메뉴 건너뛰기




Volumn 326, Issue , 2016, Pages 152-161

Divide and conquer: Configuring submodels for valid and efficient analyses of complex simulation models

Author keywords

Computational modeling; Design of experiments; Ecological theory; Model analysis; Sensitivity analysis; Validation

Indexed keywords

COMPUTATION THEORY; DESIGN OF EXPERIMENTS; ECOLOGY; HIERARCHICAL SYSTEMS;

EID: 84961179115     PISSN: 03043800     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecolmodel.2015.11.013     Document Type: Article
Times cited : (10)

References (47)
  • 2
    • 84897416698 scopus 로고    scopus 로고
    • Merging validation and evaluation of ecological models to 'evaludation': a review of terminology and a practical approach
    • Augusiak J., Van den Brink P.J., Grimm V. Merging validation and evaluation of ecological models to 'evaludation': a review of terminology and a practical approach. Ecol. Model. 2014, 280:117-128.
    • (2014) Ecol. Model. , vol.280 , pp. 117-128
    • Augusiak, J.1    Den Brink, V.P.J.2    Grimm, V.3
  • 3
    • 84859621622 scopus 로고    scopus 로고
    • Typical pitfalls of simulation modeling: lessons learned from armed forces and business
    • Barth R., Meyer M., Spitzner J. Typical pitfalls of simulation modeling: lessons learned from armed forces and business. J. Artif. Soc. Soc. Simul. 2012, 15(2).
    • (2012) J. Artif. Soc. Soc. Simul. , vol.15 , Issue.2
    • Barth, R.1    Meyer, M.2    Spitzner, J.3
  • 4
    • 84896404046 scopus 로고    scopus 로고
    • BEEHAVE: a systems model of honeybee colony dynamics and foraging to explore multifactorial causes of colony failure
    • Becher M.A., Grimm V., Thorbek P., Horn J., Kennedy P.J., Osborne J.L. BEEHAVE: a systems model of honeybee colony dynamics and foraging to explore multifactorial causes of colony failure. J. Appl. Ecol. 2014, 51(2):470-482.
    • (2014) J. Appl. Ecol. , vol.51 , Issue.2 , pp. 470-482
    • Becher, M.A.1    Grimm, V.2    Thorbek, P.3    Horn, J.4    Kennedy, P.J.5    Osborne, J.L.6
  • 5
    • 0344842337 scopus 로고    scopus 로고
    • Model evaluation and performance
    • John Wiley & Sons, Ltd., Chichester
    • Beck B. Model evaluation and performance. Encyclopedia of Environmetrics 2002, John Wiley & Sons, Ltd., Chichester.
    • (2002) Encyclopedia of Environmetrics
    • Beck, B.1
  • 6
    • 24044459245 scopus 로고    scopus 로고
    • Process level sensitivity analysis for complex ecological models
    • Brugnach M. Process level sensitivity analysis for complex ecological models. Ecol. Model. 2005, 187(2-3):99-120.
    • (2005) Ecol. Model. , vol.187 , Issue.2-3 , pp. 99-120
    • Brugnach, M.1
  • 7
    • 34147165083 scopus 로고    scopus 로고
    • An effective screening design for sensitivity analysis of large models
    • Campolongo F., Cariboni J., Saltelli A. An effective screening design for sensitivity analysis of large models. Environ. Model. Softw. 2007, 22(10):1509-1518.
    • (2007) Environ. Model. Softw. , vol.22 , Issue.10 , pp. 1509-1518
    • Campolongo, F.1    Cariboni, J.2    Saltelli, A.3
  • 8
    • 34047232886 scopus 로고    scopus 로고
    • The role of sensitivity analysis in ecological modelling
    • Cariboni J., Gatelli D., Liska R., Saltelli A. The role of sensitivity analysis in ecological modelling. Ecol. Model. 2007, 203(1):167-182.
    • (2007) Ecol. Model. , vol.203 , Issue.1 , pp. 167-182
    • Cariboni, J.1    Gatelli, D.2    Liska, R.3    Saltelli, A.4
  • 10
    • 30344446670 scopus 로고    scopus 로고
    • Individual-based modeling of ecological and evolutionary processes
    • DeAngelis D.L., Mooij W.M. Individual-based modeling of ecological and evolutionary processes. Ann. Rev. Ecol. Evol. Syst. 2005, 36(1):147-168.
