-
1
-
-
34548172024
-
Cellular palmitoylation and trafficking of lipidated peptides
-
Draper, J. M., Xia, Z. & Smith, C. D. Cellular palmitoylation and trafficking of lipidated peptides. Journal of lipid research 48, 1873-1884, doi: 10.1194/jlr.M700179-JLR200 (2007).
-
(2007)
Journal of Lipid Research
, vol.48
, pp. 1873-1884
-
-
Draper, J.M.1
Xia, Z.2
Smith, C.D.3
-
3
-
-
3543099503
-
Palmitoylation of intracellular signaling proteins: Regulation and function
-
Smotrys, J. E. & Linder, M. E. Palmitoylation of intracellular signaling proteins: regulation and function. Annual review of biochemistry 73, 559-587, doi: 10.1146/annurev.biochem.73.011303.073954 (2004).
-
(2004)
Annual Review of Biochemistry
, vol.73
, pp. 559-587
-
-
Smotrys, J.E.1
Linder, M.E.2
-
4
-
-
7444255626
-
Membrane targeting of lipid modified signal transduction proteins
-
Resh, M. D. Membrane targeting of lipid modified signal transduction proteins. Sub-cellular biochemistry 37, 217-232 (2004).
-
(2004)
Sub-cellular Biochemistry
, vol.37
, pp. 217-232
-
-
Resh, M.D.1
-
5
-
-
77955033375
-
Greasing their way: Lipid modifications determine protein association with membrane rafts
-
Levental, I., Grzybek, M. & Simons, K. Greasing their way: lipid modifications determine protein association with membrane rafts. Biochemistry 49, 6305-6316, doi: 10.1021/bi100882y (2010).
-
(2010)
Biochemistry
, vol.49
, pp. 6305-6316
-
-
Levental, I.1
Grzybek, M.2
Simons, K.3
-
6
-
-
34848907786
-
Protein lipidation
-
Nadolski, M. J. & Linder, M. E. Protein lipidation. The FEBS journal 274, 5202-5210, doi: 10.1111/j.1742-4658.2007.06056.x (2007).
-
(2007)
The FEBS Journal
, vol.274
, pp. 5202-5210
-
-
Nadolski, M.J.1
Linder, M.E.2
-
7
-
-
0036290648
-
N-terminal N-myristoylation of proteins: Prediction of substrate proteins from amino acid sequence
-
Maurer-Stroh, S., Eisenhaber, B. & Eisenhaber, F. N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence. Journal of molecular biology 317, 541-557, doi: 10.1006/jmbi.2002.5426 (2002).
-
(2002)
Journal of Molecular Biology
, vol.317
, pp. 541-557
-
-
Maurer-Stroh, S.1
Eisenhaber, B.2
Eisenhaber, F.3
-
8
-
-
0023940746
-
The biology and enzymology of eukaryotic protein acylation
-
Towler, D. A., Gordon, J. I., Adams, S. P. & Glaser, L. The biology and enzymology of eukaryotic protein acylation. Annual review of biochemistry 57, 69-99, doi: 10.1146/annurev.bi.57.070188.000441 (1988).
-
(1988)
Annual Review of Biochemistry
, vol.57
, pp. 69-99
-
-
Towler, D.A.1
Gordon, J.I.2
Adams, S.P.3
Glaser, L.4
-
9
-
-
33646366606
-
Refinement and prediction of protein prenylation motifs
-
Maurer-Stroh, S. & Eisenhaber, F. Refinement and prediction of protein prenylation motifs. Genome biology 6, R55, doi: 10.1186/gb-2005-6-6-r55 (2005).
-
(2005)
Genome Biology
, vol.6
, pp. R55
-
-
Maurer-Stroh, S.1
Eisenhaber, F.2
-
10
-
-
70450224430
-
Identification of novel peptide substrates for protein farnesyltransferase reveals two substrate classes with distinct sequence selectivities
-
Hougland, J. L. et al. Identification of novel peptide substrates for protein farnesyltransferase reveals two substrate classes with distinct sequence selectivities. Journal of molecular biology 395, 176-190, doi: 10.1016/j.jmb.2009.10.038 (2010).
-
(2010)
Journal of Molecular Biology
, vol.395
, pp. 176-190
-
-
Hougland, J.L.1
-
11
-
-
84892708883
-
Targeted reengineering of protein geranylgeranyltransferase type I selectivity functionally implicates active-site residues in protein-substrate recognition
-
Gangopadhyay, S. A., Losito, E. L. & Hougland, J. L. Targeted reengineering of protein geranylgeranyltransferase type I selectivity functionally implicates active-site residues in protein-substrate recognition. Biochemistry 53, 434-446, doi: 10.1021/bi4011732 (2014).
