-
1
-
-
79960999358
-
Need and potential of antimicrobial stewardship in community hospitals
-
Septimus EJ, Owens RC, Jr. 2011. Need and potential of antimicrobial stewardship in community hospitals. Clin. Infect. Dis. 53(Suppl 1): S8-S14. http://dx.doi.org/10.1093/cid/cir363.
-
(2011)
Clin. Infect. Dis.
, vol.53
, Issue.SUPPL. 1
-
-
Septimus, E.J.1
Owens Jr., R.C.2
-
2
-
-
84865531061
-
The shared antibiotic resistome of soil bacteria and human pathogens
-
Forsberg KJ, Reyes A, Wang B, Selleck EM, Sommer MO, Dantas G. 2012. The shared antibiotic resistome of soil bacteria and human pathogens. Science 337:1107-1111. http://dx.doi.org/10.1126/science.1220761.
-
(2012)
Science
, vol.337
, pp. 1107-1111
-
-
Forsberg, K.J.1
Reyes, A.2
Wang, B.3
Selleck, E.M.4
Sommer, M.O.5
Dantas, G.6
-
3
-
-
84861116189
-
Functional cloning and characterization of antibiotic resistance genes from the chicken gut microbiome
-
Zhou W, Wang Y, Lin J. 2012. Functional cloning and characterization of antibiotic resistance genes from the chicken gut microbiome. Appl. Environ. Microbiol. 78:3028-3032. http://dx.doi.org/10.1128/AEM.06920-11.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 3028-3032
-
-
Zhou, W.1
Wang, Y.2
Lin, J.3
-
4
-
-
0017811905
-
Emergence of antibiotic-resistant bacteria in the intestinal flora of farm inhabitants
-
Levy SB. 1978. Emergence of antibiotic-resistant bacteria in the intestinal flora of farm inhabitants. J. Infect. Dis. 137:689-690.
-
(1978)
J. Infect. Dis.
, vol.137
, pp. 689-690
-
-
Levy, S.B.1
-
5
-
-
84874494333
-
Diverse and abundant antibiotic resistance genes in Chinese swine farms
-
Zhu YG, Johnson TA, Su JQ, Qiao M, Guo GX, Stedtfeld RD, Hashsham SA, Tiedje JM. 2013. Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc. Natl. Acad. Sci. U. S. A. 110: 3435-3440. http://dx.doi.org/10.1073/pnas.1302581110.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 3435-3440
-
-
Zhu, Y.G.1
Johnson, T.A.2
Su, J.Q.3
Qiao, M.4
Guo, G.X.5
Stedtfeld, R.D.6
Hashsham, S.A.7
Tiedje, J.M.8
-
6
-
-
84880050412
-
Country-specific antibiotic use practices impact the human gut resistome
-
Forslund K, Sunagawa S, Kultima JR, Mende DR, Arumugam M, Typas A, Bork P. 2013. Country-specific antibiotic use practices impact the human gut resistome. Genome Res. 23:1163-1169. http://dx.doi.org/10.1 101/gr.155465.113.
-
(2013)
Genome Res.
, vol.23
, pp. 1163-1169
-
-
Forslund, K.1
Sunagawa, S.2
Kultima, J.R.3
Mende, D.R.4
Arumugam, M.5
Typas, A.6
Bork, P.7
-
7
-
-
84863242652
-
Staphylococcus aureus CC398: Host adaptation and emergence of methicillin resistance in livestock
-
e00305-11
-
Price LB, Stegger M, Hasman H, Aziz M, Larsen J, Andersen PS, Pearson T, Waters AE, Foster JT, Schupp J, Gillece J, Driebe E, Liu CM, Springer B, Zdovc I, Battisti A, Franco A, Zmudzki J, Schwarz S, Butaye P, Jouy E, Pomba C, Concepcion Porrero M, Ruimy R, Smith TC, Robinson DA, Weese JS, Sofia Arriola C, Yu F, Laurent F, Keim P, Skov R, Aarestrup FM. 2012. Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock. mBio 3:e00305-11. http://dx.doi.org/10.1128/mBio.00305-11.
