Environmental and anthropogenic factors affecting the probability of occurrence of Oncomegas wageneri (Cestoda: Trypanorhyncha) in the southern Gulf of Mexico

Parasites and Vectors

Volumn 8, Issue 1, 2015, Pages

  Vidal Martínez, Víctor M ^a   Torres Irineo, Edgar ^a   Romero, David ^b   Gold Bouchot, Gerardo ^c   Martínez Meyer, Enrique ^b   Valdés Lozano, David ^a   Aguirre Macedo, M Leopoldina ^a  

^a DEPARTAMENTO DE FÍSICA APLICADA   (Mexico)

^b UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO   (Mexico)

^c TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Bioindicators; Cestoda; Contamination; Environmental impact; Flatfish; Gulf of Mexico; Trypanorhyncha

Indexed keywords

NITROGEN; PHOSPHORUS; POLYCYCLIC AROMATIC HYDROCARBON; AROMATIC HYDROCARBON;

ANIMAL TISSUE; ARTICLE; CALIBRATION; CESTODE; CONTROLLED STUDY; ENVIRONMENTAL FACTOR; FLOUNDER; GULF OF MEXICO; MATHEMATICAL MODEL; MEASUREMENT ACCURACY; MOLECULAR WEIGHT; NONHUMAN; ONCOMEGAS WAGENERI; PHYSICAL CHEMISTRY; PREDICTION; PROBABILITY; SEDIMENT; SEWAGE; WATER SAMPLING; ANIMAL; ENVIRONMENT; FISH DISEASES; ISOLATION AND PURIFICATION; PARASITOLOGY; POLLUTION; PREVALENCE; RIVER;

ANIMALS; CESTODA; ENVIRONMENT; ENVIRONMENTAL POLLUTION; FISH DISEASES; FLOUNDER; GEOLOGIC SEDIMENTS; GULF OF MEXICO; HYDROCARBONS, AROMATIC; PREVALENCE; PROBABILITY; RIVERS;

EID: 84960479446     PISSN: None     EISSN: 17563305     Source Type: Journal    
DOI: 10.1186/s13071-015-1222-6     Document Type: Article

References (96)

