메뉴 건너뛰기




Volumn 7, Issue MAR, 2016, Pages

Genetic evidence for O-specific antigen as receptor of Pseudomonas aeruginosa phage K8 and its genomic analysis

Author keywords

Genome annotation; O specific antigen (OSA); Phage receptor; Pseudomonas phage K8; Wzy gene

Indexed keywords

BACTERIOPHAGE RECEPTOR; LIPOPOLYSACCHARIDE; MEMBRANE PROTEIN; O ANTIGEN;

EID: 84964336781     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2016.00252     Document Type: Article
Times cited : (21)

References (65)
  • 2
    • 0344863179 scopus 로고    scopus 로고
    • The complete nucleotide sequence and functional organization of Bacillus subtilis bacteriophage SPP1
    • Alonso, J. C., Luder, G., Stiege, A. C., Chai, S., Weise, F., and Trautner, T. A. (1997). The complete nucleotide sequence and functional organization of Bacillus subtilis bacteriophage SPP1. Gene 204, 201-212. doi: 10.1016/S0378-1119(97)00547-7.
    • (1997) Gene , vol.204 , pp. 201-212
    • Alonso, J.C.1    Luder, G.2    Stiege, A.C.3    Chai, S.4    Weise, F.5    Trautner, T.A.6
  • 3
    • 84998910086 scopus 로고    scopus 로고
    • Complete genome sequence of Pseudomonas aeruginosa Podophage MPK7, which requires type IV Pili for infection
    • Bae, H. W., and Cho, Y. H. (2013). Complete genome sequence of Pseudomonas aeruginosa Podophage MPK7, which requires type IV Pili for infection. Genome Announc 1:e744. doi: 10.1128/genomeA.00744-13.
    • (2013) Genome Announc , vol.1
    • Bae, H.W.1    Cho, Y.H.2
  • 4
    • 0040496902 scopus 로고    scopus 로고
    • Functional analysis of genes responsible for the synthesis of the B-band O antigen of Pseudomonas aeruginosa serotype O6 lipopolysaccharide
    • Belanger, M., Burrows, L. L., and Lam, J. S. (1999). Functional analysis of genes responsible for the synthesis of the B-band O antigen of Pseudomonas aeruginosa serotype O6 lipopolysaccharide. Microbiology 145(Pt 12), 3505-3521. doi: 10.1099/00221287-145-12-3505.
    • (1999) Microbiology , vol.145 , pp. 3505-3521
    • Belanger, M.1    Burrows, L.L.2    Lam, J.S.3
  • 5
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: a flexible trimmer for Illumina sequence data
    • Bolger, A. M., Lohse, M., and Usadel, B. (2014). Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30, 2114-2120. doi: 10.1093/bioinformatics/btu170.
    • (2014) Bioinformatics , vol.30 , pp. 2114-2120
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 6
    • 0016123626 scopus 로고
    • The production of extracellular lipids by Pseudomonas aeruginosa NCTC 2000 in stationary liquid media containing macrogols
    • Bradley, T. J., and Khan, N. H. (1974). The production of extracellular lipids by Pseudomonas aeruginosa NCTC 2000 in stationary liquid media containing macrogols. J. Pharm. Pharmacol. 26, 900-902. doi: 10.1111/j.2042-7158.1974.tb09201.x.
    • (1974) J. Pharm. Pharmacol , vol.26 , pp. 900-902
    • Bradley, T.J.1    Khan, N.H.2
  • 7
    • 67651219385 scopus 로고    scopus 로고
    • The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs
    • Brencic, A., Mcfarland, K. A., Mcmanus, H. R., Castang, S., Mogno, I., Dove, S. L., et al. (2009). The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs. Mol. Microbiol. 73, 434-445. doi: 10.1111/j.1365-2958.2009.06782.x.
    • (2009) Mol. Microbiol , vol.73 , pp. 434-445
    • Brencic, A.1    Mcfarland, K.A.2    Mcmanus, H.R.3    Castang, S.4    Mogno, I.5    Dove, S.L.6
  • 8
    • 58049208278 scopus 로고    scopus 로고
    • DNAPlotter: circular and linear interactive genome visualization
    • Carver, T., Thomson, N., Bleasby, A., Berriman, M., and Parkhill, J. (2009). DNAPlotter: circular and linear interactive genome visualization. Bioinformatics 25, 119-120. doi: 10.1093/bioinformatics/btn578.