-
(2012)
mBio
, vol.3
-
-
Price, L.B.1
Stegger, M.2
Hasman, H.3
Aziz, M.4
Larsen, J.5
Andersen, P.S.6
Pearson, T.7
Waters, A.E.8
Foster, J.T.9
Schupp, J.10
Gillece, J.11
Driebe, E.12
Liu, C.M.13
Springer, B.14
Zdovc, I.15
Battisti, A.16
Franco, A.17
Zmudzki, J.18
Schwarz, S.19
Butaye, P.20
Jouy, E.21
Pomba, C.22
Concepcion Porrero, M.23
Ruimy, R.24
Smith, T.C.25
Robinson, D.A.26
Weese, J.S.27
Sofia Arriola, C.28
Yu, F.29
Laurent, F.30
Keim, P.31
Skov, R.32
Aarestrup, F.M.33
more..
-
8
-
-
84887534043
-
Spread of multidrug-resistant Enterococcus to animals and humans: An underestimated role for the pig farm environment
-
Novais C, Freitas AR, Silveira E, Antunes P, Silva R, Coque TM, Peixe L. 2013. Spread of multidrug-resistant Enterococcus to animals and humans: an underestimated role for the pig farm environment. J. Antimicrob. Chemother. 68:2746-2754. http://dx.doi.org/10.1093/jac/dld289.
-
(2013)
J. Antimicrob. Chemother.
, vol.68
, pp. 2746-2754
-
-
Novais, C.1
Freitas, A.R.2
Silveira, E.3
Antunes, P.4
Silva, R.5
Coque, T.M.6
Peixe, L.7
-
9
-
-
79959306747
-
Antibiotic resistance gene spread due to manure application on agricultural fields
-
Heuer H, Schmitt H, Smalla K. 2011. Antibiotic resistance gene spread due to manure application on agricultural fields. Curr. Opin. Microbiol. 14:236-243. http://dx.doi.org/10.1016/j.mib.2011.04.009.
-
(2011)
Curr. Opin. Microbiol.
, vol.14
, pp. 236-243
-
-
Heuer, H.1
Schmitt, H.2
Smalla, K.3
-
10
-
-
79953196148
-
Diversity of multidrug-resistant Salmonella enterica strains associated with cattle at harvest in the United States
-
Brichta-Harhay DM, Arthur TM, Bosilevac JM, Kalchayanand N, Shackelford SD, Wheeler TL, Koohmaraie M. 2011. Diversity of multidrug-resistant Salmonella enterica strains associated with cattle at harvest in the United States. Appl. Environ. Microbiol. 77:1783-1796. http://dx.doi.org/10.1128/AEM.01885-10.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 1783-1796
-
-
Brichta-Harhay, D.M.1
Arthur, T.M.2
Bosilevac, J.M.3
Kalchayanand, N.4
Shackelford, S.D.5
Wheeler, T.L.6
Koohmaraie, M.7
-
11
-
-
0035142427
-
Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon
-
Shoemaker NB, Vlamakis H, Hayes K, Salyers AA. 2001. Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon. Appl. Environ. Microbiol. 67:561-568. http://dx.doi.org/10.1128/AEM.67.2.561-568.2001.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 561-568
-
-
Shoemaker, N.B.1
Vlamakis, H.2
Hayes, K.3
Salyers, A.A.4
-
12
-
-
35448965272
-
Transfer of an ampicillin resistance gene between two Escherichia coli strains in the bowel microbiota of an infant treated with antibiotics
-
Karami N, Martner A, Enne VI, Swerkersson S, Adlerberth I, Wold AE. 2007. Transfer of an ampicillin resistance gene between two Escherichia coli strains in the bowel microbiota of an infant treated with antibiotics. J. Antimicrob. Chemother. 60:1142-1145. http://dx.doi.org/10.1093/jac /dkm327.
-
(2007)
J. Antimicrob. Chemother.
, vol.60
, pp. 1142-1145
-
-
Karami, N.1
Martner, A.2
Enne, V.I.3
Swerkersson, S.4
Adlerberth, I.5
Wold, A.E.6
-
13
-
-
84899825038
-
-
NASS. Cornell University, Ithaca, NY, and USDA, Washington, DC
-
NASS. 2010. Cattle on feed. In USDA economics, statistics and market information system. Cornell University, Ithaca, NY, and USDA, Washington, DC.
-
(2010)
Cattle on feed. In USDA economics, statistics and market information system.
-
-
-
14
-
-
79953685920
-
Escherichia coli O157:H7: Animal reservoir and sources of human infection
-
Ferens WA, Hovde CJ. 2011. Escherichia coli O157:H7: animal reservoir and sources of human infection. Foodborne Pathog. Dis. 8:465-487. http://dx.doi.org/10.1089/fpd.2010.0673.
-
(2011)
Foodborne Pathog. Dis.