-
(2014)
Biochemistry
, vol.53
, pp. 434-446
-
-
Gangopadhyay, S.A.1
Losito, E.L.2
Hougland, J.L.3
-
12
-
-
0029926493
-
Platelet-derived growth factor receptor tyrosine phosphorylation requires protein geranylgeranylation but not farnesylation
-
McGuire, T. F., Qian, Y., Vogt, A., Hamilton, A. D. & Sebti, S. M. Platelet-derived growth factor receptor tyrosine phosphorylation requires protein geranylgeranylation but not farnesylation. The Journal of biological chemistry 271, 27402-27407 (1996).
-
(1996)
The Journal of Biological Chemistry
, vol.271
, pp. 27402-27407
-
-
McGuire, T.F.1
Qian, Y.2
Vogt, A.3
Hamilton, A.D.4
Sebti, S.M.5
-
13
-
-
0035827351
-
Prenylation of rab GTPases: Molecular mechanisms and involvement in genetic disease
-
Pereira-Leal, J. B., Hume, A. N. & Seabra, M. C. Prenylation of Rab GTPases: molecular mechanisms and involvement in genetic disease. FEBS letters 498, 197-200 (2001).
-
(2001)
FEBS Letters
, vol.498
, pp. 197-200
-
-
Pereira-Leal, J.B.1
Hume, A.N.2
Seabra, M.C.3
-
14
-
-
84902655715
-
Rho2 palmitoylation is required for plasma membrane localization and proper signaling to the fission yeast cell integrity mitogen-activated protein kinase pathway
-
Sanchez-Mir, L. et al. Rho2 palmitoylation is required for plasma membrane localization and proper signaling to the fission yeast cell integrity mitogen-activated protein kinase pathway. Molecular and cellular biology 34, 2745-2759, doi: 10.1128/mcb.01515-13 (2014).
-
(2014)
Molecular and Cellular Biology
, vol.34
, pp. 2745-2759
-
-
Sanchez-Mir, L.1
-
15
-
-
0035825193
-
Differential localization of Rho GTPases in live cells: Regulation by hypervariable regions and RhoGDI binding
-
Michaelson, D. et al. Differential localization of Rho GTPases in live cells: regulation by hypervariable regions and RhoGDI binding. The Journal of cell biology 152, 111-126 (2001).
-
(2001)
The Journal of Cell Biology
, vol.152
, pp. 111-126
-
-
Michaelson, D.1
-
16
-
-
0034308228
-
Rho family GTPases: More than simple switches
-
Symons, M. & Settleman, J. Rho family GTPases: more than simple switches. Trends in cell biology 10, 415-419 (2000).
-
(2000)
Trends in Cell Biology
, vol.10
, pp. 415-419
-
-
Symons, M.1
Settleman, J.2
-
17
-
-
77951913833
-
The palmitoylation machinery is a spatially organizing system for peripheral membrane proteins
-
Rocks, O. et al. The palmitoylation machinery is a spatially organizing system for peripheral membrane proteins. Cell 141, 458-471, doi: 10.1016/j.cell.2010.04.007 (2010).
-
(2010)
Cell
, vol.141
, pp. 458-471
-
-
Rocks, O.1
-
18
-
-
0036676541
-
Distance-dependent cellular palmitoylation of denovo-designed sequences and their translocation to plasma membrane subdomains
-
Navarro-Lerida, I., Alvarez-Barrientos, A., Gavilanes, F. & Rodriguez-Crespo, I. Distance-dependent cellular palmitoylation of denovo-designed sequences and their translocation to plasma membrane subdomains. Journal of cell science 115, 3119-3130 (2002).
-
(2002)
Journal of Cell Science
, vol.115
, pp. 3119-3130
-
-
Navarro-Lerida, I.1
Alvarez-Barrientos, A.2
Gavilanes, F.3
Rodriguez-Crespo, I.4
-
19
-
-
0032744491
-
Functional roles for fatty acylated amino-terminal domains in subcellular localization
-
McCabe, J. B. & Berthiaume, L. G. Functional roles for fatty acylated amino-terminal domains in subcellular localization. Molecular biology of the cell 10, 3771-3786 (1999).
-
(1999)
Molecular Biology of the Cell
, vol.10
, pp. 3771-3786
-
-
McCabe, J.B.1
Berthiaume, L.G.2
-
20
-
-
0035200238
-
N-terminal protein acylation confers localization to cholesterol, sphingolipid-enriched membranes but not to lipid rafts/caveolae
-
McCabe, J. B. & Berthiaume, L. G. N-terminal protein acylation confers localization to cholesterol, sphingolipid-enriched membranes but not to lipid rafts/caveolae. Molecular biology of the cell 12, 3601-3617 (2001).