    • (2009) Bioinformatics , vol.25 , pp. 119-120
    • Carver, T.1    Thomson, N.2    Bleasby, A.3    Berriman, M.4    Parkhill, J.5
  • 9
    • 77954706988 scopus 로고    scopus 로고
    • Bacteriophages of Pseudomonas
    • Ceyssens, P. J., and Lavigne, R. (2010). Bacteriophages of Pseudomonas. Future Microbiol 5, 1041-1055. doi: 10.2217/fmb.10.66.
    • (2010) Future Microbiol , vol.5 , pp. 1041-1055
    • Ceyssens, P.J.1    Lavigne, R.2
  • 10
    • 33749349217 scopus 로고    scopus 로고
    • Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup
    • Ceyssens, P. J., Lavigne, R., Mattheus, W., Chibeu, A., Hertveldt, K., Mast, J., et al. (2006). Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup. J. Bacteriol. 188, 6924-6931. doi: 10.1128/JB.00831-06.
    • (2006) J. Bacteriol , vol.188 , pp. 6924-6931
    • Ceyssens, P.J.1    Lavigne, R.2    Mattheus, W.3    Chibeu, A.4    Hertveldt, K.5    Mast, J.6
  • 11
    • 84878321621 scopus 로고    scopus 로고
    • Phage cocktails and the future of phage therapy
    • Chan, B. K., Abedon, S. T., and Loc-Carrillo, C. (2013). Phage cocktails and the future of phage therapy. Future Microbiol. 8, 769-783. doi: 10.2217/fmb.13.47.
    • (2013) Future Microbiol , vol.8 , pp. 769-783
    • Chan, B.K.1    Abedon, S.T.2    Loc-Carrillo, C.3
  • 12
    • 0034705422 scopus 로고    scopus 로고
    • Expression, purification, and biochemical characterization of WbpP, a new UDP-GlcNAc C4 epimerase from Pseudomonas aeruginosa serotype O6
    • Creuzenet, C., Belanger, M., Wakarchuk, W. W., and Lam, J. S. (2000). Expression, purification, and biochemical characterization of WbpP, a new UDP-GlcNAc C4 epimerase from Pseudomonas aeruginosa serotype O6. J. Biol. Chem. 275, 19060-19067. doi: 10.1074/jbc.M001171200.
    • (2000) J. Biol. Chem , vol.275 , pp. 19060-19067
    • Creuzenet, C.1    Belanger, M.2    Wakarchuk, W.W.3    Lam, J.S.4
  • 13
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: multiple alignment of conserved genomic sequence with rearrangements
    • Darling, A. C., Mau, B., Blattner, F. R., and Perna, N. T. (2004). Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14, 1394-1403. doi: 10.1101/gr.2289704.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4
  • 14
    • 0036271967 scopus 로고    scopus 로고
    • Microtiter plate assay for assessment of Listeria monocytogenes biofilm formation
    • Djordjevic, D., Wiedmann, M., and Mclandsborough, L. A. (2002). Microtiter plate assay for assessment of Listeria monocytogenes biofilm formation. Appl. Environ. Microbiol. 68, 2950-2958. doi: 10.1128/AEM.68.6.2950-2958.2002.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 2950-2958
    • Djordjevic, D.1    Wiedmann, M.2    Mclandsborough, L.A.3
  • 15
    • 0027379284 scopus 로고
    • An overview of nosocomial infections, including the role of the microbiology laboratory
    • Emori, T. G., and Gaynes, R. P. (1993). An overview of nosocomial infections, including the role of the microbiology laboratory. Clin. Microbiol. Rev. 6, 428-442.
    • (1993) Clin. Microbiol. Rev , vol.6 , pp. 428-442
    • Emori, T.G.1    Gaynes, R.P.2
  • 16
    • 84876548481 scopus 로고    scopus 로고
    • The susceptibility of Pseudomonas aeruginosa strains from cystic fibrosis patients to bacteriophages
    • Essoh, C., Blouin, Y., Loukou, G., Cablanmian, A., Lathro, S., Kutter, E., et al. (2013). The susceptibility of Pseudomonas aeruginosa strains from cystic fibrosis patients to bacteriophages. PLoS ONE 8:e60575. doi: 10.1371/journal.pone.0060575.
    • (2013) PLoS ONE , vol.8
    • Essoh, C.1    Blouin, Y.2    Loukou, G.3    Cablanmian, A.4    Lathro, S.5    Kutter, E.6
  • 17
    • 84938362884 scopus 로고    scopus 로고
    • Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Cote d'Ivoire
    • Essoh, C., Latino, L., Midoux, C., Blouin, Y., Loukou, G., Nguetta, S. P., et al. (2015). Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Cote d'Ivoire. PLoS ONE 10:e0130548. doi: 10.1371/journal.pone.0130548.