, vol.8
, pp. 465-487
-
-
Ferens, W.A.1
Hovde, C.J.2
-
15
-
-
16644376939
-
Outbreaks of enteric infections caused by multiple pathogens associated with calves at a farm day camp
-
Smith KE, Stenzel SA, Bender JB, Wagstrom E, Soderlund D, Leano FT, Taylor CM, Belle-Isle PA, Danila R. 2004. Outbreaks of enteric infections caused by multiple pathogens associated with calves at a farm day camp. Pediatr. Infect. Dis. J. 23:1098-1104. http://dx.doi.org/10.1097/01.inf.00 00145409.74116.e5.
-
(2004)
Pediatr. Infect. Dis. J.
, vol.23
, pp. 1098-1104
-
-
Smith, K.E.1
Stenzel, S.A.2
Bender, J.B.3
Wagstrom, E.4
Soderlund, D.5
Leano, F.T.6
Taylor, C.M.7
Belle-Isle, P.A.8
Danila, R.9
-
16
-
-
79959380037
-
Manure as a source of antibiotic-resistant Escherichia coli and enterococci: A case study of a Wisconsin, USA family dairy farm
-
Walczak JJ, Xu S. 2011. Manure as a source of antibiotic-resistant Escherichia coli and enterococci: a case study of a Wisconsin, USA family dairy farm. Water Air Soil Pollut. 219:579-589. http://dx.doi.org/10.1007/s112 70-010-0729-x.
-
(2011)
Water Air Soil Pollut.
, vol.219
, pp. 579-589
-
-
Walczak, J.J.1
Xu, S.2
-
17
-
-
33846161607
-
Antimicrobial-resistant enteric bacteria from dairy cattle
-
Sawant AA, Hegde NV, Straley BA, Donaldson SC, Love BC, Knabel SJ, Jayarao BM. 2007. Antimicrobial-resistant enteric bacteria from dairy cattle. Appl. Environ. Microbiol. 73:156-163. http://dx.doi.org/10.1128/ AEM.01551-06.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 156-163
-
-
Sawant, A.A.1
Hegde, N.V.2
Straley, B.A.3
Donaldson, S.C.4
Love, B.C.5
Knabel, S.J.6
Jayarao, B.M.7
-
18
-
-
34249050929
-
Monitoring and source tracking of tetracycline resistance genes in lagoons and groundwater adjacent to swine production facilities over a 3-year period
-
Koike S, Krapac IG, Oliver HD, Yannarell AC, Chee-Sanford JC, Aminov RI, Mackie RI. 2007. Monitoring and source tracking of tetracycline resistance genes in lagoons and groundwater adjacent to swine production facilities over a 3-year period. Appl. Environ. Microbiol. 73: 4813-4823. http://dx.doi.org/10.1128/AEM.00665-07.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4813-4823
-
-
Koike, S.1
Krapac, I.G.2
Oliver, H.D.3
Yannarell, A.C.4
Chee-Sanford, J.C.5
Aminov, R.I.6
McKie, R.I.7
-
19
-
-
79959722875
-
Real-time PCR methods for quantitative monitoring of streptomycin and tetracycline resistance genes in agricultural ecosystems
-
Walsh F, Ingenfeld A, Zampicolli M, Hilber-Bodmer M, Frey JE, Duffy B. 2011. Real-time PCR methods for quantitative monitoring of streptomycin and tetracycline resistance genes in agricultural ecosystems. J. Microbiol. Methods 86:150-155. http://dx.doi.org/10.1016/j.mimet.2011.04. 011.
