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Volumn 8214 LNCS, Issue , 2013, Pages 5-16

Space-efficient construction of the Burrows-Wheeler transform

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BACKWARD WAVE TUBES; DATA COMPRESSION; INFORMATION RETRIEVAL;

EID: 84893901024     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-319-02432-5_5     Document Type: Conference Paper
Times cited : (24)

References (19)
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    • Bauer, M.J., Cox, A.J., Rosone, G.: Lightweight algorithms for constructing and inverting the BWT of string collections. Theoretical Computer Science 483, 134-148 (2013)
    • (2013) Theoretical Computer Science , vol.483 , pp. 134-148
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  • 2
    • 84872102147 scopus 로고    scopus 로고
    • Computing the longest common prefix array based on the Burrows-Wheeler transform
    • Beller, T., Gog, S., Ohlebusch, E., Schnattinger, T.: Computing the longest common prefix array based on the Burrows-Wheeler transform. Journal of Discrete Algorithms 18, 22-31 (2013)
    • (2013) Journal of Discrete Algorithms , vol.18 , pp. 22-31
    • Beller, T.1    Gog, S.2    Ohlebusch, E.3    Schnattinger, T.4
  • 8
    • 84942303205 scopus 로고    scopus 로고
    • Lightweight data indexing and compression in external memory
    • Ferragina, P., Gagie, T., Manzini, G.: Lightweight data indexing and compression in external memory. Algorithmica 63(3), 707-730 (2012)
    • (2012) Algorithmica , vol.63 , Issue.3 , pp. 707-730
    • Ferragina, P.1    Gagie, T.2    Manzini, G.3
  • 11
    • 35449006300 scopus 로고    scopus 로고
    • Fast BWT in small space by blockwise suffix sorting
    • Kärkkäinen, J.: Fast BWT in small space by blockwise suffix sorting. Theoretical Computer Science 387(3), 249-257 (2007)
    • (2007) Theoretical Computer Science , vol.387 , Issue.3 , pp. 249-257
    • Kärkkäinen, J.1
  • 13
    • 25644453578 scopus 로고    scopus 로고
    • A space-efficient construction of the Burrows-Wheeler transform for genomic data
    • Lippert, R.A., Mobarry, C.M., Walenz, B.P.: A space-efficient construction of the Burrows-Wheeler transform for genomic data. Journal of Computational Biology 12(7), 943-951 (2005)
    • (2005) Journal of Computational Biology , vol.12 , Issue.7 , pp. 943-951
    • Lippert, R.A.1    Mobarry, C.M.2    Walenz, B.P.3
  • 14
    • 34147186297 scopus 로고    scopus 로고
    • Compressed full-text indexes
    • Navarro, G., Mäkinen, V.: Compressed full-text indexes. ACM Computing Surveys 39(1), Article No. 2 (2007)
    • (2007) ACM Computing Surveys , vol.39 , Issue.1 , pp. 2
    • Navarro, G.1    Mäkinen, V.2
  • 15
    • 70350687851 scopus 로고    scopus 로고
    • Linear suffix array construction by almost pure induced-sorting
    • Nong, G., Zhang, S., Chan, W.: Linear suffix array construction by almost pure induced-sorting. In: Proc. Data Compression Conference, pp. 193-202 (2009)
    • (2009) Proc. Data Compression Conference , pp. 193-202
    • Nong, G.1    Zhang, S.2    Chan, W.3
  • 16
    • 80052633973 scopus 로고    scopus 로고
    • Two efficient algorithms for linear time suffix array construction
    • Nong, G., Zhang, S., Chan, W.: Two efficient algorithms for linear time suffix array construction. IEEE Transactions on Computers 60(10), 1471-1484 (2011)
    • (2011) IEEE Transactions on Computers , vol.60 , Issue.10 , pp. 1471-1484
    • Nong, G.1    Zhang, S.2    Chan, W.3
  • 17
    • 84893957402 scopus 로고    scopus 로고
    • Practical Linear-Time O(1)-Workspace Suffix Sorting for Constant Alphabets
    • to appear, July
    • G. Nong Practical Linear-Time O(1)-Workspace Suffix Sorting for Constant Alphabets. ACM Transactions on Information Systems (to appear, July 2013)
    • (2013) ACM Transactions on Information Systems
    • Nong, G.1
  • 18
    • 70350676784 scopus 로고    scopus 로고
    • A linear-time Burrows-Wheeler transform using induced sorting
    • Karlgren, J., Tarhio, J., Hyyrö, H. (eds.) SPIRE 2009. Springer, Heidelberg
    • Okanohara, D., Sadakane, K.: A linear-time Burrows-Wheeler transform using induced sorting. In: Karlgren, J., Tarhio, J., Hyyrö, H. (eds.) SPIRE 2009. LNCS, vol. 5721, pp. 90-101. Springer, Heidelberg (2009)
    • (2009) LNCS , vol.5721 , pp. 90-101
    • Okanohara, D.1    Sadakane, K.2
  • 19
    • 34147144193 scopus 로고    scopus 로고
    • A taxonomy of suffix array construction algorithms
    • Puglisi, S.J., Smyth, W.F., Turpin, A.: A taxonomy of suffix array construction algorithms. ACM Computing Surveys 39(2), Article No. 4 (2007)
    • (2007) ACM Computing Surveys , vol.39 , Issue.2 , pp. 4
    • Puglisi, S.J.1    Smyth, W.F.2    Turpin, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.