    • (2015) PLoS ONE , vol.10
    • Essoh, C.1    Latino, L.2    Midoux, C.3    Blouin, Y.4    Loukou, G.5    Nguetta, S.P.6
  • 19
    • 0025245593 scopus 로고
    • Modification of the silver staining technique to detect lipopolysaccharide in polyacrylamide gels
    • Fomsgaard, A., Freudenberg, M. A., and Galanos, C. (1990). Modification of the silver staining technique to detect lipopolysaccharide in polyacrylamide gels. J. Clin. Microbiol. 28, 2627-2631.
    • (1990) J. Clin. Microbiol , vol.28 , pp. 2627-2631
    • Fomsgaard, A.1    Freudenberg, M.A.2    Galanos, C.3
  • 20
    • 79955820125 scopus 로고    scopus 로고
    • Sequencing and characterization of Pseudomonas aeruginosa phage JG004
    • Garbe, J., Bunk, B., Rohde, M., and Schobert, M. (2011). Sequencing and characterization of Pseudomonas aeruginosa phage JG004. BMC Microbiol. 11:102. doi: 10.1186/1471-2180-11-102.
    • (2011) BMC Microbiol , vol.11 , pp. 102
    • Garbe, J.1    Bunk, B.2    Rohde, M.3    Schobert, M.4
  • 21
    • 84922193651 scopus 로고    scopus 로고
    • The search for therapeutic bacteriophages uncovers one new subfamily and two new genera of Pseudomonas-infecting Myoviridae
    • Henry, M., Bobay, L. M., Chevallereau, A., Saussereau, E., Ceyssens, P. J., and Debarbieux, L. (2015). The search for therapeutic bacteriophages uncovers one new subfamily and two new genera of Pseudomonas-infecting Myoviridae. PLoS ONE 10:e0117163. doi: 10.1371/journal.pone.0117163.
    • (2015) PLoS ONE , vol.10
    • Henry, M.1    Bobay, L.M.2    Chevallereau, A.3    Saussereau, E.4    Ceyssens, P.J.5    Debarbieux, L.6
  • 22
    • 31944445169 scopus 로고    scopus 로고
    • Identification and specificity of pilus adsorption proteins of filamentous bacteriophages infecting Pseudomonas aeruginosa
    • Holland, S. J., Sanz, C., and Perham, R. N. (2006). Identification and specificity of pilus adsorption proteins of filamentous bacteriophages infecting Pseudomonas aeruginosa. Virology 345, 540-548. doi: 10.1016/j.virol.2005.10.020.
    • (2006) Virology , vol.345 , pp. 540-548
    • Holland, S.J.1    Sanz, C.2    Perham, R.N.3
  • 23
    • 84909952305 scopus 로고    scopus 로고
    • Synthesis of bacterial polysaccharides via the Wzx/Wzy-dependent pathway
    • Islam, S. T., and Lam, J. S. (2014). Synthesis of bacterial polysaccharides via the Wzx/Wzy-dependent pathway. Can. J. Microbiol. 60, 697-716. doi: 10.1139/cjm-2014-0595.
    • (2014) Can. J. Microbiol , vol.60 , pp. 697-716
    • Islam, S.T.1    Lam, J.S.2
  • 24
    • 84902275303 scopus 로고    scopus 로고
    • Multidrug-resistant and extensively drug-resistant Gram-negative pathogens: current and emerging therapeutic approaches
    • Karaiskos, I., and Giamarellou, H. (2014). Multidrug-resistant and extensively drug-resistant Gram-negative pathogens: current and emerging therapeutic approaches. Expert Opin. Pharmacother. 15, 1351-1370. doi: 10.1517/14656566.2014.914172.
    • (2014) Expert Opin. Pharmacother , vol.15 , pp. 1351-1370
    • Karaiskos, I.1    Giamarellou, H.2
  • 25
    • 84866155898 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa bacteriophage PA1O requires type IV pili for infection and shows broad bactericidal and biofilm removal activities
    • Kim, S., Rahman, M., Seol, S. Y., Yoon, S. S., and Kim, J. (2012). Pseudomonas aeruginosa bacteriophage PA1O requires type IV pili for infection and shows broad bactericidal and biofilm removal activities. Appl. Environ. Microbiol. 78, 6380-6385. doi: 10.1128/AEM.00648-12.