-
(2011)
J. Microbiol. Methods
, vol.86
, pp. 150-155
-
-
Walsh, F.1
Ingenfeld, A.2
Zampicolli, M.3
Hilber-Bodmer, M.4
Frey, J.E.5
Duffy, B.6
-
20
-
-
84857135712
-
In-feed antibiotic effects on the swine intestinal microbiome
-
Looft T, Johnson TA, Allen HK, Bayles DO, Alt DP, Stedtfeld RD, Sul WJ, Stedtfeld TM, Chai B, Cole JR, Hashsham SA, Tiedje JM, Stanton TB. 2012. In-feed antibiotic effects on the swine intestinal microbiome. Proc. Natl. Acad. Sci. U. S. A. 109:1691-1696. http://dx.doi.org/10.1073 /pnas.1120238109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 1691-1696
-
-
Looft, T.1
Johnson, T.A.2
Allen, H.K.3
Bayles, D.O.4
Alt, D.P.5
Stedtfeld, R.D.6
Sul, W.J.7
Stedtfeld, T.M.8
Chai, B.9
Cole, J.R.10
Hashsham, S.A.11
Tiedje, J.M.12
Stanton, T.B.13
-
21
-
-
63849172530
-
Spreading antibiotic resistance through spread manure: Characteristics of a novel plasmid type with low %G_C content
-
Heuer H, Kopmann C, Binh CT, Top EM, Smalla K. 2009. Spreading antibiotic resistance through spread manure: characteristics of a novel plasmid type with low %G_C content. Environ. Microbiol. 11:937-949. http://dx.doi.org/10.1111/j.1462-2920.2008.01819.x.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 937-949
-
-
Heuer, H.1
Kopmann, C.2
Binh, C.T.3
Top, E.M.4
Smalla, K.5
-
22
-
-
84863732318
-
IncP-1epsilon plasmids are important vectors of antibiotic resistance genes in agricultural systems: Diversification driven by class 1 integron gene cassettes
-
Heuer H, Binh CT, Jechalke S, Kopmann C, Zimmerling U, Krogerrecklenfort E, Ledger T, Gonzalez B, Top E, Smalla K. 2012. IncP-1epsilon plasmids are important vectors of antibiotic resistance genes in agricultural systems: diversification driven by class 1 integron gene cassettes. Front. Microbiol. 3:2. http://dx.doi.org/10.3389/fmicb.2012.00002.
-
(2012)
Front. Microbiol.
, vol.3
, pp. 2
-
-
Heuer, H.1
Binh, C.T.2
Jechalke, S.3
Kopmann, C.4
Zimmerling, U.5
Krogerrecklenfort, E.6
Ledger, T.7
Gonzalez, B.8
Top, E.9
Smalla, K.10
-
23
-
-
76449117718
-
Characterization of antimicrobial resistance and seasonal prevalence of Escherichia coli O157:H7 recovered from commercial feedlots in Alberta, Canada
-
Aslam M, Stanford K, McAllister TA. 2010. Characterization of antimicrobial resistance and seasonal prevalence of Escherichia coli O157:H7 recovered from commercial feedlots in Alberta, Canada. Lett. Appl. Microbiol. 50:320-326. http://dx.doi.org/10.1111/j.1472-765X.2010.02798.x.
-
(2010)
Lett. Appl. Microbiol.
, vol.50
, pp. 320-326
-
-
Aslam, M.1
Stanford, K.2
McAllister, T.A.3
-
24
-
-
78651398509
-
Veterinary antimicrobials in feedlot manure: Dissipation during composting and effects on composting processes
-
Cessna AJ, Larney FJ, Kuchta SL, Hao X, Entz T, Topp E, McAllister TA. 2011. Veterinary antimicrobials in feedlot manure: dissipation during composting and effects on composting processes. J. Environ. Qual. 40: 188-198. http://dx.doi.org/10.2134/jeq2010.0079.
-
(2011)
J. Environ. Qual.
, vol.40
, pp. 188-198
-
-
Cessna, A.J.1
Larney, F.J.2
Kuchta, S.L.3
Hao, X.4
Entz, T.5
Topp, E.6
McAllister, T.A.7
-
25
-
-
0035320660
-
Occurrence and diversity of tetracycline resistance genes in lagoons and groundwater underlying two swine production facilities
-
Chee-Sanford JC, Aminov RI, Krapac IJ, Garrigues-Jeanjean N, Mackie RI. 2001. Occurrence and diversity of tetracycline resistance genes in lagoons and groundwater underlying two swine production facilities. Appl. Environ. Microbiol. 67:1494-1502. http://dx.doi.org/10.1128/AEM.67.4. 1494-1502.2001.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 1494-1502
-
-
Chee-Sanford, J.C.1
Aminov, R.I.2
Krapac, I.J.3
Garrigues-Jeanjean, N.4
McKie, R.I.5
-
26
-
-
77950664204
-
Phenotypic and genotypic bacterial antimicrobial resistance in liquid pig manure is variously associated with contents of tetracyclines and sulfonamides
-
Hölzel CS, Harms KS, Küchenhoff H, Kunz A, Müller C, Meyer K, Schwaiger K, Bauer J. 2010. Phenotypic and genotypic bacterial antimicrobial resistance in liquid pig manure is variously associated with contents of tetracyclines and sulfonamides. J. Appl. Microbiol. 108: 1642-1656. http://dx.doi.org/10.1111/j.1365-2672.2009.04570.x.