1. Burge CA, Mark EC, Friedman CS, Froelich B, Hershberger PK, Hofmann EE, et al. Climate change influences on marine infectious diseases: implications for management and society. Annu Rev Mar Sci. 2014;6:249-77.
2. Lafferty KD. Environmental parasitology: what can parasites tell us about human impacts on the environment? Parasitol Today. 1997;13:251-5.
3. Hudson PJ, Lafferty KD, Dobson AP. Parasites and ecological systems: Is a healthy ecosystem an infected one? Trends Ecol Evol. 2006;21:381-5.
4. Vidal-Martínez VM, Pech D, Sures B, Purucker ST, Poulin R. Can parasites really reveal environmental impact? Trends Parasitol. 2010;26:44-51.
5. Holt EA, Miller SW. Bioindicators: using organisms to measure environmental impacts. Nat Educ. 2011;3:8.
6. Borja Á, Muxika I. Guidelines for the use of AMBI (AZTI's Marine Biotic Index) in the assessment of the benthic ecological quality. Mar Pollut Bull. 2005;50:787-9.
7. Diaz RJ, Solan M, Valente RM. A review of approaches for classifying benthic habitats and evaluating habitat quality. J Environ Manage. 2004;73:165-81.
8. Ranasinghe JA, Weisberg SB, Smith RW, Montagne DE, Thompson B, Oakden JM, et al. Calibration and evaluation of five indicators of benthic community condition in two California bay and estuary habitats. Mar Pollut Bull. 2009;59:5-13.
9. Teixeira H, Weisberg SB, Borja Á, Ranasinghe JA, Cadien DB, Velarde RG, et al. Calibration and validation of the AZTI's Marine Biotic Index (AMBI) for Southern California marine bays. Ecol Indic. 2012;12:84e95.
10. Warwick RM. Environmental impact studies on marine communities: pragmatical considerations. Austral J Ecol. 1993;18:63-80.
11. Wright J. Biomonitoring with aquatic benthic macroinvertebrates in southern Costa Rica in support of community based watershed monitoring. Ontario, Canada: MSc Thesis, York University; 2010.
12. Tweedley JR, Warwick RM, Clarke KR, Potter IC. Family-level AMBI is valid for use in the north-eastern Atlantic but not for assessing the health of microtidal Australian estuaries. Estuar Coastal Shelf S. 2014;141:85-96.
13. Kuris A. Hosts as Islands. Am Nat. 1980;116:570-86.
14. Hechinger RF, Lafferty KD, Huspeni TC, Brooks AJ, Kuris AM. Can parasites be indicators of free-living diversity? Relationships between species richness and the abundance of larval trematodes and of local benthos and fishes. Oecologia. 2007;151:82-92.
15. MacKenzie K, Williams HH, Williams B, McVicar AH, Siddall R. Parasites as indicators of water quality and the potential use of helminth transmission in marine pollution studies. Adv Parasit. 1995;35:85-144.
16. Perez-del Olmo A, Raga JA, Kostadinova A, Fernandez M. Parasite communities in Boops boops (L.) (Sparidae) after the Prestige oil-spill: detectable alterations. Mar Poll Bull. 2007;54:266-76.
17. Pérez-del-Olmo A, Fernández M, Raga JA, Kostadinova A, Morand S. Not everything is everywhere: the distance decay of similarity in a marine host- parasite system. J Biogeogr. 2009;36:200-9.
18. Marcogliese DJ. Parasites of the superorganism: Are they indicators of ecosystem health? Int J Parasit. 2005;35:705-16.
19. Anderson TK, Sukhdeo MVK. The relationship between community species richness and the richness of the parasite community in Fundulus heteroclitus. J Parasitol. 2013;99:391-6.
20. Huspeni TC, Lafferty KD. Using larval trematodes that parasitize snails to evaluate a salt-marsh restoration project. Ecol Appl. 2004;14:795-804.
21. Hechinger RF, Lafferty KD, Kuris AM. Trematodes indicate animal biodiversity in the Chilean intertidal and Lake Tanganyika. J Parasitol. 2008;94:966-8.
22. Pech D, Vidal-Martínez VM, Aguirre-Macedo ML, Gold-Bouchot G, Herrera-Silveira JA, Zapata-Pérez O, et al. The checkered puffer (Spheroides testudineus) and its helminths as bioindicators of chemical pollution in Yucatan coastal lagoons. Sci Total Environ. 2009;407:2315-24.
23. Altman I, Byers JE. Large-scale spatial variation in parasite communities influenced by anthropogenic factors. Ecology. 2014;95:1876-87.
24. Elith J, Leathwick J. Conservation prioritization using species distribution models. In: Moilanen A, Wilson KA, Possingham H, editors. Spatial conservation prioritization: quantitative methods and computational tools. Oxford: Oxford University Press; 2009. p. 70-93.