    • (2012) Appl. Environ. Microbiol , vol.78 , pp. 6380-6385
    • Kim, S.1    Rahman, M.2    Seol, S.Y.3    Yoon, S.S.4    Kim, J.5
  • 26
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
    • Krogh, A., Larsson, B., Von Heijne, G., and Sonnhammer, E. L. (2001). Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305, 567-580. doi: 10.1006/jmbi.2000.4315.
    • (2001) J. Mol. Biol , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Von Heijne, G.3    Sonnhammer, E.L.4
  • 28
    • 0020560816 scopus 로고
    • O-antigen conversion in Pseudomonas aeruginosa PAO1 by bacteriophage D3
    • Kuzio, J., and Kropinski, A. M. (1983). O-antigen conversion in Pseudomonas aeruginosa PAO1 by bacteriophage D3. J. Bacteriol. 155, 203-212.
    • (1983) J. Bacteriol , vol.155 , pp. 203-212
    • Kuzio, J.1    Kropinski, A.M.2
  • 29
    • 31344473952 scopus 로고    scopus 로고
    • Comparative genomic analysis of 18 Pseudomonas aeruginosa bacteriophages
    • Kwan, T., Liu, J., Dubow, M., Gros, P., and Pelletier, J. (2006). Comparative genomic analysis of 18 Pseudomonas aeruginosa bacteriophages. J. Bacteriol. 188, 1184-1187. doi: 10.1128/JB.188.3.1184-1187.2006.
    • (2006) J. Bacteriol , vol.188 , pp. 1184-1187
    • Kwan, T.1    Liu, J.2    Dubow, M.3    Gros, P.4    Pelletier, J.5
  • 30
    • 84865173458 scopus 로고    scopus 로고
    • Genetic and functional diversity of Pseudomonas aeruginosa Lipopolysaccharide
    • Lam, J. S., Taylor, V. L., Islam, S. T., Hao, Y., and Kocincova, D. (2011). Genetic and functional diversity of Pseudomonas aeruginosa Lipopolysaccharide. Front. Microbiol. 2:118. doi: 10.3389/fmicb.2011.00118.
    • (2011) Front. Microbiol , vol.2 , pp. 118
    • Lam, J.S.1    Taylor, V.L.2    Islam, S.T.3    Hao, Y.4    Kocincova, D.5
  • 31
    • 84899426269 scopus 로고    scopus 로고
    • A novel Pseudomonas aeruginosa bacteriophage, Ab31, a chimera formed from temperate phage PAJU2 and P. putida lytic phage AF: characteristics and mechanism of bacterial resistance
    • Latino, L., Essoh, C., Blouin, Y., Vu Thien, H., and Pourcel, C. (2014). A novel Pseudomonas aeruginosa bacteriophage, Ab31, a chimera formed from temperate phage PAJU2 and P. putida lytic phage AF: characteristics and mechanism of bacterial resistance. PLoS ONE 9:e93777. doi: 10.1371/journal.pone.0093777.
    • (2014) PLoS ONE , vol.9
    • Latino, L.1    Essoh, C.2    Blouin, Y.3    Vu Thien, H.4    Pourcel, C.5
  • 32
    • 78549296776 scopus 로고    scopus 로고
    • Classification of 17 newly isolated virulent bacteriophages of Pseudomonas aeruginosa
    • Li, L., Yang, H., Lin, S., and Jia, S. (2010). Classification of 17 newly isolated virulent bacteriophages of Pseudomonas aeruginosa. Can. J. Microbiol. 56, 925-933. doi: 10.1139/w10-075.
    • (2010) Can. J. Microbiol , vol.56 , pp. 925-933
    • Li, L.1    Yang, H.2    Lin, S.3    Jia, S.4
  • 33
    • 84908274657 scopus 로고    scopus 로고
    • Scrutinizing virus genome termini by high-throughput sequencing
    • Li, S., Fan, H., An, X., Jiang, H., Chen, Y., and Tong, Y. (2014). Scrutinizing virus genome termini by high-throughput sequencing. PLoS ONE 9:e85806. doi: 10.1371/journal.pone.0085806.
    • (2014) PLoS ONE , vol.9
    • Li, S.1    Fan, H.2    An, X.3    Jiang, H.4    Chen, Y.5    Tong, Y.6
  • 34
    • 70449124604 scopus 로고    scopus 로고
    • Antibacterial-resistant Pseudomonas aeruginosa: clinical impact and complex regulation of chromosomally encoded resistance mechanisms
    • Lister, P. D., Wolter, D. J., and Hanson, N. D. (2009). Antibacterial-resistant Pseudomonas aeruginosa: clinical impact and complex regulation of chromosomally encoded resistance mechanisms. Clin. Microbiol. Rev. 22, 582-610. doi: 10.1128/CMR.00040-09.