-
(2010)
J. Appl. Microbiol.
, vol.108
, pp. 1642-1656
-
-
Hölzel, C.S.1
Harms, K.S.2
Küchenhoff, H.3
Kunz, A.4
Müller, C.5
Meyer, K.6
Schwaiger, K.7
Bauer, J.8
-
27
-
-
79955025122
-
Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice
-
Goodman AL, Kallstrom G, Faith JJ, Reyes A, Moore A, Dantas G, Gordon JI. 2011. Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice. Proc. Natl. Acad. Sci. U. S. A. 108:6252-6257. http://dx.doi.org/10.1073/pnas.11029 38108.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 6252-6257
-
-
Goodman, A.L.1
Kallstrom, G.2
Faith, J.J.3
Reyes, A.4
Moore, A.5
Dantas, G.6
Gordon, J.I.7
-
28
-
-
79251641527
-
Virulence-associated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach
-
Durso LM, Harhay GP, Bono JL, Smith TP. 2011. Virulence-associated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach. J. Microbiol. Methods 84: 278-282. http://dx.doi.org/10.1016/j.mimet.2010.12.008.
-
(2011)
J. Microbiol. Methods
, vol.84
, pp. 278-282
-
-
Durso, L.M.1
Harhay, G.P.2
Bono, J.L.3
Smith, T.P.4
-
29
-
-
58549083738
-
Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil
-
Allen HK, Moe LA, Rodbumrer J, Gaarder A, Handelsman J. 2009. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil. ISME J. 3:243-251. http://dx.doi.org/10.1038/ismej.2008.86.
-
(2009)
ISME J.
, vol.3
, pp. 243-251
-
-
Allen, H.K.1
Moe, L.A.2
Rodbumrer, J.3
Gaarder, A.4
Handelsman, J.5
-
30
-
-
4344587758
-
Uncultured soil bacteria are a reservoir of new antibiotic resistance genes
-
Riesenfeld CS, Goodman RM, Handelsman J. 2004. Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environ. Microbiol. 6:981-989. http://dx.doi.org/10.1111/j.1462-2920.2004.00664.x.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 981-989
-
-
Riesenfeld, C.S.1
Goodman, R.M.2
Handelsman, J.3
-
31
-
-
77953057819
-
Identification of diverse antimicrobial resistance determinants carried on bacterial, plasmid, or viral metagenomes from an activated sludge microbial assemblage
-
Parsley LC, Consuegra EJ, Kakirde KS, Land AM, Harper WF, Liles MR. 2010. Identification of diverse antimicrobial resistance determinants carried on bacterial, plasmid, or viral metagenomes from an activated sludge microbial assemblage. Appl. Environ. Microbiol. 76:3753-3757. http://dx.doi.org/10.1128/AEM.03080-09.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 3753-3757
-
-
Parsley, L.C.1
Consuegra, E.J.2
Kakirde, K.S.3
Land, A.M.4
Harper, W.F.5
Liles, M.R.6
-
32
-
-
77955043924
-
The human microbiome harbors a diverse reservoir of antibiotic resistance genes
-
Sommer MO, Church GM, Dantas G. 2010. The human microbiome harbors a diverse reservoir of antibiotic resistance genes. Virulence 1:299-303. http://dx.doi.org/10.4161/viru.1.4.12010.
-
(2010)
Virulence
, vol.1
, pp. 299-303
-
-
Sommer, M.O.1
Church, G.M.2
Dantas, G.3
-
34
-
-
84862592219
-
Functional metagenomics reveals previously unrecognized diversity of antibiotic resistance genes in gulls
-
Martiny AC, Martiny JBH, Weihe C, Field A, Ellis JC. 2011. Functional metagenomics reveals previously unrecognized diversity of antibiotic resistance genes in gulls. Front. Microbiol. 2:238. http://dx.doi.org/10.3389 /fmicb.2011.00238.
-
(2011)
Front. Microbiol.
, vol.2
, pp. 238
-
-
Martiny, A.C.1
Martiny, J.B.H.2
Weihe, C.3
Field, A.4
Ellis, J.C.5
-
35
-
-
84855684289
-
Mastitis therapy and antimicrobial susceptibility: A multispecies review with a focus on antibiotic treatment of mastitis in dairy cattle
-
Barlow J. 2011. Mastitis therapy and antimicrobial susceptibility: a multispecies review with a focus on antibiotic treatment of mastitis in dairy cattle. J. Mammary Gland Biol. Neoplasia 16:383-407. http://dx.doi.org/ 10.1007/s10911-011-9235-z.
