-
1
-
-
84925486325
-
Transposable elements and genome size variations in plants
-
Lee S.I., Kim N.S. Transposable elements and genome size variations in plants. Genomics Inform 2014, 12:87-97.
-
(2014)
Genomics Inform
, vol.12
, pp. 87-97
-
-
Lee, S.I.1
Kim, N.S.2
-
2
-
-
84866436963
-
The repetitive DNA content of eukaryotic genomes
-
Lopez-Flores I., Garrido-Ramos M.A. The repetitive DNA content of eukaryotic genomes. Genome Dyn 2012, 7:1-28.
-
(2012)
Genome Dyn
, vol.7
, pp. 1-28
-
-
Lopez-Flores, I.1
Garrido-Ramos, M.A.2
-
3
-
-
70350455280
-
Epigenetic regulation of Mammalian genomes by transposable elements
-
Huda A., Jordan I.K. Epigenetic regulation of Mammalian genomes by transposable elements. Ann N Y Acad Sci 2009, 1178:276-284.
-
(2009)
Ann N Y Acad Sci
, vol.1178
, pp. 276-284
-
-
Huda, A.1
Jordan, I.K.2
-
4
-
-
85103345199
-
-
ASM Press, Washington, DC
-
Craig N.L., Rice P.A., Lambowitz A.M., Chandler M., Gellert M., Sandmeyer S.B. Mobile DNA III 2015, ASM Press, Washington, DC.
-
(2015)
Mobile DNA III
-
-
Craig, N.L.1
Rice, P.A.2
Lambowitz, A.M.3
Chandler, M.4
Gellert, M.5
Sandmeyer, S.B.6
-
5
-
-
33645227457
-
Self-synthesizing DNA transposons in eukaryotes
-
Kapitonov V.V., Jurka J. Self-synthesizing DNA transposons in eukaryotes. Proc Natl Acad Sci U S A 2006, 103:4540-4545.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 4540-4545
-
-
Kapitonov, V.V.1
Jurka, J.2
-
6
-
-
33846939973
-
Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses
-
Pritham E.J., Putliwala T., Feschotte C. Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses. Gene 2007, 390:3-17.
-
(2007)
Gene
, vol.390
, pp. 3-17
-
-
Pritham, E.J.1
Putliwala, T.2
Feschotte, C.3
-
7
-
-
24644509691
-
Non-mammalian c-integrases are encoded by giant transposable elements
-
Feschotte C., Pritham E.J. Non-mammalian c-integrases are encoded by giant transposable elements. Trends Genet 2005, 21:551-552.
-
(2005)
Trends Genet
, vol.21
, pp. 551-552
-
-
Feschotte, C.1
Pritham, E.J.2
-
8
-
-
84901235660
-
Conservation of major and minor jelly-roll capsid proteins in Polinton (Maverick) transposons suggests that they are bona fide viruses
-
Krupovic M., Bamford D.H., Koonin E.V. Conservation of major and minor jelly-roll capsid proteins in Polinton (Maverick) transposons suggests that they are bona fide viruses. Biol Direct 2014, 9:6.
-
(2014)
Biol Direct
, vol.9
, pp. 6
-
-
Krupovic, M.1
Bamford, D.H.2
Koonin, E.V.3
-
9
-
-
84961102159
-
Virophage concept, The
-
Wiley
-
Gaia M., Colson P., Desnues C., La Scola B. Virophage concept, The. eLS 2013, Wiley.
-
(2013)
eLS
-
-
Gaia, M.1
Colson, P.2
Desnues, C.3
La Scola, B.4
-
10
-
-
84858163750
-
Sputnik, a virophage infecting the viral domain of life
-
Desnues C., Boyer M., Raoult D. Sputnik, a virophage infecting the viral domain of life. Adv Virus Res 2012, 82:63-89.
-
(2012)
Adv Virus Res
, vol.82
, pp. 63-89
-
-
Desnues, C.1
Boyer, M.2
Raoult, D.3
-
11
-
-
51349125147
-
The virophage as a unique parasite of the giant mimivirus
-
La Scola B., Desnues C., Pagnier I., Robert C., Barrassi L., Fournous G., Merchat M., Suzan-Monti M., Forterre P., Koonin E., et al. The virophage as a unique parasite of the giant mimivirus. Nature 2008, 455:100-104.