    • (2009) Clin. Microbiol. Rev , vol.22 , pp. 582-610
    • Lister, P.D.1    Wolter, D.J.2    Hanson, N.D.3
  • 35
    • 84877662657 scopus 로고    scopus 로고
    • Genomic and proteomic analyses of the terminally redundant genome of the Pseudomonas aeruginosa phage PaP1: establishment of genus PaP1-like phages
    • Lu, S., Le, S., Tan, Y., Zhu, J., Li, M., Rao, X., et al. (2013). Genomic and proteomic analyses of the terminally redundant genome of the Pseudomonas aeruginosa phage PaP1: establishment of genus PaP1-like phages. PLoS ONE 8:e62933. doi: 10.1371/journal.pone.0062933.
    • (2013) PLoS ONE , vol.8
    • Lu, S.1    Le, S.2    Tan, Y.3    Zhu, J.4    Li, M.5    Rao, X.6
  • 36
    • 0022383671 scopus 로고
    • Nucleotide sequence of the genome of Pf3, an IncP-1 plasmid-specific filamentous bacteriophage of Pseudomonas aeruginosa
    • Luiten, R. G., Putterman, D. G., Schoenmakers, J. G., Konings, R. N., and Day, L. A. (1985). Nucleotide sequence of the genome of Pf3, an IncP-1 plasmid-specific filamentous bacteriophage of Pseudomonas aeruginosa. J. Virol. 56, 268-276.
    • (1985) J. Virol , vol.56 , pp. 268-276
    • Luiten, R.G.1    Putterman, D.G.2    Schoenmakers, J.G.3    Konings, R.N.4    Day, L.A.5
  • 38
    • 84895760980 scopus 로고    scopus 로고
    • Influence of O polysaccharides on biofilm development and outer membrane vesicle biogenesis in Pseudomonas aeruginosa PAO1
    • Murphy, K., Park, A. J., Hao, Y., Brewer, D., Lam, J. S., and Khursigara, C. M. (2014). Influence of O polysaccharides on biofilm development and outer membrane vesicle biogenesis in Pseudomonas aeruginosa PAO1. J. Bacteriol. 196, 1306-1317. doi: 10.1128/JB.01463-13.
    • (2014) J. Bacteriol , vol.196 , pp. 1306-1317
    • Murphy, K.1    Park, A.J.2    Hao, Y.3    Brewer, D.4    Lam, J.S.5    Khursigara, C.M.6
  • 39
    • 35348860808 scopus 로고    scopus 로고
    • A new method for assessing the effect of replication on DNA base composition asymmetry
    • Necsulea, A., and Lobry, J. R. (2007). A new method for assessing the effect of replication on DNA base composition asymmetry. Mol. Biol. Evol. 24, 2169-2179. doi: 10.1093/molbev/msm148.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 2169-2179
    • Necsulea, A.1    Lobry, J.R.2
  • 40
    • 0026502111 scopus 로고
    • Components of the protein-excretion apparatus of Pseudomonas aeruginosa are processed by the type IV prepilin peptidase
    • Nunn, D. N., and Lory, S. (1992). Components of the protein-excretion apparatus of Pseudomonas aeruginosa are processed by the type IV prepilin peptidase. Proc. Natl. Acad. Sci. U.S.A. 89, 47-51. doi: 10.1073/pnas.89.1.47.
    • (1992) Proc. Natl. Acad. Sci. U.S.A , vol.89 , pp. 47-51
    • Nunn, D.N.1    Lory, S.2
  • 41
    • 0028852550 scopus 로고
    • Nucleotide sequence of a single-stranded RNA phage from Pseudomonas aeruginosa: kinship to coliphages and conservation of regulatory RNA structures
    • Olsthoorn, R. C., Garde, G., Dayhuff, T., Atkins, J. F., and Van Duin, J. (1995). Nucleotide sequence of a single-stranded RNA phage from Pseudomonas aeruginosa: kinship to coliphages and conservation of regulatory RNA structures. Virology 206, 611-625. doi: 10.1016/S0042-6822(95)80078-6.