    • (2005) Ann. Rev. Ecol. Evol. Syst. , vol.36 , Issue.1 , pp. 147-168
    • DeAngelis, D.L.1    Mooij, W.M.2
  • 12
    • 84904633257 scopus 로고    scopus 로고
    • The DeAngelis-Beddington functional response and the evolution of timidity of the prey
    • Geritz S.A., Gyllenberg M. The DeAngelis-Beddington functional response and the evolution of timidity of the prey. J. Theor. Biol. 2014, 359:37-44.
    • (2014) J. Theor. Biol. , vol.359 , pp. 37-44
    • Geritz, S.A.1    Gyllenberg, M.2
  • 13
    • 84897914073 scopus 로고    scopus 로고
    • Towards better modelling and decision support: documenting model development, testing, and analysis using TRACE
    • Grimm V., Augusiak J., Focks A., Frank B.M., Gabsi F., Johnston A.S., et al. Towards better modelling and decision support: documenting model development, testing, and analysis using TRACE. Ecol. Model. 2014, 280:129-139.
    • (2014) Ecol. Model. , vol.280 , pp. 129-139
    • Grimm, V.1    Augusiak, J.2    Focks, A.3    Frank, B.M.4    Gabsi, F.5    Johnston, A.S.6
  • 14
    • 84960828015 scopus 로고    scopus 로고
    • Robustness analysis: deconstructing computational models for ecological theory and applications
    • Grimm V., Berger U. Robustness analysis: deconstructing computational models for ecological theory and applications. Ecol. Model. 2016, 326:162-167.
    • (2016) Ecol. Model. , vol.326 , pp. 162-167
    • Grimm, V.1    Berger, U.2
  • 15
    • 33748151495 scopus 로고    scopus 로고
    • A standard protocol for describing individual-based and agent-based models
    • Grimm V., Berger U., Bastiansen F., Eliassen S., Ginot V., Giske J., et al. A standard protocol for describing individual-based and agent-based models. Ecol. Model. 2006, 198(1-2):115-126.
    • (2006) Ecol. Model. , vol.198 , Issue.1-2 , pp. 115-126
    • Grimm, V.1    Berger, U.2    Bastiansen, F.3    Eliassen, S.4    Ginot, V.5    Giske, J.6
  • 18
    • 27744570841 scopus 로고    scopus 로고
    • Pattern-oriented modeling of agent-based complex systems: lessons from ecology
    • Grimm V., Revilla E., Berger U., Jeltsch F., Mooij W.M., Railsback S.F., et al. Pattern-oriented modeling of agent-based complex systems: lessons from ecology. Science 2005, 310(5750):987-991.
    • (2005) Science , vol.310 , Issue.5750 , pp. 987-991
    • Grimm, V.1    Revilla, E.2    Berger, U.3    Jeltsch, F.4    Mooij, W.M.5    Railsback, S.F.6
  • 19
    • 59749087266 scopus 로고
    • Why look under the hood?
    • Cambridge University Press, Cambridge, D.M. Hausman (Ed.)
    • Hausman D.M. Why look under the hood?. The Philosophy of Economics: An Anthology 1995, 217-222. Cambridge University Press, Cambridge. D.M. Hausman (Ed.).
    • (1995) The Philosophy of Economics: An Anthology , pp. 217-222
    • Hausman, D.M.1
  • 20
    • 27744508877 scopus 로고    scopus 로고
    • Stylised facts and the contribution of simulation to the economic analysis of budgeting
    • Heine B.-O., Meyer M., Strangfeld O. Stylised facts and the contribution of simulation to the economic analysis of budgeting. J. Artif. Soc. Soc. Simul. 2005, 8(4).
    • (2005) J. Artif. Soc. Soc. Simul. , vol.8 , Issue.4
    • Heine, B.-O.1    Meyer, M.2    Strangfeld, O.3
  • 21
    • 78649671990 scopus 로고    scopus 로고
    • Systematic module and interface definition using component design structure matrix
    • Helmer R., Yassine A., Meier C. Systematic module and interface definition using component design structure matrix. J. Eng. Design 2010, 21(6):647-675.
    • (2010) J. Eng. Design , vol.21 , Issue.6 , pp. 647-675
    • Helmer, R.1    Yassine, A.2    Meier, C.3