-
(2008)
Nature
, vol.455
, pp. 100-104
-
-
La Scola, B.1
Desnues, C.2
Pagnier, I.3
Robert, C.4
Barrassi, L.5
Fournous, G.6
Merchat, M.7
Suzan-Monti, M.8
Forterre, P.9
Koonin, E.10
-
13
-
-
84946729375
-
A novel group of diverse Polinton-like viruses discovered by metagenome analysis
-
Yutin N., Shevchenko S., Kapitonov V., Krupovic M., Koonin E.V. A novel group of diverse Polinton-like viruses discovered by metagenome analysis. BMC Biol 2015, 13:95.
-
(2015)
BMC Biol
, vol.13
, pp. 95
-
-
Yutin, N.1
Shevchenko, S.2
Kapitonov, V.3
Krupovic, M.4
Koonin, E.V.5
-
14
-
-
79960554003
-
Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems
-
Makarova K.S., Aravind L., Wolf Y.I., Koonin E.V. Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems. Biol Direct 2011, 6:38.
-
(2011)
Biol Direct
, vol.6
, pp. 38
-
-
Makarova, K.S.1
Aravind, L.2
Wolf, Y.I.3
Koonin, E.V.4
-
15
-
-
34248374277
-
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
-
Makarova K.S., Grishin N.V., Shabalina S.A., Wolf Y.I., Koonin E.V. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct 2006, 1:7.
-
(2006)
Biol Direct
, vol.1
, pp. 7
-
-
Makarova, K.S.1
Grishin, N.V.2
Shabalina, S.A.3
Wolf, Y.I.4
Koonin, E.V.5
-
16
-
-
84944449180
-
An updated evolutionary classification of CRISPR-Cas systems
-
Makarova K.S., Wolf Y.I., Alkhnbashi O.S., Costa F., Shah S.A., Saunders S.J., Barrangou R., Brouns S.J., Charpentier E., Haft D.H., et al. An updated evolutionary classification of CRISPR-Cas systems. Nat Rev Microbiol 2015, 13:722-736.
-
(2015)
Nat Rev Microbiol
, vol.13
, pp. 722-736
-
-
Makarova, K.S.1
Wolf, Y.I.2
Alkhnbashi, O.S.3
Costa, F.4
Shah, S.A.5
Saunders, S.J.6
Barrangou, R.7
Brouns, S.J.8
Charpentier, E.9
Haft, D.H.10
-
17
-
-
84902533278
-
Unravelling the structural and mechanistic basis of CRISPR-Cas systems
-
van der Oost J., Westra E.R., Jackson R.N., Wiedenheft B. Unravelling the structural and mechanistic basis of CRISPR-Cas systems. Nat Rev Microbiol 2014, 12:479-492.
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 479-492
-
-
van der Oost, J.1
Westra, E.R.2
Jackson, R.N.3
Wiedenheft, B.4
-
18
-
-
84902203191
-
Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity
-
Krupovic M., Makarova K.S., Forterre P., Prangishvili D., Koonin E.V. Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity. BMC Biol 2014, 12:36.
-
(2014)
BMC Biol
, vol.12
, pp. 36
-
-
Krupovic, M.1
Makarova, K.S.2
Forterre, P.3
Prangishvili, D.4
Koonin, E.V.5
-
19
-
-
0036606136
-
A novel family of mobile genetic elements is limited to the germline genome in Tetrahymena thermophila
-
Wuitschick J.D., Gershan J.A., Lochowicz A.J., Li S., Karrer K.M. A novel family of mobile genetic elements is limited to the germline genome in Tetrahymena thermophila. Nucleic Acids Res 2002, 30:2524-2537.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2524-2537
-
-
Wuitschick, J.D.1
Gershan, J.A.2
Lochowicz, A.J.3
Li, S.4
Karrer, K.M.5
-
20
-
-
84878007916
-
Virophages, polintons, and transpovirons: a complex evolutionary network of diverse selfish genetic elements with different reproduction strategies
-
Yutin N., Raoult D., Koonin E.V. Virophages, polintons, and transpovirons: a complex evolutionary network of diverse selfish genetic elements with different reproduction strategies. Virol J 2013, 10:158.