25. Kempf A, Stelzenmüller V, Akimova A, Floeter J. Spatial assessment of predator-prey relationships in the North Sea: the influence of abiotic habitat properties on the spatial overlap between 0-group cod and grey gurnard. Fish Oceanogr. 2013;22:174-92.
26. Thuiller W, Münkemüller T. Habitat suitability modelling. In: Moller AP, Fiedler W, Berthold P, editors. Effects of Climate Change on Birds. Oxford: Oxford University Press; 2005. p. 77-85.
27. Araujo MB, Towsend-Peterson A. Uses and misuses of bioclimatic envelope modeling. Ecology. 2012;93:1527-39.
28. Peterson AT, Ortega-Huerta MA, Bartley J, Sánchez-Cordero V, Soberón J, Buddemeier RH, et al. Future projections for Mexican faunas under global climate change scenarios. Nature. 2002;416:626-9.
29. Zambrano L, Martínez-Meyer E, Menezes N, Peterson AT. Invasive potential of common carp (Cyprinus carpio) and Nile tilapia (Oreochromis niloticus) in American freshwater systems. Can J Fish Aquat Sci. 2006;63:1903-10.
30. Trejo I, Martínez-Meyer E, Calixto-Pérez E, Sánchez-Colón S. Analysis of the effects of climate change on plant communities and mammals in México. Atmósfera. 2011;24:1-14.
31. Elith J, Leathwick J. Species distribution models: ecological explanation and prediction across space and time. Annu Rev Ecol Evol S. 2009;40:677-97.
32. Rombouts I, Beaugranda G, Dauvinb JC. Potential changes in benthic macrofaunal distributions from the English Channel simulated under climate change scenarios. Estuar Coastal Shelf S. 2012;99:153-61.
33. García-Cuellar JA, Arreguín-Sánchez F, Hernández-Vázquez S, Lluch-Cota DB. Impacto ecológico de la industria petrolera en la sonda de Campeche, México, tras tres décadas de actividad: una revisión. Interciencia. 2004;29:311-9.
34. Vidal-Martínez VM, Aguirre-Macedo ML, Del Rio-Rodríguez R, Gold-Bouchot G, Rendón-Von Osten J, Miranda-Rosas G. The pink shrimp Farfantepenaeus duorarum, it symbions and helmints as bioindicators of chemical pollution in Campeche Sound, Mexico. J Helminthol. 2006;80:159-74.
35. Palm H. Untersuchungen zur Systematik von Russelbandwurmern (Cestoda: Trypanorhyncha) aus atlantischen Fischen. Doktortitel. Institute fur Meereskunde an der Christian-Albrechts-Universitat Kiel. 1995.
36. Mattis TE. Development of two tetrarhynchidean cestodes from the northern Gulf of Mexico. Dissertation. University of Southern Mississippi. 1986.
37. Vidal-Martínez VM, Kennedy CR, Aguirre-Macedo ML. The structuring process of the macroparasite community of an experimental population of Cichlasoma urophthalmus through time. J Helminthol. 1998;72:199-208.
38. Hortal J, Borges PAV, Gaspar C. Evaluating the performance of species richness estimators: sensitivity to sample grain size. J Anim Ecol. 2006;75:274-87.
39. Torres-Irineo E, Justin-Amande J, Gaertner D, Delgado De Molina A, Murua H, Chavance P, et al. Bycatch species composition over time by tuna purse seine fishery in the eastern tropical Atlantic Ocean. Biodivers Conserv. 2014;23:1157-73.
40. Gold-Bouchot G, Sima-Alvarez R, Zapata-Pérez O, Güemez-Ricalde J. Histopathological Effects of Petroleum Hydrocarbons and Heavy Metals on the American Oyster (Crassostrea virginica) from Tabasco, Mexico. Mar Poll Bull. 1995;31:439-45.
41. Gold-Bouchot G, Zavala-Coral M, Zapata-Pérez O, Ceja-Moreno V. Hydrocarbon concentrations in oysters (Crassostrea virginica) and recent sediments from three coastal lagoons in Tabasco, Mexico. B Environ Contam Tox. 1997;59:430-7.
42. Strickland JDH, Parsons TR. A practical Handbook of Seawater Analysis, vol. 167. Otawa: Fisheries Research Board of Canada Bulletin; 1972.
43. Comisión Oceanográfica Intergubernamental. Determinacion de los hidrocarburos del petróleo en los sedimentos. Manuales y Guías 11. Paris; 1982.
44. UNEP/FAO/IAEA/IOC. Sampling of selected marine organisms and sample preparation for the analysis of chlorinated hydrocarbons. Reference Methods for Marine Pollution Studies No. 12 Rev. 2. Paris; 1991.
45. FSBI. Fish Welfare. Briefing Paper 2, Fisheries Society of the British Isles, Granta Information Systems, Cambridge: UK; 2002.
46. Suuronen P. Mortality of fish escaping trawls gears. Rome: FAO Fisheries Technical Paper 478; 2005. FAO.