-
(2001)
Molecular Biology of the Cell
, vol.12
, pp. 3601-3617
-
-
McCabe, J.B.1
Berthiaume, L.G.2
-
21
-
-
35748956109
-
Stabilizing function for myristoyl group revealed by the crystal structure of a neuronal calcium sensor, guanylate cyclase-activating protein 1
-
Stephen, R., Bereta, G., Golczak, M., Palczewski, K. & Sousa, M. C. Stabilizing function for myristoyl group revealed by the crystal structure of a neuronal calcium sensor, guanylate cyclase-activating protein 1. Structure 15, 1392-1402, doi: 10.1016/j. str.2007.09.013 (2007).
-
(2007)
Structure
, vol.15
, pp. 1392-1402
-
-
Stephen, R.1
Bereta, G.2
Golczak, M.3
Palczewski, K.4
Sousa, M.C.5
-
22
-
-
77956621729
-
Myristoylation and membrane binding regulate c-src stability and kinase activity
-
Patwardhan, P. & Resh, M. D. Myristoylation and membrane binding regulate c-Src stability and kinase activity. Molecular and cellular biology 30, 4094-4107, doi: 10.1128/mcb.00246-10 (2010).
-
(2010)
Molecular and Cellular Biology
, vol.30
, pp. 4094-4107
-
-
Patwardhan, P.1
Resh, M.D.2
-
23
-
-
84857862291
-
Myristoylation exerts direct and allosteric effects on galpha conformation and dynamics in solution
-
Preininger, A. M. et al. Myristoylation exerts direct and allosteric effects on Galpha conformation and dynamics in solution. Biochemistry 51, 1911-1924, doi: 10.1021/bi201472c (2012).
-
(2012)
Biochemistry
, vol.51
, pp. 1911-1924
-
-
Preininger, A.M.1
-
24
-
-
3042804077
-
Evidence that the gene encoding ZDHHC8 contributes to the risk of schizophrenia
-
Mukai, J. et al. Evidence that the gene encoding ZDHHC8 contributes to the risk of schizophrenia. Nature genetics 36, 725-731, doi: 10.1038/ng1375 (2004).
-
(2004)
Nature Genetics
, vol.36
, pp. 725-731
-
-
Mukai, J.1
-
25
-
-
33745627659
-
Palmitoylation of huntingtin by HIP14 is essential for its trafficking and function
-
Yanai, A. et al. Palmitoylation of huntingtin by HIP14 is essential for its trafficking and function. Nature neuroscience 9, 824-831, doi: 10.1038/nn1702 (2006).
-
(2006)
Nature Neuroscience
, vol.9
, pp. 824-831
-
-
Yanai, A.1
-
26
-
-
1642340046
-
Myristoylation of viral and bacterial proteins
-
Maurer-Stroh, S. & Eisenhaber, F. Myristoylation of viral and bacterial proteins. Trends in microbiology 12, 178-185, doi: 10.1016/j. tim.2004.02.006 (2004).
-
(2004)
Trends in Microbiology
, vol.12
, pp. 178-185
-
-
Maurer-Stroh, S.1
Eisenhaber, F.2
-
27
-
-
54249148026
-
CSS-palm 2.0: An updated software for palmitoylation sites prediction
-
Ren, J. et al. CSS-Palm 2.0: an updated software for palmitoylation sites prediction. Protein engineering, design & selection : PEDS 21, 639-644, doi: 10.1093/protein/gzn039 (2008).
-
(2008)
Protein Engineering, Design & Selection : PEDS
, vol.21
, pp. 639-644
-
-
Ren, J.1
-
28
-
-
70350441865
-
Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs
-
Wang, X. B., Wu, L. Y., Wang, Y. C. & Deng, N. Y. Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs. Protein engineering, design & selection : PEDS 22, 707-712, doi: 10.1093/protein/gzp055 (2009).
-
(2009)
Protein Engineering, Design & Selection : PEDS
, vol.22
, pp. 707-712
-
-
Wang, X.B.1
Wu, L.Y.2
Wang, Y.C.3
Deng, N.Y.4
-
29
-
-
2942564436
-
N-terminal myristoylation predictions by ensembles of neural networks
-
Bologna, G., Yvon, C., Duvaud, S. & Veuthey, A. L. N-Terminal myristoylation predictions by ensembles of neural networks. Proteomics 4, 1626-1632, doi: 10.1002/pmic.200300783 (2004).
-
(2004)
Proteomics
, vol.4
, pp. 1626-1632
-
-
Bologna, G.1
Yvon, C.2
Duvaud, S.3
Veuthey, A.L.4
-
30
-
-
84875736923
-
Particle swarm optimization with an aging leader and challengers
-
Chen, W. N. et al. Particle Swarm Optimization With an Aging Leader and Challengers. Evolutionary Computation, IEEE Transactions on 17, 241-258, doi: 10.1109/TEVC.2011.2173577 (2013).