-
(2013)
Virol J
, vol.10
, pp. 158
-
-
Yutin, N.1
Raoult, D.2
Koonin, E.V.3
-
21
-
-
84868550621
-
Structure of Sputnik, a virophage, at 3.5-A resolution
-
Zhang X., Sun S., Xiang Y., Wong J., Klose T., Raoult D., Rossmann M.G. Structure of Sputnik, a virophage, at 3.5-A resolution. Proc Natl Acad Sci U S A 2012, 109:18431-18436.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 18431-18436
-
-
Zhang, X.1
Sun, S.2
Xiang, Y.3
Wong, J.4
Klose, T.5
Raoult, D.6
Rossmann, M.G.7
-
22
-
-
56349116764
-
Virus evolution: how far does the double beta-barrel viral lineage extend?
-
Krupovic M., Bamford D.H. Virus evolution: how far does the double beta-barrel viral lineage extend?. Nat Rev Microbiol 2008, 6:941-948.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 941-948
-
-
Krupovic, M.1
Bamford, D.H.2
-
23
-
-
78650627880
-
Giant virus with a remarkable complement of genes infects marine zooplankton
-
Fischer M.G., Allen M.J., Wilson W.H., Suttle C.A. Giant virus with a remarkable complement of genes infects marine zooplankton. Proc Natl Acad Sci U S A 2010, 107:19508-19513.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 19508-19513
-
-
Fischer, M.G.1
Allen, M.J.2
Wilson, W.H.3
Suttle, C.A.4
-
24
-
-
79953806385
-
A virophage at the origin of large DNA transposons
-
Fischer M.G., Suttle C.A. A virophage at the origin of large DNA transposons. Science 2011, 332:231-234.
-
(2011)
Science
, vol.332
, pp. 231-234
-
-
Fischer, M.G.1
Suttle, C.A.2
-
25
-
-
79955006806
-
Virophage control of Antarctic algal host-virus dynamics
-
Yau S., Lauro F.M., DeMaere M.Z., Brown M.V., Thomas T., Raftery M.J., Andrews-Pfannkoch C., Lewis M., Hoffman J.M., Gibson J.A., et al. Virophage control of Antarctic algal host-virus dynamics. Proc Natl Acad Sci U S A 2011, 108:6163-6168.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 6163-6168
-
-
Yau, S.1
Lauro, F.M.2
DeMaere, M.Z.3
Brown, M.V.4
Thomas, T.5
Raftery, M.J.6
Andrews-Pfannkoch, C.7
Lewis, M.8
Hoffman, J.M.9
Gibson, J.A.10
-
26
-
-
84928556807
-
A new family of hybrid virophages from an animal gut metagenome
-
Yutin N., Kapitonov V.V., Koonin E.V. A new family of hybrid virophages from an animal gut metagenome. Biol Direct 2015, 10:19.
-
(2015)
Biol Direct
, vol.10
, pp. 19
-
-
Yutin, N.1
Kapitonov, V.V.2
Koonin, E.V.3
-
27
-
-
84920842319
-
Three novel virophage genomes discovered from Yellowstone Lake metagenomes
-
Zhou J., Sun D., Childers A., McDermott T.R., Wang Y., Liles M.R. Three novel virophage genomes discovered from Yellowstone Lake metagenomes. J Virol 2015, 89:1278-1285.
-
(2015)
J Virol
, vol.89
, pp. 1278-1285
-
-
Zhou, J.1
Sun, D.2
Childers, A.3
McDermott, T.R.4
Wang, Y.5
Liles, M.R.6
-
28
-
-
84875777180
-
Diversity of virophages in metagenomic data sets
-
Zhou J., Zhang W., Yan S., Xiao J., Zhang Y., Li B., Pan Y., Wang Y. Diversity of virophages in metagenomic data sets. J Virol 2013, 87:4225-4236.