-
(2011)
J. Mammary Gland Biol. Neoplasia
, vol.16
, pp. 383-407
-
-
Barlow, J.1
-
36
-
-
84880798154
-
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
-
Chin CS, Alexander DH, Marks P, Klammer AA, Drake J, Heiner C, Clum A, Copeland A, Huddleston J, Eichler EE, Turner SW, Korlach J. 2013. Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat. Methods 10:563-569. http://dx.doi.org/10.1 038/nmeth.2474.
-
(2013)
Nat. Methods
, vol.10
, pp. 563-569
-
-
Chin, C.S.1
Alexander, D.H.2
Marks, P.3
Klammer, A.A.4
Drake, J.5
Heiner, C.6
Clum, A.7
Copeland, A.8
Huddleston, J.9
Eichler, E.E.10
Turner, S.W.11
Korlach, J.12
-
37
-
-
77954730922
-
Animal-toanimal variation in fecal microbial diversity among beef cattle
-
Durso LM, Harhay GP, Smith TP, Bono JL, Desantis TZ, Harhay DM, Andersen GL, Keen JE, Laegreid WW, Clawson ML. 2010. Animal-toanimal variation in fecal microbial diversity among beef cattle. Appl. Environ. Microbiol. 76:4858-4862. http://dx.doi.org/10.1128/AEM.00207-10.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4858-4862
-
-
Durso, L.M.1
Harhay, G.P.2
Smith, T.P.3
Bono, J.L.4
Desantis, T.Z.5
Harhay, D.M.6
Andersen, G.L.7
Keen, J.E.8
Laegreid, W.W.9
Clawson, M.L.10
-
38
-
-
0023552975
-
The aacA-aphD gentamycin and kanamycin resistance determinant of Tn4001 from Staphylococcus aureus-expression and nucleotide analysis
-
Rouch DA, Byrne ME, Kong YC, Skurray RA. 1987. The aacA-aphD gentamycin and kanamycin resistance determinant of Tn4001 from Staphylococcus aureus-expression and nucleotide analysis. J. Gen. Microbiol. 133:3039-3052.
-
(1987)
J. Gen. Microbiol.
, vol.133
, pp. 3039-3052
-
-
Rouch, D.A.1
Byrne, M.E.2
Kong, Y.C.3
Skurray, R.A.4
-
39
-
-
0034746174
-
Bifunctional enzyme 6=-N-aminoglycoside acetyltransferase-2==-O-aminoglycoside phosphotransferase in Lactobacillus and Pediococcus isolates of animal origin
-
Tenorio C, Zarazaga M, Martinez C, Torres C. 2001. Bifunctional enzyme 6=-N-aminoglycoside acetyltransferase-2==-O-aminoglycoside phosphotransferase in Lactobacillus and Pediococcus isolates of animal origin. J. Clin. Microbiol. 39:824-825.
-
(2001)
J. Clin. Microbiol.
, vol.39
, pp. 824-825
-
-
Tenorio, C.1
Zarazaga, M.2
Martinez, C.3
Torres, C.4
-
40
-
-
0019326853
-
The structure of beta-lactamases
-
Ambler RP. 1980. The structure of beta-lactamases. Philos. Trans. R. Soc. Lond. B Biol. Sci. 289:321-331. http://dx.doi.org/10.1098/rstb.1980.0049.
-
(1980)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.289
, pp. 321-331
-
-
Ambler, R.P.1
-
41
-
-
0036604099
-
Emergence, spread, and environmental effect of antimicrobial resistance: How use of an antimicrobial anywhere can increase resistance to any antimicrobial anywhere else
-
O'Brien TF. 2002. Emergence, spread, and environmental effect of antimicrobial resistance: how use of an antimicrobial anywhere can increase resistance to any antimicrobial anywhere else. Clin. Infect. Dis. 34(Suppl 3):S78-S84. http://dx.doi.org/10.1086/340244.
-
(2002)
Clin. Infect. Dis.
, vol.34
, Issue.SUPPL. 3
-
-
O'Brien, T.F.1
-
42
-
-
18744368461
-
Gentamicin resistance genes in environmental bacteria: Prevalence and transfer
-
Heuer H, Krögerrecklenfort E, Wellington EM, Egan S, van Elsas JD, van Overbeek L, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, Smalla K. 2002. Gentamicin resistance genes in environmental bacteria: prevalence and transfer. FEMS Microbiol. Ecol. 42:289-302. http://dx.doi.org/10.1111/j.1574-6941.2002.tb01019.x.