-
(2013)
Evolutionary Computation, IEEE Transactions on
, vol.17
, pp. 241-258
-
-
Chen, W.N.1
-
31
-
-
52649145895
-
GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy
-
Xue, Y. et al. GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy. Molecular & cellular proteomics : MCP 7, 1598-1608, doi: 10.1074/mcp.M700574-MCP200 (2008).
-
(2008)
Molecular & Cellular Proteomics : MCP
, vol.7
, pp. 1598-1608
-
-
Xue, Y.1
-
32
-
-
84904804885
-
GPS-SUMO: A tool for the prediction of sumoylation sites and SUMO-interaction motifs
-
Zhao, Q. et al. GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs. Nucleic acids research 42, W325-330, doi: 10.1093/nar/gku383 (2014).
-
(2014)
Nucleic Acids Research
, vol.42
, pp. W325-W330
-
-
Zhao, Q.1
-
33
-
-
0028306245
-
Genetic and biochemical studies of protein N-myristoylation
-
Johnson, D. R., Bhatnagar, R. S., Knoll, L. J. & Gordon, J. I. Genetic and biochemical studies of protein N-myristoylation. Annual review of biochemistry 63, 869-914, doi: 10.1146/annurev.bi.63.070194.004253 (1994).
-
(1994)
Annual Review of Biochemistry
, vol.63
, pp. 869-914
-
-
Johnson, D.R.1
Bhatnagar, R.S.2
Knoll, L.J.3
Gordon, J.I.4
-
34
-
-
0026644293
-
Myristoylation of the G alpha i2 polypeptide, a G protein alpha subunit, is required for its signaling and transformation functions
-
Gallego, C., Gupta, S. K., Winitz, S., Eisfelder, B. J. & Johnson, G. L. Myristoylation of the G alpha i2 polypeptide, a G protein alpha subunit, is required for its signaling and transformation functions. Proceedings of the National Academy of Sciences of the United States of America 89, 9695-9699 (1992).
-
(1992)
Proceedings of the National Academy of Sciences of the United States of America
, vol.89
, pp. 9695-9699
-
-
Gallego, C.1
Gupta, S.K.2
Winitz, S.3
Eisfelder, B.J.4
Johnson, G.L.5
-
35
-
-
33947266606
-
Activation status-coupled transient S acylation determines membrane partitioning of a plant rho-related GTPase
-
Sorek, N. et al. Activation status-coupled transient S acylation determines membrane partitioning of a plant Rho-related GTPase. Molecular and cellular biology 27, 2144-2154, doi: 10.1128/mcb.02347-06 (2007).
-
(2007)
Molecular and Cellular Biology
, vol.27
, pp. 2144-2154
-
-
Sorek, N.1
-
36
-
-
79551700407
-
Differential effects of prenylation and s-acylation on type I and II ROPS membrane interaction and function
-
Sorek, N. et al. Differential effects of prenylation and s-acylation on type I and II ROPS membrane interaction and function. Plant physiology 155, 706-720, doi: 10.1104/pp.110.166850 (2011).
-
(2011)
Plant Physiology
, vol.155
, pp. 706-720
-
-
Sorek, N.1
-
37
-
-
80054716502
-
Protein palmitoylation and subcellular trafficking
-
Aicart-Ramos, C., Valero, R. A. & Rodriguez-Crespo, I. Protein palmitoylation and subcellular trafficking. Biochimica et biophysica acta 1808, 2981-2994, doi: 10.1016/j.bbamem.2011.07.009 (2011).
-
(2011)
Biochimica et Biophysica Acta
, vol.1808
, pp. 2981-2994
-
-
Aicart-Ramos, C.1
Valero, R.A.2
Rodriguez-Crespo, I.3
-
38
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M. & Brenner, S. E. WebLogo: a sequence logo generator. Genome research 14, 1188-1190, doi: 10.1101/gr.849004 (2004).
-
(2004)
Genome Research
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
39
-
-
84870431038
-
CD-HIT: Accelerated for clustering the next-generation sequencing data
-
Fu, L., Niu, B., Zhu, Z., Wu, S. & Li, W. CD-HIT: accelerated for clustering the next-generation sequencing data. Bioinformatics 28, 3150-3152, doi: 10.1093/bioinformatics/bts565 (2012).
-
(2012)
Bioinformatics
, vol.28
, pp. 3150-3152
-
-
Fu, L.1
Niu, B.2
Zhu, Z.3
Wu, S.4
Li, W.5
|