-
(2013)
J Virol
, vol.87
, pp. 4225-4236
-
-
Zhou, J.1
Zhang, W.2
Yan, S.3
Xiao, J.4
Zhang, Y.5
Li, B.6
Pan, Y.7
Wang, Y.8
-
29
-
-
84949794941
-
A new Zamilon-like virophage partial genome assembled from a bioreactor metagenome
-
Bekliz M., Verneau J., Benamar S., Raoult D., La Scola B., Colson P. A new Zamilon-like virophage partial genome assembled from a bioreactor metagenome. Front Microbiol 2015, 6:1308.
-
(2015)
Front Microbiol
, vol.6
, pp. 1308
-
-
Bekliz, M.1
Verneau, J.2
Benamar, S.3
Raoult, D.4
La Scola, B.5
Colson, P.6
-
30
-
-
84899701948
-
Zamilon, a novel virophage with Mimiviridae host specificity
-
Gaia M., Benamar S., Boughalmi M., Pagnier I., Croce O., Colson P., Raoult D., La Scola B. Zamilon, a novel virophage with Mimiviridae host specificity. PLoS ONE 2014, 9:e94923.
-
(2014)
PLoS ONE
, vol.9
, pp. e94923
-
-
Gaia, M.1
Benamar, S.2
Boughalmi, M.3
Pagnier, I.4
Croce, O.5
Colson, P.6
Raoult, D.7
La Scola, B.8
-
31
-
-
84900825962
-
Samba virus: a novel mimivirus from a giant rain forest, the Brazilian Amazon
-
Campos R.K., Boratto P.V., Assis F.L., Aguiar E.R., Silva L.C., Albarnaz J.D., Dornas F.P., Trindade G.S., Ferreira P.P., Marques J.T., et al. Samba virus: a novel mimivirus from a giant rain forest, the Brazilian Amazon. Virol J 2014, 11:95.
-
(2014)
Virol J
, vol.11
, pp. 95
-
-
Campos, R.K.1
Boratto, P.V.2
Assis, F.L.3
Aguiar, E.R.4
Silva, L.C.5
Albarnaz, J.D.6
Dornas, F.P.7
Trindade, G.S.8
Ferreira, P.P.9
Marques, J.T.10
-
32
-
-
84868146121
-
Provirophages and transpovirons as the diverse mobilome of giant viruses
-
Desnues C., La Scola B., Yutin N., Fournous G., Robert C., Azza S., Jardot P., Monteil S., Campocasso A., Koonin E.V., et al. Provirophages and transpovirons as the diverse mobilome of giant viruses. Proc Natl Acad Sci U S A 2012, 109:18078-18083.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 18078-18083
-
-
Desnues, C.1
La Scola, B.2
Yutin, N.3
Fournous, G.4
Robert, C.5
Azza, S.6
Jardot, P.7
Monteil, S.8
Campocasso, A.9
Koonin, E.V.10
-
33
-
-
84942910954
-
Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses
-
Blanc G., Gallot-Lavallee L., Maumus F. Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses. Proc Natl Acad Sci U S A 2015, 112:E5318-E5326.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. E5318-E5326
-
-
Blanc, G.1
Gallot-Lavallee, L.2
Maumus, F.3
-
34
-
-
84942908366
-
Virophages go nuclear in the marine alga Bigelowiella natans
-
Fischer M.G. Virophages go nuclear in the marine alga Bigelowiella natans. Proc Natl Acad Sci U S A 2015, 112:11750-11751.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 11750-11751
-
-
Fischer, M.G.1
-
35
-
-
84952861406
-
A classification system for virophages and satellite viruses
-
Krupovic M., Kuhn J.H., Fischer M.G. A classification system for virophages and satellite viruses. Arch Virol 2016, 161:233-247.
-
(2016)
Arch Virol
, vol.161
, pp. 233-247
-
-
Krupovic, M.1
Kuhn, J.H.2
Fischer, M.G.3
-
36
-
-
84879516342
-
Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes
-
Santini S., Jeudy S., Bartoli J., Poirot O., Lescot M., Abergel C., Barbe V., Wommack K.E., Noordeloos A.A., Brussaard C.P., et al. Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes. Proc Natl Acad Sci U S A 2013, 110:10800-10805.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 10800-10805
-
-
Santini, S.1
Jeudy, S.2
Bartoli, J.3
Poirot, O.4
Lescot, M.5
Abergel, C.6
Barbe, V.7
Wommack, K.E.8
Noordeloos, A.A.9
Brussaard, C.P.10
-
37
-
-
84875689946
-
Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family
-
Yutin N., Colson P., Raoult D., Koonin E.V. Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family. Virol J 2013, 10:106.
