메뉴 건너뛰기




Volumn 29, Issue , 2015, Pages 135-141

Autonomous production of 1,4-butanediol via a de novo biosynthesis pathway in engineered Escherichia coli

Author keywords

1,4 butanediol; D xylose; Eshcherichia coli; Metabolic engineering; Synthetic biology

Indexed keywords

BIOCHEMISTRY; BIOSYNTHESIS; CARBON; ESCHERICHIA COLI; METABOLISM; MOBILE SECURITY; PRODUCTION CONTROL; XYLOSE;

EID: 84964240931     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2015.03.009     Document Type: Article
Times cited : (109)

References (49)
  • 1
    • 77957329119 scopus 로고    scopus 로고
    • Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli
    • Ajikumar P.K., et al. Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli. Science 2010, 330:70-74.
    • (2010) Science , vol.330 , pp. 70-74
    • Ajikumar, P.K.1
  • 2
    • 38049001166 scopus 로고    scopus 로고
    • Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
    • Atsumi S., Hanai T., Liao J.C. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 2008, 451:86-89.
    • (2008) Nature , vol.451 , pp. 86-89
    • Atsumi, S.1    Hanai, T.2    Liao, J.C.3
  • 3
    • 84872163712 scopus 로고    scopus 로고
    • Engineering of synthetic intercellular communication systems
    • Bacchus W., Fussenegger M. Engineering of synthetic intercellular communication systems. Metab. Eng. 2013, 16:33-41.
    • (2013) Metab. Eng. , vol.16 , pp. 33-41
    • Bacchus, W.1    Fussenegger, M.2
  • 4
    • 84878981373 scopus 로고    scopus 로고
    • Quorum-sensing autoinducers resuscitate dormant Vibrio cholerae in environmental water samples
    • Bari S.M., et al. Quorum-sensing autoinducers resuscitate dormant Vibrio cholerae in environmental water samples. Proc. Natl. Acad. Sci. USA 2013, 110:9926-9931.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 9926-9931
    • Bari, S.M.1
  • 5
    • 84865777627 scopus 로고    scopus 로고
    • Cytosolic re-localization and optimization of valine synthesis and catabolism enables inseased isobutanol production with the yeast Saccharomyces cerevisiae
    • Brat D., Weber C., Lorenzen W., Bode H.B., Boles E. Cytosolic re-localization and optimization of valine synthesis and catabolism enables inseased isobutanol production with the yeast Saccharomyces cerevisiae. Biotechnol. Biofuels 2012, 5:65.
    • (2012) Biotechnol. Biofuels , vol.5 , pp. 65
    • Brat, D.1    Weber, C.2    Lorenzen, W.3    Bode, H.B.4    Boles, E.5
  • 6
    • 84872959618 scopus 로고    scopus 로고
    • BIOENERGY Biofuel production on the margins
    • Butterbach-Bahl K., Kiese R. BIOENERGY Biofuel production on the margins. Nature 2013, 493:483-485.
    • (2013) Nature , vol.493 , pp. 483-485
    • Butterbach-Bahl, K.1    Kiese, R.2
  • 7
    • 84859776004 scopus 로고    scopus 로고
    • Pathway engineering via quorum sensing and sRNA riboregulators-interconnected networks and controllers
    • Carter K.K., Valdes J.J., Bentley W.E. Pathway engineering via quorum sensing and sRNA riboregulators-interconnected networks and controllers. Metab. Eng. 2012, 14:281-288.
    • (2012) Metab. Eng. , vol.14 , pp. 281-288
    • Carter, K.K.1    Valdes, J.J.2    Bentley, W.E.3
  • 8
    • 77954860039 scopus 로고    scopus 로고
    • Debottlenecking the 1,3-propanediol pathway by metabolic engineering
    • Celinska E. Debottlenecking the 1,3-propanediol pathway by metabolic engineering. Biotechnol. Adv. 2010, 28:519-530.