    • (1995) Virology , vol.206 , pp. 611-625
    • Olsthoorn, R.C.1    Garde, G.2    Dayhuff, T.3    Atkins, J.F.4    Van Duin, J.5
  • 42
    • 0035104011 scopus 로고    scopus 로고
    • Complete genomic sequence of the lytic bacteriophage phiYeO3-12 of Yersinia enterocolitica serotype O:3
    • Pajunen, M. I., Kiljunen, S. J., Soderholm, M. E., and Skurnik, M. (2001). Complete genomic sequence of the lytic bacteriophage phiYeO3-12 of Yersinia enterocolitica serotype O:3. J. Bacteriol. 183, 1928-1937. doi: 10.1128/JB.183.6.1928-1937.2001.
    • (2001) J. Bacteriol , vol.183 , pp. 1928-1937
    • Pajunen, M.I.1    Kiljunen, S.J.2    Soderholm, M.E.3    Skurnik, M.4
  • 43
    • 0020806429 scopus 로고
    • Studies on the Pseudomonas aeruginosa PAO1 bacteriophage receptors
    • Patel, I. R., and Rao, K. K. (1983). Studies on the Pseudomonas aeruginosa PAO1 bacteriophage receptors. Arch. Microbiol. 135, 155-157. doi: 10.1007/BF00408026.
    • (1983) Arch. Microbiol , vol.135 , pp. 155-157
    • Patel, I.R.1    Rao, K.K.2
  • 44
    • 0026528263 scopus 로고
    • Common antigen lipopolysaccharide from Pseudomonas aeruginosa AK1401 as a receptor for bacteriophage A7
    • Rivera, M., Chivers, T. R., Lam, J. S., and Mcgroarty, E. J. (1992). Common antigen lipopolysaccharide from Pseudomonas aeruginosa AK1401 as a receptor for bacteriophage A7. J. Bacteriol. 174, 2407-2411.
    • (1992) J. Bacteriol , vol.174 , pp. 2407-2411
    • Rivera, M.1    Chivers, T.R.2    Lam, J.S.3    Mcgroarty, E.J.4
  • 45
    • 0032831499 scopus 로고    scopus 로고
    • Genetics of O-antigen biosynthesis in Pseudomonas aeruginosa
    • Rocchetta, H. L., Burrows, L. L., and Lam, J. S. (1999). Genetics of O-antigen biosynthesis in Pseudomonas aeruginosa. Microbiol. Mol. Biol. Rev. 63, 523-553.
    • (1999) Microbiol. Mol. Biol. Rev , vol.63 , pp. 523-553
    • Rocchetta, H.L.1    Burrows, L.L.2    Lam, J.S.3
  • 46
    • 0025373755 scopus 로고
    • Pseudomonas aeruginosa transposable bacteriophages D3112 and B3 require pili and surface growth for adsorption
    • Roncero, C., Darzins, A., and Casadaban, M. J. (1990). Pseudomonas aeruginosa transposable bacteriophages D3112 and B3 require pili and surface growth for adsorption. J. Bacteriol. 172, 1899-1904.
    • (1990) J. Bacteriol , vol.172 , pp. 1899-1904
    • Roncero, C.1    Darzins, A.2    Casadaban, M.J.3
  • 47
    • 84922438738 scopus 로고    scopus 로고
    • A multivariate approach to correlate bacterial surface properties to biofilm formation by lipopolysaccharide mutants of Pseudomonas aeruginosa
    • Ruhal, R., Antti, H., Rzhepishevska, O., Boulanger, N., Barbero, D. R., Wai, S. N., et al. (2015). A multivariate approach to correlate bacterial surface properties to biofilm formation by lipopolysaccharide mutants of Pseudomonas aeruginosa. Colloids Surf B Biointerf. 127, 182-191. doi: 10.1016/j.colsurfb.2015.01.030.
    • (2015) Colloids Surf B Biointerf , vol.127 , pp. 182-191
    • Ruhal, R.1    Antti, H.2    Rzhepishevska, O.3    Boulanger, N.4    Barbero, D.R.5    Wai, S.N.6
  • 48
    • 33748507575 scopus 로고    scopus 로고
    • Complete genome sequence of the broad host range single-stranded RNA phage PRR1 places it in the Levivirus genus with characteristics shared with Alloleviviruses
    • Ruokoranta, T. M., Grahn, A. M., Ravantti, J. J., Poranen, M. M., and Bamford, D. H. (2006). Complete genome sequence of the broad host range single-stranded RNA phage PRR1 places it in the Levivirus genus with characteristics shared with Alloleviviruses. J. Virol. 80, 9326-9330. doi: 10.1128/JVI.01005-06.