47. Sánchez-Gil P, Arreguín-Sanchez F, García-Abad MC. Ecological Strategies and Recruitment of Syacium gunteri (Pisces: Bothidae) in the southern Gulf of Mexico. Neth J Sea Res. 1994;32:433-9.
48. Mood A. Worse thing happen at sea: the welfare of wild-caught fish. In: Reef Environmental Education Foundation (REEF). 2010. http://fishcount.org. Acceded 29 December, 2014.
49. Scholz T, Aguirre-Macedo ML. Metacercariae of trematodes parasitizing freshwater fish in Mexico: a reappraisal. In: Salgado-Maldonado G, García-Aldrete AN, Vidal-Martínez VM, editors. Metazoan parasites in the Neotropics: ecological, systematic and evolutionary perspective. Commemorative Volume of the 70th Aniversary of the Instituto de Biología, Universidad Nacional Autónoma de México. México DF: Universidad Nacional Autónoma de México; 2000. p. 85-99.
50. Vidal-Martínez VM, Aguirre-Macedo ML, McLaughlin JP, Hechinger RF, Jaramillo AG, Shaw JC, et al. Digenean metacercariae of fishes from the lagoon flats of Palmyra Atoll, Eastern Indo-Pacific. J Helminthol. 2012;86:493-509.
51. Toth LM, Campbell RA, Schmidt GD. A revision of Oncomegas Dollfus, 1929 (Cestoda: Trypanorhyncha; Eutetrarhynchidae), the description of two new species and comments on its classification. Syst Parasitol. 1992;22:167-87.
52. Schaeffner BC, Beveridge I. Description of a new trypanorhynch species (Cestoda) from Indonesian Borneo, with the suppression of Oncomegoides and the erection of a new genus Hispidorhynchus. J Parasitol. 2012;98:408-14.
53. Borcard D, Legendre P, Drapeau P. Partialling out the spatial component of ecological variation. Ecology. 1992;73:1045-55.
54. Borcard D, Legendre P, Avois-Jacquet C, Tuomisto H. Dissecting the spatial structure of ecological data at multiple scales. Ecology. 2004;85:1826-32.
55. Borcard D, Legendre P. All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices. Ecol Model. 2002;153:51-68.
56. Santana-Piñeiros AM, Pech D, Vidal-Martínez VM. Spatial structure of the helminth parasite communities of the tonguefish, Symphurus plagiusa, from the Campeche coast, southern Mexico. Int J Parasitol. 2012;42:911-20.
57. Hofner B, Mayr A, Robinzonov N, Schmid M. Model-based Boosting in R - A hands-on tutorial using the R Package mboost. Comput Stat. 2012;29:3-35.
58. Bühlmann P. Boosting for high dimensional linear models. Ann Stat. 2006;34:559-83.
59. Zuur AF, Ieno EN, Walker NJ, Saveliev AA, Smith GM. Mixed Effects Models and Extensions in Ecology with R. New York: Springer Science + Business Media; 2009.
60. Maloney KO, Schmid M, Weller DE. Applying additive modelling and gradient boosting to assess the effects of watershed and reach characteristics on riverine assemblages. Methods Ecol Evol. 2012;3:116-28.
61. Legendre P. Spatial autocorrelation: trouble or new paradigm? Ecology. 1993;74:1659-73.
62. Kneib T, Hothorn T, Tutz G. Variable selection and model choice in geoadditive regression models. Biometrics. 2009;65:626-34.
63. Hothorn T, Müller J, Schroëder B, Kneib T, Brandl R. Decomposing environmental, spatial, and spatiotemporal components of species distributions. Ecol Monogr. 2011;81:329-47.
64. R Development Core Team. R: A language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing; 2013. http://www.R-project.org. Accessed 21 October 2014.
65. Phillips SJ, Anderson RP, Schapire RE. Maximum entropy modeling of species geographic distributions. Ecol Model. 2006;190:231-59.
66. Merow C, Smith MJ, Silander JA. A practical guide to MaxEnt for modeling species' distributions: what it does, and why inputs and settings matter. Ecography. 2013;36:1058-69.
67. Soberón J, Peterson AT. Interpretation of models of fundamental ecological niches and species' distributional areas. Biodivers Inform. 2005;2:1-10.
68. Lobo JM, Jiménez-Valverde A, Real R. AUC: a misleading measure of the performance of predictive distribution models. Global Ecol Biogeogr. 2008;17:145-51.
69. Barve N, Barve V, Jiménez-Valverde A, Lira-Noriega A, Maher SP, Peterson AT, et al. The crucial role of the accessible area in ecological niche modeling and species distribution modeling. Ecol Model. 2011;222:1810-9.