-
(2013)
Virol J
, vol.10
, pp. 106
-
-
Yutin, N.1
Colson, P.2
Raoult, D.3
Koonin, E.V.4
-
38
-
-
84890612383
-
Cultivation, purification and crystallization of virus of green algae Tetraselmis viridis
-
Sizov D.V., Polischuk V.P. Cultivation, purification and crystallization of virus of green algae Tetraselmis viridis. Biopolym Cell 2006, 22:243-245.
-
(2006)
Biopolym Cell
, vol.22
, pp. 243-245
-
-
Sizov, D.V.1
Polischuk, V.P.2
-
39
-
-
84923103071
-
Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution
-
Krupovic M., Koonin E.V. Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution. Nat Rev Microbiol 2015, 13:105-115.
-
(2015)
Nat Rev Microbiol
, vol.13
, pp. 105-115
-
-
Krupovic, M.1
Koonin, E.V.2
-
40
-
-
77956352772
-
Ginger DNA transposons in eukaryotes and their evolutionary relationships with long terminal repeat retrotransposons
-
Bao W., Kapitonov V.V., Jurka J. Ginger DNA transposons in eukaryotes and their evolutionary relationships with long terminal repeat retrotransposons. Mob DNA 2010, 1:3.
-
(2010)
Mob DNA
, vol.1
, pp. 3
-
-
Bao, W.1
Kapitonov, V.V.2
Jurka, J.3
-
41
-
-
0242351787
-
Genetic content and evolution of adenoviruses
-
Davison A.J., Benko M., Harrach B. Genetic content and evolution of adenoviruses. J Gen Virol 2003, 84:2895-2908.
-
(2003)
J Gen Virol
, vol.84
, pp. 2895-2908
-
-
Davison, A.J.1
Benko, M.2
Harrach, B.3
-
42
-
-
84888016591
-
"Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses
-
Colson P., De Lamballerie X., Yutin N., Asgari S., Bigot Y., Bideshi D.K., Cheng X.W., Federici B.A., Van Etten J.L., Koonin E.V., et al. "Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses. Arch Virol 2013, 158:2517-2521.
-
(2013)
Arch Virol
, vol.158
, pp. 2517-2521
-
-
Colson, P.1
De Lamballerie, X.2
Yutin, N.3
Asgari, S.4
Bigot, Y.5
Bideshi, D.K.6
Cheng, X.W.7
Federici, B.A.8
Van Etten, J.L.9
Koonin, E.V.10
-
43
-
-
46949103170
-
Linear protein-primed replicating plasmids in eukaryotic microbes
-
Klassen R., Meinhardt F. Linear protein-primed replicating plasmids in eukaryotic microbes. Microbiol Monogr 2007, 7:188-216.
-
(2007)
Microbiol Monogr
, vol.7
, pp. 188-216
-
-
Klassen, R.1
Meinhardt, F.2
-
44
-
-
80455155966
-
Computational analysis of DNA replicases in double-stranded DNA viruses: relationship with the genome size
-
Kazlauskas D., Venclovas C. Computational analysis of DNA replicases in double-stranded DNA viruses: relationship with the genome size. Nucleic Acids Res 2011, 39:8291-8305.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 8291-8305
-
-
Kazlauskas, D.1
Venclovas, C.2
-
45
-
-
84902953717
-
Complete genome sequences of pigeon adenovirus 1 and duck adenovirus 2 extend the number of species within the genus Aviadenovirus
-
Marek A., Kajan G.L., Kosiol C., Harrach B., Schlotterer C., Hess M. Complete genome sequences of pigeon adenovirus 1 and duck adenovirus 2 extend the number of species within the genus Aviadenovirus. Virology 2014, 462-463:107-114.