    • (2006) J. Virol , vol.80 , pp. 9326-9330
    • Ruokoranta, T.M.1    Grahn, A.M.2    Ravantti, J.J.3    Poranen, M.M.4    Bamford, D.H.5
  • 49
    • 23144460836 scopus 로고    scopus 로고
    • The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs
    • Schattner, P., Brooks, A. N., and Lowe, T. M. (2005). The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33, W686-W689. doi: 10.1093/nar/gki366.
    • (2005) Nucleic Acids Res , vol.33 , pp. W686-W689
    • Schattner, P.1    Brooks, A.N.2    Lowe, T.M.3
  • 50
    • 0026011339 scopus 로고
    • Escherichia-Pseudomonas shuttle vectors derived from pUC18/19
    • Schweizer, H. P. (1991). Escherichia-Pseudomonas shuttle vectors derived from pUC18/19. Gene 97, 109-121. doi: 10.1016/0378-1119(91)90016-5.
    • (1991) Gene , vol.97 , pp. 109-121
    • Schweizer, H.P.1
  • 51
    • 84864110943 scopus 로고    scopus 로고
    • High diversity and novel species of Pseudomonas aeruginosa bacteriophages
    • Sepulveda-Robles, O., Kameyama, L., and Guarneros, G. (2012). High diversity and novel species of Pseudomonas aeruginosa bacteriophages. Appl. Environ. Microbiol. 78, 4510-4515. doi: 10.1128/AEM.00065-12.
    • (2012) Appl. Environ. Microbiol , vol.78 , pp. 4510-4515
    • Sepulveda-Robles, O.1    Kameyama, L.2    Guarneros, G.3
  • 52
    • 49149119258 scopus 로고    scopus 로고
    • Phages across the biosphere: contrasts of viruses in soil and aquatic environments
    • Srinivasiah, S., Bhavsar, J., Thapar, K., Liles, M., Schoenfeld, T., and Wommack, K. E. (2008). Phages across the biosphere: contrasts of viruses in soil and aquatic environments. Res. Microbiol. 159, 349-357. doi: 10.1016/j.resmic.2008.04.010.
    • (2008) Res. Microbiol , vol.159 , pp. 349-357
    • Srinivasiah, S.1    Bhavsar, J.2    Thapar, K.3    Liles, M.4    Schoenfeld, T.5    Wommack, K.E.6
  • 53
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739. doi: 10.1093/molbev/msr121.
    • (2011) Mol. Biol. Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 54
    • 33846208695 scopus 로고    scopus 로고
    • Whole genome sequencing of a novel temperate bacteriophage of P. aeruginosa: evidence of tRNA gene mediating integration of the phage genome into the host bacterial chromosome
    • Tan, Y., Zhang, K., Rao, X., Jin, X., Huang, J., Zhu, J., et al. (2007). Whole genome sequencing of a novel temperate bacteriophage of P. aeruginosa: evidence of tRNA gene mediating integration of the phage genome into the host bacterial chromosome. Cell Microbiol. 9, 479-491. doi: 10.1111/j.1462-5822.2006.00804.x.
    • (2007) Cell Microbiol , vol.9 , pp. 479-491
    • Tan, Y.1    Zhang, K.2    Rao, X.3    Jin, X.4    Huang, J.5    Zhu, J.6
  • 55
    • 0022573962 scopus 로고
    • Isolation and characterization of a lipopolysaccharide-specific bacteriophage of Pseudomonas aeruginosa
    • Temple, G. S., Ayling, P. D., and Wilkinson, S. G. (1986). Isolation and characterization of a lipopolysaccharide-specific bacteriophage of Pseudomonas aeruginosa. Microbios 45, 81-91.
    • (1986) Microbios , vol.45 , pp. 81-91
    • Temple, G.S.1    Ayling, P.D.2    Wilkinson, S.G.3
  • 56
    • 0033029003 scopus 로고    scopus 로고
    • The Clinically Isolated FIZ15 bacteriophage causes lysogenic conversion in Pseudomonas aeruginosa PAO1
    • Vaca-Pacheco, S., Paniagua-Contreras, G. L., García-González, O., and De La Garza, M. (1999). The Clinically Isolated FIZ15 bacteriophage causes lysogenic conversion in Pseudomonas aeruginosa PAO1. Curr. Microbiol. 38, 239-243. doi: 10.1007/PL00006794.
