메뉴 건너뛰기




Volumn 62, Issue 2, 2016, Pages 207-221

SHREC Silences Heterochromatin via Distinct Remodeling and Deacetylation Modules

Author keywords

[No Author keywords available]

Indexed keywords

CLR1 PROTEIN; HISTONE DEACETYLASE; METHYL CPG BINDING PROTEIN; REGULATOR PROTEIN; SCAFFOLD PROTEIN; SHREC PROTEIN; UNCLASSIFIED DRUG; CLR2 PROTEIN, S POMBE; FUNGAL DNA; FUNGAL RNA; HETEROCHROMATIN; NUCLEOSOME; PROTEIN BINDING; SCHIZOSACCHAROMYCES POMBE PROTEIN; TRANSCRIPTION FACTOR;

EID: 84963864306     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2016.03.016     Document Type: Article
Times cited : (41)

References (44)
  • 2
    • 0028873187 scopus 로고
    • Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation
    • Allshire R.C., Nimmo E.R., Ekwall K., Javerzat J.P., Cranston G. Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation. Genes Dev. 1995, 9:218-233.
    • (1995) Genes Dev. , vol.9 , pp. 218-233
    • Allshire, R.C.1    Nimmo, E.R.2    Ekwall, K.3    Javerzat, J.P.4    Cranston, G.5
  • 3
    • 84864886701 scopus 로고    scopus 로고
    • Centromeric heterochromatin assembly in fission yeast--balancing transcription, RNA interference and chromatin modification
    • Alper B.J., Lowe B.R., Partridge J.F. Centromeric heterochromatin assembly in fission yeast--balancing transcription, RNA interference and chromatin modification. Chromosome Res. 2012, 20:521-534.
    • (2012) Chromosome Res. , vol.20 , pp. 521-534
    • Alper, B.J.1    Lowe, B.R.2    Partridge, J.F.3
  • 4
    • 84883293097 scopus 로고    scopus 로고
    • Sir2 is required for Clr4 to initiate centromeric heterochromatin assembly in fission yeast
    • Alper B.J., Job G., Yadav R.K., Shanker S., Lowe B.R., Partridge J.F. Sir2 is required for Clr4 to initiate centromeric heterochromatin assembly in fission yeast. EMBO J. 2013, 32:2321-2335.
    • (2013) EMBO J. , vol.32 , pp. 2321-2335
    • Alper, B.J.1    Job, G.2    Yadav, R.K.3    Shanker, S.4    Lowe, B.R.5    Partridge, J.F.6
  • 5
    • 85027919146 scopus 로고    scopus 로고
    • HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin
    • Aygün O., Mehta S., Grewal S.I.S. HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin. Nat. Struct. Mol. Biol. 2013, 20:547-554.
    • (2013) Nat. Struct. Mol. Biol. , vol.20 , pp. 547-554
    • Aygün, O.1    Mehta, S.2    Grewal, S.I.S.3
  • 6
    • 4243144074 scopus 로고    scopus 로고
    • A novel type of silencing factor, Clr2, is necessary for transcriptional silencing at various chromosomal locations in the fission yeast Schizosaccharomyces pombe
    • Bjerling P., Ekwall K., Egel R., Thon G. A novel type of silencing factor, Clr2, is necessary for transcriptional silencing at various chromosomal locations in the fission yeast Schizosaccharomyces pombe. Nucleic Acids Res. 2004, 32:4421-4428.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 4421-4428
    • Bjerling, P.1    Ekwall, K.2    Egel, R.3    Thon, G.4
  • 7
    • 84907584666 scopus 로고    scopus 로고
    • Regulation of Arabidopsis Flowering by the Histone Mark Readers MRG1/2 via Interaction with CONSTANS to Modulate FT Expression
    • Bu Z., Yu Y., Li Z., Liu Y., Jiang W., Huang Y., Dong A.-W. Regulation of Arabidopsis Flowering by the Histone Mark Readers MRG1/2 via Interaction with CONSTANS to Modulate FT Expression. PLOS Genet 2014, 10:e1004617.
    • (2014) PLOS Genet , vol.10
    • Bu, Z.1    Yu, Y.2    Li, Z.3    Liu, Y.4    Jiang, W.5    Huang, Y.6    Dong, A.-W.7
  • 8
    • 35848962284 scopus 로고    scopus 로고
    • Transcription and RNAi in heterochromatic gene silencing
