immunol. Rev.
, vol.205
, pp. 5-6
-
-
Cambier, J.1
-
7
-
-
23944441502
-
T cell development and receptor diversity during aging
-
Goronzy J.J., & Weyand C.M. T cell development and receptor diversity during aging. Curr. Opin. Immunol. 17, 468-475 (2005).
-
(2005)
Curr. Opin. Immunol.
, vol.17
, pp. 468-475
-
-
Goronzy, J.J.1
Weyand, C.M.2
-
8
-
-
0033982069
-
Effect of aging on T lymphocyte activation
-
Miller R.A. Effect of aging on T lymphocyte activation. Vaccine 18, 1654-1660 (2000).
-
(2000)
Vaccine
, vol.18
, pp. 1654-1660
-
-
Miller, R.A.1
-
9
-
-
0037425564
-
Mortality associated with influenza and respiratory syncytial virus in the United States
-
Thompson W.W., et al. Mortality associated with influenza and respiratory syncytial virus in the United States. J. Am. Med. Assoc. 289, 179-186 (2003).
-
(2003)
J. Am. Med. Assoc.
, vol.289
, pp. 179-186
-
-
Thompson, W.W.1
-
11
-
-
84868197943
-
Changes in primary lymphoid organs with aging
-
Chinn I.K., Blackburn C.C., Manley N.R., & Sempowski G.D. Changes in primary lymphoid organs with aging. Semin. Immunol. 24, 309-320 (2012).
-
(2012)
Semin. Immunol.
, vol.24
, pp. 309-320
-
-
Chinn, I.K.1
Blackburn, C.C.2
Manley, N.R.3
Sempowski, G.D.4
-
12
-
-
84921634186
-
Aging of the T cell compartment in mice and humans: From no naive expectations to foggy memories
-
Nikolich-Zugich J. Aging of the T cell compartment in mice and humans: from no naive expectations to foggy memories. J. Immunol. 193, 2622-2629 (2014).
-
(2014)
J. Immunol.
, vol.193
, pp. 2622-2629
-
-
Nikolich-Zugich, J.1
-
14
-
-
84857647499
-
Standardizing immunophenotyping for the Human Immunology Project
-
Maecker H.T., McCoy J.P., & Nussenblatt R. Standardizing immunophenotyping for the Human Immunology Project. Nat. Rev. Immunol. 12, 191-200 2012).
-
(2012)
Nat. Rev. Immunol.
, vol.12
, pp. 191-200
-
-
Maecker, H.T.1
McCoy, J.P.2
Nussenblatt, R.3
-
15
-
-
2142730100
-
Central memory and effector memory T cell subsets: Function, generation, and maintenance
-
Sallusto F., Geginat J., & Lanzavecchia A. Central memory and effector memory T cell subsets: function, generation, and maintenance. Annu. Rev. Immunol. 22, 745-763 (2004).
-
(2004)
Annu. Rev. Immunol.
, vol.22
, pp. 745-763
-
-
Sallusto, F.1
Geginat, J.2
Lanzavecchia, A.3
-
16
-
-
0036550559
-
Effector and memory T-cell differentiation: Implications for vaccine development
-
Kaech S.M., Wherry E.J., & Ahmed R. Effector and memory T-cell differentiation: implications for vaccine development. Nat. Rev. Immunol. 2, 251-262 (2002).
-
(2002)
Nat. Rev. Immunol.
, vol.2
, pp. 251-262
-
-
Kaech, S.M.1
Wherry, E.J.2
Ahmed, R.3
-
17
-
-
0037124366
-
Interleukin (IL)-15 and IL-7 jointly regulate homeostatic proliferation of memory phenotype CD8+ cells but are not required for memory phenotype CD4+ cells
-
Tan J.T., et al. Interleukin (IL)-15 and IL-7 jointly regulate homeostatic proliferation of memory phenotype CD8+ cells but are not required for memory phenotype CD4+ cells. J. Exp. Med. 195, 1523-1532 (2002).
-
(2002)
J. Exp. Med.
, vol.195
, pp. 1523-1532
-
-
Tan, J.T.1
-
18
-
-
84856278095
-
Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within A continuum of CD8+ T cell phenotypes
-
Newell E.W., Sigal N., Bendall S.C., Nolan G.P., & Davis M.M. Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within A continuum of CD8+ T cell phenotypes. Immunity 36, 142-152 (2012).
