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Volumn 32, Issue 4, 2016, Pages 497-504

Graphical pan-genome analysis with compressed suffix trees and the Burrows-Wheeler transform

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; BIOLOGICAL MODEL; BIOLOGY; COMPUTER SIMULATION; DNA SEQUENCE; GENOMICS; HUMAN; HUMAN GENOME; PROCEDURES;

EID: 84959906110     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv603     Document Type: Article
Times cited : (51)

References (19)
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    • Iqbal, Z. et al. (2012) De novo assembly and genotyping of variants using colored de Bruijn graphs. Nat. Genet., 44, 226-232.
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    • Iqbal, Z.1
  • 10
    • 84916890555 scopus 로고    scopus 로고
    • SplitMEM: A graphical algorithm for pan-genome analysis with suffix skips
    • Marcus, S. et al. (2014) SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips. Bioinformatics, 30, 3476-3483.
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    • Marcus, S.1
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    • Rahn, R. et al. (2014) Journaled string tree - A scalable data structure for analyzing thousands of similar genomes on your laptop. Bioinformatics, 30, 3499-3505.
    • (2014) Bioinformatics , vol.30 , pp. 3499-3505
    • Rahn, R.1
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    • Rasko, D. A. et al. (2008) The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates. J. Bacteriol., 190, 6881-6893.
    • (2008) J. Bacteriol. , vol.190 , pp. 6881-6893
    • Rasko, D.A.1
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    • AlleleSeq: Analysis of allele-specific expression and binding in a network framework
    • Rozowsky, J. et al. (2011) AlleleSeq: analysis of allele-specific expression and binding in a network framework. Mol. Syst. Biol., 7, 522.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.