    • Bühler M., Moazed D. Transcription and RNAi in heterochromatic gene silencing. Nat. Struct. Mol. Biol. 2007, 14:1041-1048.
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 1041-1048
    • Bühler, M.1    Moazed, D.2
  • 9
    • 33847680437 scopus 로고    scopus 로고
    • Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast
    • Buker S.M., Iida T., Bühler M., Villén J., Gygi S.P., Nakayama J., Moazed D. Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast. Nat. Struct. Mol. Biol. 2007, 14:200-207.
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 200-207
    • Buker, S.M.1    Iida, T.2    Bühler, M.3    Villén, J.4    Gygi, S.P.5    Nakayama, J.6    Moazed, D.7
  • 10
    • 84877623602 scopus 로고    scopus 로고
    • Distinct roles for Sir2 and RNAi in centromeric heterochromatin nucleation, spreading and maintenance
    • Buscaino A., Lejeune E., Audergon P., Hamilton G., Pidoux A., Allshire R.C. Distinct roles for Sir2 and RNAi in centromeric heterochromatin nucleation, spreading and maintenance. EMBO J. 2013, 32:1250-1264.
    • (2013) EMBO J. , vol.32 , pp. 1250-1264
    • Buscaino, A.1    Lejeune, E.2    Audergon, P.3    Hamilton, G.4    Pidoux, A.5    Allshire, R.C.6
  • 11
    • 84898871225 scopus 로고    scopus 로고
    • Cytosine DNA methylation is found in Drosophila melanogaster but absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and other yeast species
    • Capuano F., Mülleder M., Kok R., Blom H.J., Ralser M. Cytosine DNA methylation is found in Drosophila melanogaster but absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and other yeast species. Anal. Chem. 2014, 86:3697-3702.
    • (2014) Anal. Chem. , vol.86 , pp. 3697-3702
    • Capuano, F.1    Mülleder, M.2    Kok, R.3    Blom, H.J.4    Ralser, M.5
  • 12
    • 82955231555 scopus 로고    scopus 로고
    • RITS-connecting transcription, RNA interference, and heterochromatin assembly in fission yeast
    • Creamer K.M., Partridge J.F. RITS-connecting transcription, RNA interference, and heterochromatin assembly in fission yeast. Wiley Interdiscip. Rev. RNA 2011, 2:632-646.
    • (2011) Wiley Interdiscip. Rev. RNA , vol.2 , pp. 632-646
    • Creamer, K.M.1    Partridge, J.F.2
  • 14
    • 0028057751 scopus 로고
    • Mutations in rik1, clr2, clr3 and clr4 genes asymmetrically derepress the silent mating-type loci in fission yeast
    • Ekwall K., Ruusala T. Mutations in rik1, clr2, clr3 and clr4 genes asymmetrically derepress the silent mating-type loci in fission yeast. Genetics 1994, 136:53-64.
    • (1994) Genetics , vol.136 , pp. 53-64
    • Ekwall, K.1    Ruusala, T.2
  • 15
    • 77955903649 scopus 로고    scopus 로고
    • Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions
    • Garcia J.F., Dumesic P.A., Hartley P.D., El-Samad H., Madhani H.D. Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions. Genes Dev. 2010, 24:1758-1771.
    • (2010) Genes Dev. , vol.24 , pp. 1758-1771
    • Garcia, J.F.1    Dumesic, P.A.2    Hartley, P.D.3    El-Samad, H.4    Madhani, H.D.5
  • 17
    • 0031692281 scopus 로고    scopus 로고
    • Histone deacetylase homologs regulate epigenetic inheritance of transcriptional silencing and chromosome segregation in fission yeast
    • Grewal S.I., Bonaduce M.J., Klar A.J. Histone deacetylase homologs regulate epigenetic inheritance of transcriptional silencing and chromosome segregation in fission yeast. Genetics 1998, 150:563-576.
    • (1998) Genetics , vol.150 , pp. 563-576
    • Grewal, S.I.1    Bonaduce, M.J.2    Klar, A.J.3
  • 19
    • 77649293134 scopus 로고    scopus 로고
    • Characterization of the tandem CWCH2 sequence motif: a hallmark of inter-zinc finger interactions