    • (2010) Biotechnol. Adv. , vol.28 , pp. 519-530
    • Celinska, E.1
  • 9
    • 84884874505 scopus 로고    scopus 로고
    • An insight into the "-omics" based engineering of streptomycetes for secondary metabolite overproduction
    • Chaudhary A.K., Dhakal D., Sohng J.K. An insight into the "-omics" based engineering of streptomycetes for secondary metabolite overproduction. BioMed. Res. Int. 2013, 2013:968518.
    • (2013) BioMed. Res. Int. , vol.2013 , pp. 968518
    • Chaudhary, A.K.1    Dhakal, D.2    Sohng, J.K.3
  • 10
    • 84886022252 scopus 로고    scopus 로고
    • Programming adaptive control to evolve increased metabolite production
    • Chou H.H., Keasling J.D. Programming adaptive control to evolve increased metabolite production. Nat. Commun. 2013, 4:2595.
    • (2013) Nat. Commun. , vol.4 , pp. 2595
    • Chou, H.H.1    Keasling, J.D.2
  • 11
    • 84887422015 scopus 로고    scopus 로고
    • Engineering dynamic pathway regulation using stress-response promoters
    • Dahl R.H., et al. Engineering dynamic pathway regulation using stress-response promoters. Nat. Biotechnol. 2013, 31:1039-1046.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 1039-1046
    • Dahl, R.H.1
  • 13
    • 84859010199 scopus 로고    scopus 로고
    • A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli
    • Dragosits M., Nicklas D., Tagkopoulos I. A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli. J. Biol. Eng. 2012, 6:2.
    • (2012) J. Biol. Eng. , vol.6 , pp. 2
    • Dragosits, M.1    Nicklas, D.2    Tagkopoulos, I.3
  • 14
    • 84861322005 scopus 로고    scopus 로고
    • Engineering synthetic recursive pathways to generate non-natural small molecules
    • Felnagle E.A., Chaubey A., Noey E.L., Houk K.N., Liao J.C. Engineering synthetic recursive pathways to generate non-natural small molecules. Nat. Chem. Biol. 2012, 8:518-526.
    • (2012) Nat. Chem. Biol. , vol.8 , pp. 518-526
    • Felnagle, E.A.1    Chaubey, A.2    Noey, E.L.3    Houk, K.N.4    Liao, J.C.5
  • 15
    • 67349270900 scopus 로고    scopus 로고
    • Enzymatic assembly of DNA molecules up to several hundred kilobases
    • Gibson D.G., et al. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat. Methods 2009, 6:343-345.
    • (2009) Nat. Methods , vol.6 , pp. 343-345
    • Gibson, D.G.1
  • 16
    • 77956696072 scopus 로고    scopus 로고
    • High-throughput generation, optimization and analysis of genome-scale metabolic models
    • Henry C.S., et al. High-throughput generation, optimization and analysis of genome-scale metabolic models. Nat. Biotechnol. 2010, 28:977-982.
    • (2010) Nat. Biotechnol. , vol.28 , pp. 977-982
    • Henry, C.S.1
  • 17
    • 73149088132 scopus 로고    scopus 로고
    • Engineering static and dynamic control of synthetic pathways
    • Holtz W.J., Keasling J.D. Engineering static and dynamic control of synthetic pathways. Cell 2010, 140:19-23.
    • (2010) Cell , vol.140 , pp. 19-23
    • Holtz, W.J.1    Keasling, J.D.2
  • 18
    • 70350443043 scopus 로고    scopus 로고
    • D-xylose degradation pathway in the halophilic archaeon Haloferax volcanii
    • Johnsen U., et al. d-xylose degradation pathway in the halophilic archaeon Haloferax volcanii. J. Biol. Chem. 2009, 284:27290-27303.
    • (2009) J. Biol. Chem. , vol.284 , pp. 27290-27303
    • Johnsen, U.1
  • 19
    • 84859772410 scopus 로고    scopus 로고
    • Synthetic biology and the development of tools for metabolic engineering
    • Keasling J.D. Synthetic biology and the development of tools for metabolic engineering. Metab. Eng. 2012, 14:189-195.
    • (2012) Metab. Eng. , vol.14 , pp. 189-195
    • Keasling, J.D.1
  • 20
    • 84861440312 scopus 로고    scopus 로고
    • Systems metabolic engineering of microorganisms for natural and non-natural chemicals
    • Lee J.W., et al. Systems metabolic engineering of microorganisms for natural and non-natural chemicals. Nat. Chem. Biol. 2012, 8:536-546.