-
(2012)
Immunity
, vol.36
, pp. 142-152
-
-
Newell, E.W.1
Sigal, N.2
Bendall, S.C.3
Nolan, G.P.4
Davis, M.M.5
-
19
-
-
0028181865
-
Role of alpha 4-integrins in lymphocyte homing to mucosal tissues in vivo
-
Hamann A., Andrew D.P., Jablonski-Westrich D., Holzmann B., & Butcher E.C. Role of alpha 4-integrins in lymphocyte homing to mucosal tissues in vivo. J. Immunol. 152, 3282-3293 (1994).
-
(1994)
J. Immunol.
, vol.152
, pp. 3282-3293
-
-
Hamann, A.1
Andrew, D.P.2
Jablonski-Westrich, D.3
Holzmann, B.4
Butcher, E.C.5
-
20
-
-
84890424358
-
Cutting edge: Central memory CD8 T cells in aged mice are virtual memory cells
-
Chiu B.C., Martin B.E., Stolberg V.R., & Chensue S.W. Cutting edge: Central memory CD8 T cells in aged mice are virtual memory cells. J. Immunol. 191, 5793-5796 (2013).
-
(2013)
J. Immunol.
, vol.191
, pp. 5793-5796
-
-
Chiu, B.C.1
Martin, B.E.2
Stolberg, V.R.3
Chensue, S.W.4
-
21
-
-
0031848322
-
Immunohistochemical study of the β-chemokine receptors CCR3 and CCR5 and their ligands in normal and Alzheimer?s disease brains
-
Xia M.Q., Qin S.X., Wu L.J., Mackay C.R., & Hyman B.T. Immunohistochemical study of the β-chemokine receptors CCR3 and CCR5 and their ligands in normal and Alzheimer?s disease brains. Am. J. Pathol. 153, 31-37 (1998).
-
(1998)
Am. J. Pathol.
, vol.153
, pp. 31-37
-
-
Xia, M.Q.1
Qin, S.X.2
Wu, L.J.3
Mackay, C.R.4
Hyman, B.T.5
-
22
-
-
51049092467
-
Small intestinal CD103+ dendritic cells display unique functional properties that are conserved between mice and humans
-
Jaensson E., et al. Small intestinal CD103+ dendritic cells display unique functional properties that are conserved between mice and humans. J. Exp. Med. 205, 2139-2149 (2008).
-
(2008)
J. Exp. Med.
, vol.205
, pp. 2139-2149
-
-
Jaensson, E.1
-
23
-
-
65249134069
-
Memory T cells in nonlymphoid tissue that provide enhanced local immunity during infection with herpes simplex virus
-
Gebhardt T., et al. Memory T cells in nonlymphoid tissue that provide enhanced local immunity during infection with herpes simplex virus. Nat. Immunol. 10, 524-530 (2009).
-
(2009)
Nat. Immunol.
, vol.10
, pp. 524-530
-
-
Gebhardt, T.1
-
24
-
-
0035873514
-
An IFN-γ-dependent pathway controls stimulation of memory phenotype CD8+ T cell turnover in vivo by IL-12, IL-18, and IFN-γ
-
Tough D.F., Zhang X., & Sprent J. An IFN-γ-dependent pathway controls stimulation of memory phenotype CD8+ T cell turnover in vivo by IL-12, IL-18, and IFN-γ. J. Immunol. 166, 6007-6011 (2001).
-
(2001)
J. Immunol.
, vol.166
, pp. 6007-6011
-
-
Tough, D.F.1
Zhang, X.2
Sprent, J.3
-
25
-
-
0034677646
-
A novel transcription factor T-bet, directs Th1 lineage commitment
-
Szabo S.J., et al. A novel transcription factor T-bet, directs Th1 lineage commitment. Cell 100, 655-669 (2000).
-
(2000)
Cell
, vol.100
, pp. 655-669
-
-
Szabo, S.J.1
-
26
-
-
84905505150
-
Characterization of T-bet and eomes in peripheral human immune cells
-
Knox J.J., Cosma G.L., Betts M.R., & McLane L.M. Characterization of T-bet and eomes in peripheral human immune cells. Front. Immunol. 5, 217 (2014).
-
(2014)
Front. Immunol.
, vol.5
, pp. 217
-
-
Knox, J.J.1
Cosma, G.L.2
Betts, M.R.3
McLane, L.M.4
-
28
-
-
0036109159
-
Memory CD8+ T cells vary in differentiation phenotype in different persistent virus infections
-
Appay V., et al. Memory CD8+ T cells vary in differentiation phenotype in different persistent virus infections. Nat. Med. 8, 379-385 (2002).