-
(2002)
FEMS Microbiol. Ecol.
, vol.42
, pp. 289-302
-
-
Heuer, H.1
Krögerrecklenfort, E.2
Wellington, E.M.3
Egan, S.4
van Elsas, J.D.5
van Overbeek, L.6
Collard, J.M.7
Guillaume, G.8
Karagouni, A.D.9
Nikolakopoulou, T.L.10
Smalla, K.11
-
43
-
-
18744366054
-
Prevalence of streptomycin-resistance genes in bacterial populations in European habitats
-
van Overbeek LS, Wellington EM, Egan S, Smalla K, Heuer H, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, van Elsas JD. 2002. Prevalence of streptomycin-resistance genes in bacterial populations in European habitats. FEMS Microbiol. Ecol. 42:277-288. http:// dx.doi.org/10.1111/j.1574-6941.2002.tb01018.x.
-
(2002)
FEMS Microbiol. Ecol.
, vol.42
, pp. 277-288
-
-
van Overbeek, L.S.1
Wellington, E.M.2
Egan, S.3
Smalla, K.4
Heuer, H.5
Collard, J.M.6
Guillaume, G.7
Karagouni, A.D.8
Nikolakopoulou, T.L.9
van Elsas, J.D.10
-
44
-
-
84872164313
-
Long-term exposure to antibiotics has caused accumulation of resistance determinants in the gut microbiota of honeybees
-
e00377-12
-
Tian B, Fadhil NH, Powell JE, Kwong WK, Moran NA. 2012. Long-term exposure to antibiotics has caused accumulation of resistance determinants in the gut microbiota of honeybees. mBio 3:e00377-12. http:// dx.doi.org/10.1128/mBio.00377-12.
-
(2012)
mBio
, vol.3
-
-
Tian, B.1
Fadhil, N.H.2
Powell, J.E.3
Kwong, W.K.4
Moran, N.A.5
-
45
-
-
78650625418
-
Occurrence and environmental fate of veterinary antibiotics in the terrestrial environment
-
Kim KR, Owens G, Kwon SI, So KH, Lee DB, Ok YS. 2011. Occurrence and environmental fate of veterinary antibiotics in the terrestrial environment. Water Air Soil Pollut. 214:163-174. http://dx.doi.org/10.1007/s112 70-010-0412-2.
-
(2011)
Water Air Soil Pollut.
, vol.214
, pp. 163-174
-
-
Kim, K.R.1
Owens, G.2
Kwon, S.I.3
So, K.H.4
Lee, D.B.5
Ok, Y.S.6
-
46
-
-
77954268851
-
Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins
-
Donato JJ, Moe LA, Converse BJ, Smart KD, Berklein FC, McManus PS, Handelsman J. 2010. Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins. Appl. Environ. Microbiol. 76:4396-4401. http://dx.doi.org/10.112 8/AEM.01763-09.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4396-4401
-
-
Donato, J.J.1
Moe, L.A.2
Converse, B.J.3
Smart, K.D.4
Berklein, F.C.5
McManus, P.S.6
Handelsman, J.7
-
47
-
-
35948933107
-
Short-term effects of amoxicillin on bacterial communities in manured soil
-
Binh CT, Heuer H, Gomes NC, Kotzerke A, Fulle M, Wilke BM, Schloter M, Smalla K. 2007. Short-term effects of amoxicillin on bacterial communities in manured soil. FEMS Microbiol. Ecol. 62:290-302. http:// dx.doi.org/10.1111/j.1574-6941.2007.00393.x.
-
(2007)
FEMS Microbiol. Ecol.
, vol.62
, pp. 290-302
-
-
Binh, C.T.1
Heuer, H.2
Gomes, N.C.3
Kotzerke, A.4
Fulle, M.5
Wilke, B.M.6
Schloter, M.7
Smalla, K.8
-
48
-
-
44249127260
-
Recovery, purification, and cloning of highmolecular-weight DNA from soil microorganisms
-
Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J. 2008. Recovery, purification, and cloning of highmolecular-weight DNA from soil microorganisms. Appl. Environ. Microbiol. 74:3302-3305. http://dx.doi.org/10.1128/AEM.02630-07.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 3302-3305
-
-
Liles, M.R.1
Williamson, L.L.2
Rodbumrer, J.3
Torsvik, V.4
Goodman, R.M.5
Handelsman, J.6
-
49
-
-
0033580277
-
Broad-host-range expression vectors that carry the L-arabinose-inducible Escherichia coli araBAD promoter and the araC regulator
-
Newman JR, Fuqua C. 1999. Broad-host-range expression vectors that carry the L-arabinose-inducible Escherichia coli araBAD promoter and the araC regulator. Gene 227:197-203. http://dx.doi.org/10.1016/S0378-111 9(98)00601-5.