    • (2012) Nat. Chem. Biol. , vol.8 , pp. 536-546
    • Lee, J.W.1
  • 22
    • 57049098094 scopus 로고    scopus 로고
    • Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels
    • Lee S.K., Chou H., Ham T.S., Lee T.S., Keasling J.D. Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels. Curr. Opin. Biotechnol. 2008, 19:556-563.
    • (2008) Curr. Opin. Biotechnol. , vol.19 , pp. 556-563
    • Lee, S.K.1    Chou, H.2    Ham, T.S.3    Lee, T.S.4    Keasling, J.D.5
  • 23
    • 84869427356 scopus 로고    scopus 로고
    • Metabolic engineering and synthetic biology in strain development
    • Lee S.Y. Metabolic engineering and synthetic biology in strain development. ACS Synth. Biol. 2012, 1:491-492.
    • (2012) ACS Synth. Biol. , vol.1 , pp. 491-492
    • Lee, S.Y.1
  • 24
    • 84884927626 scopus 로고    scopus 로고
    • Model-driven rebalancing of the intracellular redox state for optimization of a heterologous n-butanol pathway in Escherichia coli
    • Lim J.H., Seo S.W., Kim S.Y., Jung G.Y. Model-driven rebalancing of the intracellular redox state for optimization of a heterologous n-butanol pathway in Escherichia coli. Metab. Eng. 2013, 20:56-62.
    • (2013) Metab. Eng. , vol.20 , pp. 56-62
    • Lim, J.H.1    Seo, S.W.2    Kim, S.Y.3    Jung, G.Y.4
  • 25
    • 84861460544 scopus 로고    scopus 로고
    • High yield production of d-xylonic acid from d-xylose using engineered Escherichia coli
    • Liu H., Valdehuesa K.N., Nisola G.M., Ramos K.R., Chung W.J. High yield production of d-xylonic acid from d-xylose using engineered Escherichia coli. Bioresour. Technol. 2012, 115:244-248.
    • (2012) Bioresour. Technol. , vol.115 , pp. 244-248
    • Liu, H.1    Valdehuesa, K.N.2    Nisola, G.M.3    Ramos, K.R.4    Chung, W.J.5
  • 27
    • 84964207544 scopus 로고    scopus 로고
    • High throughput screening of yeast strains for desirable stress tolerant traits for bioethanol production
    • Mukherjee V., et al. High throughput screening of yeast strains for desirable stress tolerant traits for bioethanol production. Yeast 2013, 30:S206.
    • (2013) Yeast , vol.30 , pp. S206
    • Mukherjee, V.1
  • 28
    • 84907311048 scopus 로고    scopus 로고
    • Establishment of a novel gene expression method, BICES (biomass-inducible chromosome-based expression system), and its application to the production of 2,3-butanediol and acetoin
    • Nakashima N., Akita H., Hoshino T. Establishment of a novel gene expression method, BICES (biomass-inducible chromosome-based expression system), and its application to the production of 2,3-butanediol and acetoin. Metab. Eng. 2014, 25:204-214.
    • (2014) Metab. Eng. , vol.25 , pp. 204-214
    • Nakashima, N.1    Akita, H.2    Hoshino, T.3
  • 29
    • 84899052707 scopus 로고    scopus 로고
    • Engineering synergy in biotechnology
    • Nielsen J., et al. Engineering synergy in biotechnology. Nat. Chem. Biol. 2014, 10:319-322.
    • (2014) Nat. Chem. Biol. , vol.10 , pp. 319-322
    • Nielsen, J.1
  • 30
    • 79961179947 scopus 로고    scopus 로고
    • Synergies between synthetic biology and metabolic engineering
    • Nielsen J., Keasling J.D. Synergies between synthetic biology and metabolic engineering. Nat. Biotechnol. 2011, 29:693-695.