-
(2014)
Virology
, pp. 107-114
-
-
Marek, A.1
Kajan, G.L.2
Kosiol, C.3
Harrach, B.4
Schlotterer, C.5
Hess, M.6
-
46
-
-
84902174170
-
Evolution of eukaryotic single-stranded DNA viruses of the Bidnaviridae family from genes of four other groups of widely different viruses
-
Krupovic M., Koonin E.V. Evolution of eukaryotic single-stranded DNA viruses of the Bidnaviridae family from genes of four other groups of widely different viruses. Sci Rep 2014, 4:5347.
-
(2014)
Sci Rep
, vol.4
, pp. 5347
-
-
Krupovic, M.1
Koonin, E.V.2
-
47
-
-
84937511221
-
Origins and evolution of viruses of eukaryotes: the ultimate modularity
-
Koonin E.V., Dolja V.V., Krupovic M. Origins and evolution of viruses of eukaryotes: the ultimate modularity. Virology 2015, 479-480:2-25.
-
(2015)
Virology
, pp. 2-25
-
-
Koonin, E.V.1
Dolja, V.V.2
Krupovic, M.3
-
48
-
-
84926049825
-
Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses
-
Koonin E.V., Krupovic M., Yutin N. Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses. Ann N Y Acad Sci 2015, 1341:10-24.
-
(2015)
Ann N Y Acad Sci
, vol.1341
, pp. 10-24
-
-
Koonin, E.V.1
Krupovic, M.2
Yutin, N.3
-
49
-
-
84455199962
-
Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly
-
Krupovic M., Bamford D.H. Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly. Curr Opin Virol 2011, 1:118-124.
-
(2011)
Curr Opin Virol
, vol.1
, pp. 118-124
-
-
Krupovic, M.1
Bamford, D.H.2
-
50
-
-
84898995103
-
Structural similarities in DNA packaging and delivery apparatuses in Herpesvirus and dsDNA bacteriophages
-
Rixon F.J., Schmid M.F. Structural similarities in DNA packaging and delivery apparatuses in Herpesvirus and dsDNA bacteriophages. Curr Opin Virol 2014, 5:105-110.
-
(2014)
Curr Opin Virol
, vol.5
, pp. 105-110
-
-
Rixon, F.J.1
Schmid, M.F.2
-
51
-
-
84885961394
-
Networks of evolutionary interactions underlying the polyphyletic origin of ssDNA viruses
-
Krupovic M. Networks of evolutionary interactions underlying the polyphyletic origin of ssDNA viruses. Curr Opin Virol 2013, 3:578-586.
-
(2013)
Curr Opin Virol
, vol.3
, pp. 578-586
-
-
Krupovic, M.1
-
52
-
-
84902010986
-
Cas1-Cas2 complex formation mediates spacer acquisition during CRISPR-Cas adaptive immunity
-
Nuñez J.K., Kranzusch P.J., Noeske J., Wright A.V., Davies C.W., Doudna J.A. Cas1-Cas2 complex formation mediates spacer acquisition during CRISPR-Cas adaptive immunity. Nat Struct Mol Biol 2014, 21:528-534.
-
(2014)
Nat Struct Mol Biol
, vol.21
, pp. 528-534
-
-
Nuñez, J.K.1
Kranzusch, P.J.2
Noeske, J.3
Wright, A.V.4
Davies, C.W.5
Doudna, J.A.6
-
53
-
-
84941907747
-
Intrinsic sequence specificity of the Cas1 integrase directs new spacer acquisition
-
Rollie C., Schneider S., Brinkmann A.S., Bolt E.L., White M.F. Intrinsic sequence specificity of the Cas1 integrase directs new spacer acquisition. eLife 2015, 4:e08716.
-
(2015)
eLife
, vol.4
, pp. e08716
-
-
Rollie, C.1
Schneider, S.2
Brinkmann, A.S.3
Bolt, E.L.4
White, M.F.5
-
54
-
-
84924664059
-
Integrase-mediated spacer acquisition during CRISPR-Cas adaptive immunity
-
Nuñez J.K., Lee A.S., Engelman A., Doudna J.A. Integrase-mediated spacer acquisition during CRISPR-Cas adaptive immunity. Nature 2015, 519:193-198.