  • 22
    • 0032376126 scopus 로고    scopus 로고
    • Violin plots: a box plot-density trace synergism
    • Hintze J.L., Nelson R.D. Violin plots: a box plot-density trace synergism. Am. Stat. 1998, 52(2):181-184.
    • (1998) Am. Stat. , vol.52 , Issue.2 , pp. 181-184
    • Hintze, J.L.1    Nelson, R.D.2
  • 23
    • 0001164138 scopus 로고
    • New computer models unify ecological theory
    • Huston M., DeAngelis D., Post W. New computer models unify ecological theory. Bioscience 1988, 38(10):682-691.
    • (1988) Bioscience , vol.38 , Issue.10 , pp. 682-691
    • Huston, M.1    DeAngelis, D.2    Post, W.3
  • 24
    • 84892452390 scopus 로고    scopus 로고
    • Pattern-oriented parameterization of general models for ecological application: towards realistic evaluations of management approaches
    • Jakoby O., Grimm V., Frank K. Pattern-oriented parameterization of general models for ecological application: towards realistic evaluations of management approaches. Ecol. Model. 2014, 275:78-88.
    • (2014) Ecol. Model. , vol.275 , pp. 78-88
    • Jakoby, O.1    Grimm, V.2    Frank, K.3
  • 26
    • 84859106451 scopus 로고    scopus 로고
    • Opening the 'black box' of simulations: increased transparency and effective communication through the systematic design of experiments
    • Lorscheid I., Heine B.-O., Meyer M. Opening the 'black box' of simulations: increased transparency and effective communication through the systematic design of experiments. Comput. Math. Org. Theory 2012, 18(1):22-62.
    • (2012) Comput. Math. Org. Theory , vol.18 , Issue.1 , pp. 22-62
    • Lorscheid, I.1    Heine, B.-O.2    Meyer, M.3
  • 27
    • 45449094504 scopus 로고    scopus 로고
    • A methodology for performing global uncertainty and sensitivity analysis in systems biology
    • Marino S., Hogue I.B., Ray C.J., Kirschner D.E. A methodology for performing global uncertainty and sensitivity analysis in systems biology. J. Theor. Biol. 2008, 254(1):178-196.
    • (2008) J. Theor. Biol. , vol.254 , Issue.1 , pp. 178-196
    • Marino, S.1    Hogue, I.B.2    Ray, C.J.3    Kirschner, D.E.4
  • 31
    • 0001147113 scopus 로고
    • Parametric measures of effect size
    • Russell Sage Foundation, New York, H. Cooper, L. Hedges (Eds.)
    • Rosenthal R., Cooper H., Hedges L. Parametric measures of effect size. Handbook of Research Synthesis 1994, 231-244. Russell Sage Foundation, New York. H. Cooper, L. Hedges (Eds.).
    • (1994) Handbook of Research Synthesis , pp. 231-244
    • Rosenthal, R.1    Cooper, H.2    Hedges, L.3
  • 32
    • 0015243940 scopus 로고
    • Paradox of enrichment: destabilization of exploitation ecosystems in ecological time
    • Rosenzweig M.L. Paradox of enrichment: destabilization of exploitation ecosystems in ecological time. Science 1971, 171(3969):385-387.
    • (1971) Science , vol.171 , Issue.3969 , pp. 385-387
    • Rosenzweig, M.L.1
  • 37
    • 84874743490 scopus 로고    scopus 로고
    • Work smarter, not harder: a tutorial on designing and conducting simulation experiments
    • Sanchez S.M., Wan H. Work smarter, not harder: a tutorial on designing and conducting simulation experiments. Proceedings of the 2012 Winter Simulation Conference 2012, 69-82.
    • (2012) Proceedings of the 2012 Winter Simulation Conference , pp. 69-82
    • Sanchez, S.M.1    Wan, H.2
  • 38
    • 77954656798 scopus 로고    scopus 로고
    • Ecological models supporting environmental decision making: a strategy for the future
    • Schmolke A., Thorbek P., DeAngelis D.L., Grimm V. Ecological models supporting environmental decision making: a strategy for the future. Trends Ecol. Evol. 2010, 25(8):479-486.