    • (2011) Nat. Biotechnol. , vol.29 , pp. 693-695
    • Nielsen, J.1    Keasling, J.D.2
  • 31
    • 84857049924 scopus 로고    scopus 로고
    • Metabolic engineering, synthetic biology and systems biology
    • Nielsen J., Pronk J.T. Metabolic engineering, synthetic biology and systems biology. FEMS Yeast Res. 2012, 12:103.
    • (2012) FEMS Yeast Res. , vol.12 , pp. 103
    • Nielsen, J.1    Pronk, J.T.2
  • 32
    • 0142183458 scopus 로고    scopus 로고
    • Microbial synthesis of the energetic material precursor 1,2,4-butanetriol
    • Niu W., Molefe M.N., Frost J.W. Microbial synthesis of the energetic material precursor 1,2,4-butanetriol. J. Am. Chem. Soc. 2003, 125:12998-12999.
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 12998-12999
    • Niu, W.1    Molefe, M.N.2    Frost, J.W.3
  • 33
    • 84899051891 scopus 로고    scopus 로고
    • Semi-synthetic artemisinin: a model for the use of synthetic biology in pharmaceutical development
    • Paddon C.J., Keasling J.D. Semi-synthetic artemisinin: a model for the use of synthetic biology in pharmaceutical development. Nat. Rev. Microbiol. 2014, 12:355-367.
    • (2014) Nat. Rev. Microbiol. , vol.12 , pp. 355-367
    • Paddon, C.J.1    Keasling, J.D.2
  • 34
    • 84880084177 scopus 로고    scopus 로고
    • Synthetic biology and metabolic engineering approaches to produce biofuels
    • Rabinovitch-Deere C.A., Oliver J.W., Rodriguez G.M., Atsumi S. Synthetic biology and metabolic engineering approaches to produce biofuels. Chem. Rev. 2013, 113:4611-4632.
    • (2013) Chem. Rev. , vol.113 , pp. 4611-4632
    • Rabinovitch-Deere, C.A.1    Oliver, J.W.2    Rodriguez, G.M.3    Atsumi, S.4
  • 35
    • 84898954540 scopus 로고    scopus 로고
    • Quorum sensing-modulated AND-gate promoters control gene expression in response to a combination of endogenous and exogenous signals
    • Shong J., Collins C.H. Quorum sensing-modulated AND-gate promoters control gene expression in response to a combination of endogenous and exogenous signals. ACS Synth. Biol. 2014, 3:238-246.
    • (2014) ACS Synth. Biol. , vol.3 , pp. 238-246
    • Shong, J.1    Collins, C.H.2
  • 36
    • 84877051071 scopus 로고    scopus 로고
    • Reconstruction and visualization of carbohydrate, N-glycosylation pathways in Pichia pastoris CBS7435 using computational and system biology approaches
    • Srivastava A., Somvanshi P., Mishra B.N. Reconstruction and visualization of carbohydrate, N-glycosylation pathways in Pichia pastoris CBS7435 using computational and system biology approaches. Syst. Synth. Biol. 2013, 7:7-22.
    • (2013) Syst. Synth. Biol. , vol.7 , pp. 7-22
    • Srivastava, A.1    Somvanshi, P.2    Mishra, B.N.3
  • 37
    • 33947372119 scopus 로고    scopus 로고
    • Genetic analysis of a novel pathway for d-xylose metabolism in Caulobacter crescentus
    • Stephens C., et al. Genetic analysis of a novel pathway for d-xylose metabolism in Caulobacter crescentus. J. Bacteriol. 2007, 189:2181-2185.
    • (2007) J. Bacteriol. , vol.189 , pp. 2181-2185
    • Stephens, C.1
  • 38
    • 57049159362 scopus 로고    scopus 로고
    • A fast, robust and tunable synthetic gene oscillator
    • Stricker J., et al. A fast, robust and tunable synthetic gene oscillator. Nature 2008, 456:516-519.
    • (2008) Nature , vol.456 , pp. 516-519
    • Stricker, J.1
  • 40
    • 77950858848 scopus 로고    scopus 로고
    • Autonomous induction of recombinant proteins by minimally rewiring native quorum sensing regulon of E. coli
    • Tsao C.Y., Hooshangi S., Wu H.C., Valdes J.J., Bentley W.E. Autonomous induction of recombinant proteins by minimally rewiring native quorum sensing regulon of E. coli. Metab. Eng. 2010, 12:291-297.