-
(1999)
Gene
, vol.227
, pp. 197-203
-
-
Newman, J.R.1
Fuqua, C.2
-
50
-
-
83955165353
-
Nonlinear electrophoresis for purification of soil DNA for metagenomics
-
Engel K, Pinnell L, Cheng J, Charles TC, Neufeld JD. 2012. Nonlinear electrophoresis for purification of soil DNA for metagenomics. J. Microbiol. Methods 88:35-40. http://dx.doi.org/10.1016/j.mimet.2011.10.007.
-
(2012)
J. Microbiol. Methods
, vol.88
, pp. 35-40
-
-
Engel, K.1
Pinnell, L.2
Cheng, J.3
Charles, T.C.4
Neufeld, J.D.5
-
51
-
-
0034708758
-
A whole-genome assembly of Drosophila
-
Myers EW, Sutton GG, Delcher AL, Dew IM, Fasulo DP, Flanigan MJ, Kravitz SA, Mobarry CM, Reinert KH, Remington KA, Anson EL, Bolanos RA, Chou HH, Jordan CM, Halpern AL, Lonardi S, Beasley EM, Brandon RC, Chen L, Dunn PJ, Lai Z, Liang Y, Nusskern DR, Zhan M, Zhang Q, Zheng X, Rubin GM, Adams MD, Venter JC. 2000. A whole-genome assembly of Drosophila. Science 287:2196-2204. http:// dx.doi.org/10.1126/science.287.5461.2196.
-
(2000)
Science
, vol.287
, pp. 2196-2204
-
-
Myers, E.W.1
Sutton, G.G.2
Delcher, A.L.3
Dew, I.M.4
Fasulo, D.P.5
Flanigan, M.J.6
Kravitz, S.A.7
Mobarry, C.M.8
Reinert, K.H.9
Remington, K.A.10
Anson, E.L.11
Bolanos, R.A.12
Chou, H.H.13
Jordan, C.M.14
Halpern, A.L.15
Lonardi, S.16
Beasley, E.M.17
Brandon, R.C.18
Chen, L.19
Dunn, P.J.20
Lai, Z.21
Liang, Y.22
Nusskern, D.R.23
Zhan, M.24
Zhang, Q.25
Zheng, X.26
Rubin, G.M.27
Adams, M.D.28
Venter, J.C.29
more..
-
52
-
-
36448991500
-
Clustal W and Clustal X version 2
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG. 2007. Clustal W and Clustal X version 2. Bioinformatics 23:2947-2948. http://dx.doi.org/10.1093/bioinformatics /btm404.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
53
-
-
51449108782
-
Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome
-
Qu A, Brulc JM, Wilson MK, Law BF, Theoret JR, Joens LA, Konkel ME, Angly F, Dinsdale EA, Edwards RA, Nelson KE, White BA. 2008. Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome. PLoS One 3:e2945. http://dx.doi.org/10.1371/journal.pone.0002945.
-
(2008)
PLoS One
, vol.3
-
-
Qu, A.1
Brulc, J.M.2
Wilson, M.K.3
Law, B.F.4
Theoret, J.R.5
Joens, L.A.6
Konkel, M.E.7
Angly, F.8
Dinsdale, E.A.9
Edwards, R.A.10
Nelson, K.E.11
White, B.A.12
-
54
-
-
84863098466
-
High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing
-
Ross EM, Moate PJ, Bath CR, Davidson SE, Sawbridge TI, Guthridge KM, Cocks BG, Hayes BJ. 2012. High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing. BMC Genet. 13:53. http://dx.doi.org/10.1286/1471-2156-13-53.
-
(2012)
BMC Genet.
, vol.13
, pp. 53
-
-
Ross, E.M.1
Moate, P.J.2
Bath, C.R.3
Davidson, S.E.4
Sawbridge, T.I.5
Guthridge, K.M.6
Cocks, B.G.7
Hayes, B.J.8
|