-
(2002)
Nat. Med.
, vol.8
, pp. 379-385
-
-
Appay, V.1
-
29
-
-
0028303166
-
A new gene coding for A differentiation antigen recognized by autologous cytolytic T lymphocytes on HLA-A2 melanomas
-
Coulie P.G., et al. A new gene coding for A differentiation antigen recognized by autologous cytolytic T lymphocytes on HLA-A2 melanomas. J. Exp. Med. 180, 35-42 (1994).
-
(1994)
J. Exp. Med.
, vol.180
, pp. 35-42
-
-
Coulie, P.G.1
-
30
-
-
2242419092
-
Direct link between MHC polymorphism T cell avidity, and diversity in immune defense
-
Messaoudi I., Guevara Patiño J.A., Dyall R., LeMaoult J., & Nikolich-Zugich J. Direct link between MHC polymorphism T cell avidity, and diversity in immune defense. Science 298, 1797-1800 (2002).
-
(2002)
Science
, vol.298
, pp. 1797-1800
-
-
Messaoudi, I.1
Guevara Patiño, J.A.2
Dyall, R.3
LeMaoult, J.4
Nikolich-Zugich, J.5
-
31
-
-
34548038390
-
Naive CD4+ T cell frequency varies for different epitopes and predicts repertoire diversity and response magnitude
-
Moon J.J., et al. Naive CD4+ T cell frequency varies for different epitopes and predicts repertoire diversity and response magnitude. Immunity 27, 203-213 (2007).
-
(2007)
Immunity
, vol.27
, pp. 203-213
-
-
Moon, J.J.1
-
32
-
-
38049174331
-
Dramatic increase in naive T cell turnover is linked to loss of naive T cells from old primates
-
Cicin-Sain L., et al. Dramatic increase in naive T cell turnover is linked to loss of naive T cells from old primates. Proc. Natl. Acad. Sci. USA 104, 19960-19965 (2007).
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 19960-19965
-
-
Cicin-Sain, L.1
-
33
-
-
0030691757
-
Phenotypic and functional separation of memory and effector human CD8+ T cells
-
Hamann D., et al. Phenotypic and functional separation of memory and effector human CD8+ T cells. J. Exp. Med. 186, 1407-1418 (1997).
-
(1997)
J. Exp. Med.
, vol.186
, pp. 1407-1418
-
-
Hamann, D.1
-
34
-
-
84862676726
-
A deep profiler?s guide to cytometry
-
Bendall S.C., Nolan G.P., Roederer M., & Chattopadhyay P.K. A deep profiler?s guide to cytometry. Trends Immunol. 33, 323-332 (2012).
-
(2012)
Trends Immunol.
, vol.33
, pp. 323-332
-
-
Bendall, S.C.1
Nolan, G.P.2
Roederer, M.3
Chattopadhyay, P.K.4
-
35
-
-
30844436779
-
Multiple cellular antigen detection by ICP-MS
-
Ornatsky O., Baranov V.I., Bandura D.R., Tanner S.D., & Dick J. Multiple cellular antigen detection by ICP-MS. J. Immunol. Methods 308, 68-76 (2006).
-
(2006)
J. Immunol. Methods
, vol.308
, pp. 68-76
-
-
Ornatsky, O.1
Baranov, V.I.2
Bandura, D.R.3
Tanner, S.D.4
Dick, J.5
-
36
-
-
84918506186
-
Tissue-resident memory T cells
-
Schenkel J.M., & Masopust D. Tissue-resident memory T cells. Immunity 41, 886-897 (2014).
-
(2014)
Immunity
, vol.41
, pp. 886-897
-
-
Schenkel, J.M.1
Masopust, D.2
-
37
-
-
80053997259
-
A human memory T cell subset with stem cell-like properties
-
Gattinoni L., et al. A human memory T cell subset with stem cell-like properties. Nat. Med. 17, 1290-1297 (2011).
-
(2011)
Nat. Med.
, vol.17
, pp. 1290-1297
-
-
Gattinoni, L.1
-
38
-
-
63049130261
-
Human CD4+ T cell recent thymic emigrants are identified by protein tyrosine kinase 7 and have reduced immune function
-
Haines C.J., et al. Human CD4+ T cell recent thymic emigrants are identified by protein tyrosine kinase 7 and have reduced immune function. J. Exp. Med. 206, 275-285 (2009).