    • (1999) Curr. Microbiol , vol.38 , pp. 239-243
    • Vaca-Pacheco, S.1    Paniagua-Contreras, G.L.2    García-González, O.3    De La Garza, M.4
  • 57
    • 78650769725 scopus 로고    scopus 로고
    • Ssg, a putative glycosyltransferase, functions in lipo-and exopolysaccharide biosynthesis and cell surface-related properties in Pseudomonas alkylphenolia
    • Veeranagouda, Y., Lee, K., Cho, A. R., Cho, K., Anderson, E. M., and Lam, J. S. (2011). Ssg, a putative glycosyltransferase, functions in lipo-and exopolysaccharide biosynthesis and cell surface-related properties in Pseudomonas alkylphenolia. FEMS Microbiol. Lett. 315, 38-45. doi: 10.1111/j.1574-6968.2010.02172.x.
    • (2011) FEMS Microbiol. Lett , vol.315 , pp. 38-45
    • Veeranagouda, Y.1    Lee, K.2    Cho, A.R.3    Cho, K.4    Anderson, E.M.5    Lam, J.S.6
  • 58
    • 0029836110 scopus 로고    scopus 로고
    • Large-scale isolation of candidate virulence genes of Pseudomonas aeruginosa by in vivo selection
    • Wang, J., Mushegian, A., Lory, S., and Jin, S. (1996). Large-scale isolation of candidate virulence genes of Pseudomonas aeruginosa by in vivo selection. Proc. Natl. Acad. Sci. U.S.A. 93, 10434-10439. doi: 10.1073/pnas.93.19.10434.
    • (1996) Proc. Natl. Acad. Sci. U.S.A , vol.93 , pp. 10434-10439
    • Wang, J.1    Mushegian, A.2    Lory, S.3    Jin, S.4
  • 59
    • 0002447206 scopus 로고
    • "Bacterial lipopolysaccharides. Extraction with phenol-water and further applications of the procedure, "
    • eds R. Whistler and M. Wolfan (New York, NY: Academic press)
    • Westphal, O., and Jann, K. (1965). "Bacterial lipopolysaccharides. Extraction with phenol-water and further applications of the procedure, " in Methods in Carbohydrate Chemistry, eds R. Whistler and M. Wolfan (New York, NY: Academic press).
    • (1965) Methods in Carbohydrate Chemistry
    • Westphal, O.1    Jann, K.2
  • 61
    • 77951568204 scopus 로고    scopus 로고
    • Isolation and characterization of a virulent bacteriophage AB1 of Acinetobacter baumannii
    • Yang, H., Liang, L., Lin, S., and Jia, S. (2010). Isolation and characterization of a virulent bacteriophage AB1 of Acinetobacter baumannii. BMC Microbiol. 10:131. doi: 10.1186/1471-2180-10-131.
    • (2010) BMC Microbiol , vol.10 , pp. 131
    • Yang, H.1    Liang, L.2    Lin, S.3    Jia, S.4
  • 62
    • 0028133193 scopus 로고
    • Identification of the lipopolysaccharide core region as the receptor site for a cytotoxin-converting phage, phi CTX, of Pseudomonas aeruginosa
    • Yokota, S., Hayashi, T., and Matsumoto, H. (1994). Identification of the lipopolysaccharide core region as the receptor site for a cytotoxin-converting phage, phi CTX, of Pseudomonas aeruginosa. J. Bacteriol. 176, 5262-5269.
    • (1994) J. Bacteriol , vol.176 , pp. 5262-5269
    • Yokota, S.1    Hayashi, T.2    Matsumoto, H.3
  • 63
    • 84997693869 scopus 로고    scopus 로고
    • Complete genome sequence of Bacillus subtilis phage (varphi)105
    • Zeigler, D. R. (2013). Complete genome sequence of Bacillus subtilis phage (varphi)105. Genome Announc. 1. doi: 10.1128/genomeA.00641-13.
    • (2013) Genome Announc , pp. 1
    • Zeigler, D.R.1
  • 64
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D. R., and Birney, E. (2008). Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18, 821-829. doi: 10.1101/gr.074492.107.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 65
    • 0034721759 scopus 로고    scopus 로고
    • WbpO, a UDP-N-acetyl-D-galactosamine dehydrogenase from Pseudomonas aeruginosa serotype O6
    • Zhao, X., Creuzenet, C., Belanger, M., Egbosimba, E., Li, J., and Lam, J. S. (2000). WbpO, a UDP-N-acetyl-D-galactosamine dehydrogenase from Pseudomonas aeruginosa serotype O6. J. Biol. Chem. 275, 33252-33259. doi: 10.1074/jbc.M004191200.
    • (2000) J. Biol. Chem , vol.275 , pp. 33252-33259
    • Zhao, X.1    Creuzenet, C.2    Belanger, M.3    Egbosimba, E.4    Li, J.5    Lam, J.S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.