    • (2010) Metab. Eng. , vol.12 , pp. 291-297
    • Tsao, C.Y.1    Hooshangi, S.2    Wu, H.C.3    Valdes, J.J.4    Bentley, W.E.5
  • 41
    • 84874115894 scopus 로고    scopus 로고
    • Development of the quorum sensing biotechnological toolbox
    • Tsao C.Y., Quan D.Q., Bentley W.E. Development of the quorum sensing biotechnological toolbox. Curr. Opin. Chem. Eng. 2012, 1:396-402.
    • (2012) Curr. Opin. Chem. Eng. , vol.1 , pp. 396-402
    • Tsao, C.Y.1    Quan, D.Q.2    Bentley, W.E.3
  • 42
    • 85014008203 scopus 로고    scopus 로고
    • Programming the group behaviors of bacterial communities with synthetic cellular communication
    • Kong W.C. Programming the group behaviors of bacterial communities with synthetic cellular communication. Bioresources and Bioprocessing 2014, 1:24.
    • (2014) Bioresources and Bioprocessing , vol.1 , pp. 24
    • Kong, W.C.1
  • 43
    • 84897149238 scopus 로고    scopus 로고
    • Integrating biological redesign: where synthetic biology came from and where it needs to go
    • Way J.C., Collins J.J., Keasling J.D., Silver P.A. Integrating biological redesign: where synthetic biology came from and where it needs to go. Cell 2014, 157:151-161.
    • (2014) Cell , vol.157 , pp. 151-161
    • Way, J.C.1    Collins, J.J.2    Keasling, J.D.3    Silver, P.A.4
  • 44
    • 84905668376 scopus 로고    scopus 로고
    • Improving fatty acids production by engineering dynamic pathway regulation and metabolic control
    • Xu P., Li L., Zhang F., Stephanopoulos G., Koffas M. Improving fatty acids production by engineering dynamic pathway regulation and metabolic control. Proc. Natl. Acad. Sci. USA 2014, 10.1073/pnas.1406401111.
    • (2014) Proc. Natl. Acad. Sci. USA
    • Xu, P.1    Li, L.2    Zhang, F.3    Stephanopoulos, G.4    Koffas, M.5
  • 45
    • 84896847314 scopus 로고    scopus 로고
    • Systematic metabolic engineering of of Escherichia coli for high-yield production of fuel bio-chemical 2,3-butanediol
    • Xu Y., Chu H., Gao C., Tao F., Zhou Z., Li K., Li L., Ma C., Xu P. Systematic metabolic engineering of of Escherichia coli for high-yield production of fuel bio-chemical 2,3-butanediol. Metab. Eng. 2014, 23:22-33.
    • (2014) Metab. Eng. , vol.23 , pp. 22-33
    • Xu, Y.1    Chu, H.2    Gao, C.3    Tao, F.4    Zhou, Z.5    Li, K.6    Li, L.7    Ma, C.8    Xu, P.9
  • 46
    • 79959374585 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol
    • Yim H., et al. Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol. Nat. Chem. Biol. 2011, 7:445-452.
    • (2011) Nat. Chem. Biol. , vol.7 , pp. 445-452
    • Yim, H.1
  • 47
    • 84859633048 scopus 로고    scopus 로고
    • Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids
    • Zhang F., Carothers J.M., Keasling J.D. Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids. Nat. Biotechnol. 2012, 30:354-359.
    • (2012) Nat. Biotechnol. , vol.30 , pp. 354-359
    • Zhang, F.1    Carothers, J.M.2    Keasling, J.D.3
  • 48
    • 80052647009 scopus 로고    scopus 로고
    • Metabolic engineering of microbial pathways for advanced biofuels production
    • Zhang F., Rodriguez S., Keasling J.D. Metabolic engineering of microbial pathways for advanced biofuels production. Curr. Opin. Biotechnol. 2011, 22:775-783.
    • (2011) Curr. Opin. Biotechnol. , vol.22 , pp. 775-783
    • Zhang, F.1    Rodriguez, S.2    Keasling, J.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.