-
(2009)
J. Exp. Med.
, vol.206
, pp. 275-285
-
-
Haines, C.J.1
-
39
-
-
20344398446
-
Characterization of subsets of CD4+ memory T cells reveals early branched pathways of T cell differentiation in humans
-
Song K., et al. Characterization of subsets of CD4+ memory T cells reveals early branched pathways of T cell differentiation in humans. Proc. Natl. Acad. Sci. USA 102, 7916-7921 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7916-7921
-
-
Song, K.1
-
40
-
-
70449474686
-
A distinct subset of self-renewing human memory CD8+ T cells survives cytotoxic chemotherapy
-
Turtle C.J., Swanson H.M., Fujii N., Estey E.H., & Riddell S.R. A distinct subset of self-renewing human memory CD8+ T cells survives cytotoxic chemotherapy. Immunity 31, 834-844 (2009).
-
(2009)
Immunity
, vol.31
, pp. 834-844
-
-
Turtle, C.J.1
Swanson, H.M.2
Fujii, N.3
Estey, E.H.4
Riddell, S.R.5
-
41
-
-
70350458112
-
Adoptively transferred effector cells derived from naive rather than central memory CD8v T cells mediate superior antitumor immunity
-
Hinrichs C.S., et al. Adoptively transferred effector cells derived from naive rather than central memory CD8v T cells mediate superior antitumor immunity. Proc. Natl. Acad. Sci. USA 106, 17469-17474 (2009).
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 17469-17474
-
-
Hinrichs, C.S.1
-
42
-
-
84916878855
-
West Nile virus nucleic acid persistence in whole blood months after clearance in plasma: Implication for transfusion and transplantation safety
-
Lanteri M.C., et al. West Nile virus nucleic acid persistence in whole blood months after clearance in plasma: implication for transfusion and transplantation safety. Transfusion 54, 3232-3241 (2014).
-
(2014)
Transfusion
, vol.54
, pp. 3232-3241
-
-
Lanteri, M.C.1
-
43
-
-
0035198096
-
Analysis of total human immunodeficiency virus (HIV)-specific CD4+ and CD8+ T-cell responses: Relationship to viral load in untreated HIV infection
-
Betts M.R., et al. Analysis of total human immunodeficiency virus (HIV)-specific CD4+ and CD8+ T-cell responses: relationship to viral load in untreated HIV infection. J. Virol. 75, 11983-11991 (2001).
-
(2001)
J. Virol.
, vol.75
, pp. 11983-11991
-
-
Betts, M.R.1
-
44
-
-
80054768631
-
Extracting A cellular hierarchy from high-dimensional cytometry data with SPADE
-
Qiu P., et al. Extracting A cellular hierarchy from high-dimensional cytometry data with SPADE. Nat. Biotechnol. 29, 886-891 (2011).
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 886-891
-
-
Qiu, P.1
-
45
-
-
84924390097
-
Multifunctional cytomegalovirus (CMV)-specific CD8+ T cells are not restricted by telomere-related senescence in young or old adults
-
Riddell N.E., et al. Multifunctional cytomegalovirus (CMV)-specific CD8+ T cells are not restricted by telomere-related senescence in young or old adults. Immunology 144, 549-560 (2015).
-
(2015)
Immunology
, vol.144
, pp. 549-560
-
-
Riddell, N.E.1
-
46
-
-
0032561794
-
LNA (locked nucleic acid): An RNA mimic forming exceedingly stable LNA:LNA duplexes
-
Koshkin A.A., et al. LNA (locked nucleic acid): an RNA mimic forming exceedingly stable LNA:LNA duplexes. J. Am. Chem. Soc. 120, 13252-13253 (1998).
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 13252-13253
-
-
Koshkin, A.A.1
-
47
-
-
84876996918
-
TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim D., et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 14, R36 (2013).
-
(2013)
Genome Biol.
, vol.14
, pp. R36
-
-
Kim, D.1
-
48
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love M.I., Huber W., & Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 550 (2014).
-
(2014)
Genome Biol.
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
49
-
-
67650064594
-
The consensus coding sequence (CCDS) project: Identifying A common protein-coding gene set for the human and mouse genomes
-
Pruitt K.D., et al. The consensus coding sequence (CCDS) project: Identifying A common protein-coding gene set for the human and mouse genomes. Genome Res. 19, 1316-1323 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 1316-1323
-
-
Pruitt, K.D.1
|