    • (2010) Trends Ecol. Evol. , vol.25 , Issue.8 , pp. 479-486
    • Schmolke, A.1    Thorbek, P.2    DeAngelis, D.L.3    Grimm, V.4
  • 39
    • 84922554553 scopus 로고    scopus 로고
    • Making predictions in a changing world: the benefits of individual-based ecology
    • Stillman R.A., Railsback S.F., Giske J., Berger U., Grimm V. Making predictions in a changing world: the benefits of individual-based ecology. Bioscience 2015, 65(2):140-150.
    • (2015) Bioscience , vol.65 , Issue.2 , pp. 140-150
    • Stillman, R.A.1    Railsback, S.F.2    Giske, J.3    Berger, U.4    Grimm, V.5
  • 40
    • 84930413710 scopus 로고    scopus 로고
    • Replicating and breaking models: good for you and good for ecology
    • Thiele J.C., Grimm V. Replicating and breaking models: good for you and good for ecology. Oikos 2015, 124(6):691-696.
    • (2015) Oikos , vol.124 , Issue.6 , pp. 691-696
    • Thiele, J.C.1    Grimm, V.2
  • 41
    • 84903731143 scopus 로고    scopus 로고
    • Facilitating parameter estimation and sensitivity analysis of agent-based models: a cookbook using NetLogo and R
    • Thiele J.C., Kurth W., Grimm V. Facilitating parameter estimation and sensitivity analysis of agent-based models: a cookbook using NetLogo and R. J. Artif. Soc. Soc. Simul. 2014, 17(3).
    • (2014) J. Artif. Soc. Soc. Simul. , vol.17 , Issue.3
    • Thiele, J.C.1    Kurth, W.2    Grimm, V.3
  • 42
    • 17644371384 scopus 로고    scopus 로고
    • A strategy to improve the contribution of complex simulation models to ecological theory
    • Van Nes E.H., Scheffer M. A strategy to improve the contribution of complex simulation models to ecological theory. Ecol. Model. 2005, 185(2):153-164.
    • (2005) Ecol. Model. , vol.185 , Issue.2 , pp. 153-164
    • Van Nes, E.H.1    Scheffer, M.2
  • 43
    • 84858673524 scopus 로고    scopus 로고
    • NetLogo Wolf Sheep Predation Model
    • Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL
    • Wilensky U. NetLogo Wolf Sheep Predation Model 1997, Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL.
    • (1997)
    • Wilensky, U.1
  • 44
    • 0141877349 scopus 로고    scopus 로고
    • Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL
    • Wilensky U. NetLogo 1999, Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL.
    • (1999) NetLogo
    • Wilensky, U.1
  • 45
    • 0013425732 scopus 로고    scopus 로고
    • Connected science: learning biology through constructing and testing computational theories - an embodied modeling approach
    • Wilensky U., Reisman K. Connected science: learning biology through constructing and testing computational theories - an embodied modeling approach. Int. J. Complex Syst. 1999, 234:1-12.
    • (1999) Int. J. Complex Syst. , vol.234 , pp. 1-12
    • Wilensky, U.1    Reisman, K.2
  • 46
    • 33744973542 scopus 로고    scopus 로고
    • Thinking like a wolf, a sheep, or a firefly: learning biology through constructing and testing computational theories - an embodied modeling approach
    • Wilensky U., Reisman K. Thinking like a wolf, a sheep, or a firefly: learning biology through constructing and testing computational theories - an embodied modeling approach. Cognit. Instr. 2006, 24(2):171-209.
    • (2006) Cognit. Instr. , vol.24 , Issue.2 , pp. 171-209
    • Wilensky, U.1    Reisman, K.2
  • 47
    • 79958800515 scopus 로고    scopus 로고
    • Experiments: Planning, Analysis, and Optimization
    • John Wiley & Sons, New York
    • Wu C.J., Hamada M.S. Experiments: Planning, Analysis, and Optimization 2011, John Wiley & Sons, New York.
    • (2011)
    • Wu, C.J.1    Hamada, M.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.