70. Campbell RA, Haedrich RL, Munroe TA. Parasitism and ecological relationships among deep-sea benthic fishes. Mar Biol. 1980;57:301-13.
71. Bray RA. The bathymetric distribution of the digenean parasites of deep-sea fishes. Folia Parasit. 2004;51:268-74.
72. Ben-David A. Comparison of classification accuracy using Cohen's Weighted Kappa. Expert Sys Appl. 2008;34:825-32.
73. Elith J, Graham HC, Anderson PR, Dudík M, Ferrier S, Guisan A. Novel methods improve prediction of species' distributions from occurrence data. Ecography. 2006;29:129-51.
74. Peterson AT, Papeş, Soberón J. Rethinking receiver operating characteristic analysis applications in ecological niche modeling. Ecol Model. 2008, 213: 63-72.
75. Hosmer DW, Lemeshow S. Applied Logistic Regression. New York: Wiley; 2000.
76. Walter SD. The partial area under the summary ROC curve. Stat Med. 2005;24:2025-40.
77. Liu C, White M, Newell G. Measuring and comparing the accuracy of species distribution models with presence-absence data. Ecography. 2011;34:232-43.
78. Peterson AT. Niche modeling: model evaluation. Biodivers Inform. 2012;8:41.
79. Escobar LE, Peterson AT, Favi M, Yung V, Pons DJ, Medina-Vogel G. Ecology and geography of transmission of two bat-borne rabies lineages in Chile. PLoS Negle Trop Diss. 2013;7:e2577.
80. Barve N. Tool for Partial-ROC. Version 1. 2008. http://kuscholarworks.ku.edu/dspace/handle/1808/ 10059. Accesed 11 July 2014.
81. Robin X, Turck N, Hainard A, Tiberti N, Lisacek F, Sanchez JC, et al. pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics. 2011;12:77.
82. Hijmans RJ, Phillips S, Leathwick J, Elith J. Package 'dismo'. 2011. http://cran.r-project.org/web/packages/dismo/index.html. Accesed: 31 July 2014.
83. Pepe M, Longton G, Janes H. Estimation and comparison of receiver operating characteristic curves. Stata J. 2009;9:1-16.
84. Phillips SJ, Dudík M, Elith J, Graham CH, Lehmann A, Leathwick J, et al. Sample selection bias and presence-only distribution models: implications for background and pseudo-absence data. Ecol Appl. 2009;19:181-97.
85. Centeno-Chalé OA, Aguirre-Macedo ML, Gold-Bouchot G, Vidal-Martínez VM. Effects of oil spill related chemical pollution on helminth parasites in Mexican flounder Cyclopsetta chittendeni from the Campeche Sound, Gulf of Mexico. Ecotox Environ Safe. 2015;119:162-9.
86. Thatcher VE. Studies on the Cestoda of elasmobranch fishes of the northern Gulf of Mexico. Part I. Proc La Acad Sci. 1961;23:65-74.
87. Hasanati M, Savari A, Nikpour Y, Ghanemi K. Assessment of the sources of polycyclic aromatic hydrocarbons in Mousa Inlet by molecular ratios. J Environm Studies. 2011;37:1-3.
88. Ţigənuş D, Coatu V, Lazər L, Oros A, Spînu AD. Identification of the Sources of Polycyclic Aromatic Hydrocarbons in Sediments from the Romanian Black Sea Sector. Cercetəri Marine. 2013;43:187-96.
89. Canadian Council of Ministers of the Environment. Canadian sediment quality guidelines for the protection of aquatic life: Polycyclic aromatic hydrocarbons (PAHs). Winnipeg: Canadian environmental quality guidelines; 2004.
90. Juhasz AL, Naidu R. Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: a review of the microbial degradation of benzo[a]pyrene. Int Biodeter Biodegr. 2000;45:57-88.
91. Revelo-Romo D, Gómez-Perdomo MI, Concha-Obando M, Bravo D, Fernández-Izquierdo P. Characterization of hydrocarbonoclastic marine bacteria using the 16 s rrna gene: a microcosm case study. Dyna. 2013;80:122-9.
92. Singh AK, Sherry A, Gray ND, Jones DM, Bowler BFJ, Head IM. Kinetic parameters for nutrient enhanced crude oil biodegradation in intertidal marine sediments. Front Microbiol. 2014;5:1-13.
93. Atlas R, Bragg J. Bioremediation of marine oil spills: when and when not- the Exxon Valdez experience. Microbiol Technol. 2009;2:213-21.
94. Pietrock M, Marcogliese DJ. Free-living endohelminth stages: at the mercy of environmental conditions. TREPAR. 2003;19:293-9.
95. Le Yen TT, Rijsdijk L, Sures B, Hendriks AJ. Accumulation of persistent organic pollutants in parasites. Chemosphere. 2014;108:145-51.
96. García-Abad MC, Yáñez-Arancibia A, Sánchez-Gil P, Tapia-Garcia M. Distribución, reproducción y alimentación de Syacium gunteri Gingsburg (Pisces: Bothidae), en el Golfo de México. Rev Biol Trop. 1992;39:27-34.