-
(2015)
Nature
, vol.519
, pp. 193-198
-
-
Nuñez, J.K.1
Lee, A.S.2
Engelman, A.3
Doudna, J.A.4
-
55
-
-
84908506412
-
CRISPR-Cas immunity and mobile DNA: a new superfamily of DNA transposons encoding a Cas1 endonuclease
-
Hickman A.B., Dyda F. CRISPR-Cas immunity and mobile DNA: a new superfamily of DNA transposons encoding a Cas1 endonuclease. Mob DNA 2014, 5:23.
-
(2014)
Mob DNA
, vol.5
, pp. 23
-
-
Hickman, A.B.1
Dyda, F.2
-
56
-
-
84961336907
-
The casposon-encoded Cas1 protein from Aciduliprofundum boonei is a DNA integrase that generates target site duplications
-
Hickman A.B., Dyda F. The casposon-encoded Cas1 protein from Aciduliprofundum boonei is a DNA integrase that generates target site duplications. Nucleic Acids Res 2015, 43:10576-10587.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 10576-10587
-
-
Hickman, A.B.1
Dyda, F.2
-
57
-
-
85007236066
-
Recent mobility of casposons, self-synthesizing transposons at the origin of the CRISPR-Cas immunity
-
(in press)
-
Krupovic M., Shmakov S., Makarova K.S., Forterre P., Koonin E.V. Recent mobility of casposons, self-synthesizing transposons at the origin of the CRISPR-Cas immunity. Genome Biol Evol 2016, (in press). 10.1093/gbe/evw006.
-
(2016)
Genome Biol Evol
-
-
Krupovic, M.1
Shmakov, S.2
Makarova, K.S.3
Forterre, P.4
Koonin, E.V.5
-
58
-
-
84905451755
-
Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery
-
Makarova K.S., Krupovic M., Koonin E.V. Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery. Front Microbiol 2014, 5:354.
-
(2014)
Front Microbiol
, vol.5
, pp. 354
-
-
Makarova, K.S.1
Krupovic, M.2
Koonin, E.V.3
-
59
-
-
84923640664
-
Evolution of adaptive immunity from transposable elements combined with innate immune systems
-
Koonin E.V., Krupovic M. Evolution of adaptive immunity from transposable elements combined with innate immune systems. Nat Rev Genet 2015, 16:184-192.
-
(2015)
Nat Rev Genet
, vol.16
, pp. 184-192
-
-
Koonin, E.V.1
Krupovic, M.2
-
60
-
-
22744445703
-
RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons
-
Kapitonov V.V., Jurka J. RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons. PLoS Biol 2005, 3:e181.
-
(2005)
PLoS Biol
, vol.3
, pp. e181
-
-
Kapitonov, V.V.1
Jurka, J.2
-
61
-
-
84928580279
-
Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon
-
Kapitonov V.V., Koonin E.V. Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon. Biol Direct 2015, 10:20.
-
(2015)
Biol Direct
, vol.10
, pp. 20
-
-
Kapitonov, V.V.1
Koonin, E.V.2
-
62
-
-
66149132301
-
A functional role for transposases in a large eukaryotic genome
-
Nowacki M., Higgins B.P., Maquilan G.M., Swart E.C., Doak T.G., Landweber L.F. A functional role for transposases in a large eukaryotic genome. Science 2009, 324:935-938.
-
(2009)
Science
, vol.324
, pp. 935-938
-
-
Nowacki, M.1
Higgins, B.P.2
Maquilan, G.M.3
Swart, E.C.4
Doak, T.G.5
Landweber, L.F.6
-
63
-
-
84926192226
-
The eukaryotic way to defend and edit genomes by sRNA-targeted DNA deletion
-
Swart E.C., Nowacki M. The eukaryotic way to defend and edit genomes by sRNA-targeted DNA deletion. Ann N Y Acad Sci 2015, 1341:106-114.
-
(2015)
Ann N Y Acad Sci
, vol.1341
, pp. 106-114
-
-
Swart, E.C.1
Nowacki, M.2
|