    • Hatayama M., Aruga J. Characterization of the tandem CWCH2 sequence motif: a hallmark of inter-zinc finger interactions. BMC Evol. Biol. 2010, 10:53.
    • (2010) BMC Evol. Biol. , vol.10 , pp. 53
    • Hatayama, M.1    Aruga, J.2
  • 20
    • 77956522905 scopus 로고    scopus 로고
    • The chromodomains of the Chd1 chromatin remodeler regulate DNA access to the ATPase motor
    • Hauk G., McKnight J.N., Nodelman I.M., Bowman G.D. The chromodomains of the Chd1 chromatin remodeler regulate DNA access to the ATPase motor. Mol. Cell 2010, 39:711-723.
    • (2010) Mol. Cell , vol.39 , pp. 711-723
    • Hauk, G.1    McKnight, J.N.2    Nodelman, I.M.3    Bowman, G.D.4
  • 21
    • 0031792779 scopus 로고    scopus 로고
    • Identification and characterization of a family of mammalian methyl-CpG binding proteins
    • Hendrich B., Bird A. Identification and characterization of a family of mammalian methyl-CpG binding proteins. Mol. Cell. Biol. 1998, 18:6538-6547.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 6538-6547
    • Hendrich, B.1    Bird, A.2
  • 22
    • 84860633017 scopus 로고    scopus 로고
    • NuRD and pluripotency: a complex balancing act
    • Hu G., Wade P.A. NuRD and pluripotency: a complex balancing act. Cell Stem Cell 2012, 10:497-503.
    • (2012) Cell Stem Cell , vol.10 , pp. 497-503
    • Hu, G.1    Wade, P.A.2
  • 23
  • 24
    • 84918841904 scopus 로고    scopus 로고
    • Specificity in circadian clock feedback from targeted reconstitution of the NuRD corepressor
    • Kim J.Y., Kwak P.B., Weitz C.J. Specificity in circadian clock feedback from targeted reconstitution of the NuRD corepressor. Mol. Cell 2014, 56:738-748.
    • (2014) Mol. Cell , vol.56 , pp. 738-748
    • Kim, J.Y.1    Kwak, P.B.2    Weitz, C.J.3
  • 25
    • 79960844248 scopus 로고    scopus 로고
    • Cancer biology and NuRD: a multifaceted chromatin remodelling complex
    • Lai A.Y., Wade P.A. Cancer biology and NuRD: a multifaceted chromatin remodelling complex. Nat. Rev. Cancer 2011, 11:588-596.
    • (2011) Nat. Rev. Cancer , vol.11 , pp. 588-596
    • Lai, A.Y.1    Wade, P.A.2
  • 27
    • 57749097725 scopus 로고    scopus 로고
    • HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms
    • Motamedi M.R., Hong E.-J.E., Li X., Gerber S., Denison C., Gygi S., Moazed D. HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms. Mol. Cell 2008, 32:778-790.
    • (2008) Mol. Cell , vol.32 , pp. 778-790
    • Motamedi, M.R.1    Hong, E.-J.E.2    Li, X.3    Gerber, S.4    Denison, C.5    Gygi, S.6    Moazed, D.7
  • 29
    • 84874766461 scopus 로고    scopus 로고
    • Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4
    • Otani J., Arita K., Kato T., Kinoshita M., Kimura H., Suetake I., Tajima S., Ariyoshi M., Shirakawa M. Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4. J. Biol. Chem. 2013, 288:6351-6362.
    • (2013) J. Biol. Chem. , vol.288 , pp. 6351-6362
    • Otani, J.1    Arita, K.2    Kato, T.3    Kinoshita, M.4    Kimura, H.5    Suetake, I.6    Tajima, S.7    Ariyoshi, M.8    Shirakawa, M.9
  • 32
    • 82955167892 scopus 로고    scopus 로고
    • The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS
    • Schalch T., Job G., Shanker S., Partridge J.F., Joshua-Tor L. The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS. Nat. Struct. Mol. Biol. 2011, 18:1351-1357.
    • (2011) Nat. Struct. Mol. Biol. , vol.18 , pp. 1351-1357
    • Schalch, T.1    Job, G.2    Shanker, S.3    Partridge, J.F.4    Joshua-Tor, L.5
  • 33
    • 0035118229 scopus 로고    scopus 로고
    • Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD
    • Schultz D.C., Friedman J.R., Rauscher F.J. Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD. Genes Dev. 2001, 15:428-443.
    • (2001) Genes Dev. , vol.15 , pp. 428-443
    • Schultz, D.C.1    Friedman, J.R.2    Rauscher, F.J.3
  • 34
    • 0027393609 scopus 로고
    • Zinc- and sequence-dependent binding to nucleic acids by the N-terminal zinc finger of the HIV-1 nucleocapsid protein: NMR structure of the complex with the Psi-site analog, dACGCC
    • South T.L., Summers M.F. Zinc- and sequence-dependent binding to nucleic acids by the N-terminal zinc finger of the HIV-1 nucleocapsid protein: NMR structure of the complex with the Psi-site analog, dACGCC. Protein Sci. 1993, 2:3-19.
    • (1993) Protein Sci. , vol.2 , pp. 3-19
    • South, T.L.1    Summers, M.F.2
  • 37
    • 0026652376 scopus 로고
    • The clr1 locus regulates the expression of the cryptic mating-type loci of fission yeast
    • Thon G., Klar A.J. The clr1 locus regulates the expression of the cryptic mating-type loci of fission yeast. Genetics 1992, 131:287-296.
    • (1992) Genetics , vol.131 , pp. 287-296
    • Thon, G.1    Klar, A.J.2
  • 38
    • 0027963389 scopus 로고
    • Three additional linkage groups that repress transcription and meiotic recombination in the mating-type region of Schizosaccharomyces pombe
    • Thon G., Cohen A., Klar A.J. Three additional linkage groups that repress transcription and meiotic recombination in the mating-type region of Schizosaccharomyces pombe. Genetics 1994, 138:29-38.
    • (1994) Genetics , vol.138 , pp. 29-38
    • Thon, G.1    Cohen, A.2    Klar, A.J.3
  • 39
    • 84930537565 scopus 로고    scopus 로고
    • Structure and function insights into the NuRD chromatin remodeling complex
    • Torchy M.P., Hamiche A., Klaholz B.P. Structure and function insights into the NuRD chromatin remodeling complex. Cell. Mol. Life Sci. 2015, 72:2491-2507.
    • (2015) Cell. Mol. Life Sci. , vol.72 , pp. 2491-2507
    • Torchy, M.P.1    Hamiche, A.2    Klaholz, B.P.3
  • 41
    • 0028963301 scopus 로고
    • The fission yeast gene pmt1+ encodes a DNA methyltransferase homologue
    • Wilkinson C.R., Bartlett R., Nurse P., Bird A.P. The fission yeast gene pmt1+ encodes a DNA methyltransferase homologue. Nucleic Acids Res. 1995, 23:203-210.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 203-210
    • Wilkinson, C.R.1    Bartlett, R.2    Nurse, P.3    Bird, A.P.4
  • 42
    • 0032252209 scopus 로고    scopus 로고
    • NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities
    • Xue Y., Wong J., Moreno G.T., Young M.K., Côté J., Wang W. NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities. Mol. Cell 1998, 2:851-861.
    • (1998) Mol. Cell , vol.2 , pp. 851-861
    • Xue, Y.1    Wong, J.2    Moreno, G.T.3    Young, M.K.4    Côté, J.5    Wang, W.6
  • 43
    • 26944434789 scopus 로고    scopus 로고
    • The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast
    • Yamada T., Fischle W., Sugiyama T., Allis C.D., Grewal S.I.S. The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast. Mol. Cell 2005, 20:173-185.
    • (2005) Mol. Cell , vol.20 , pp. 173-185
    • Yamada, T.1    Fischle, W.2    Sugiyama, T.3    Allis, C.D.4    Grewal, S.I.S.5
  • 44
    • 84878443103 scopus 로고    scopus 로고
    • Structure and function of the BAH domain in chromatin biology
    • Yang N., Xu R.-M. Structure and function of the BAH domain in chromatin biology. Crit. Rev. Biochem. Mol. Biol. 2013, 48:211-221.
    • (2013) Crit. Rev. Biochem. Mol. Biol. , vol.48 , pp. 211-221
    • Yang, N.1    Xu, R.-M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.