-
1
-
-
84919359797
-
Evolution-guided optimization of biosynthetic pathways
-
Raman S, Rogers JK, Taylor ND, Church GM (2014) Evolution-guided optimization of biosynthetic pathways. Proc Natl Acad Sci USA 111(50):17803-17808.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.50
, pp. 17803-17808
-
-
Raman, S.1
Rogers, J.K.2
Taylor, N.D.3
Church, G.M.4
-
2
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
Wang HH, et al. (2009) Programming cells by multiplex genome engineering and accelerated evolution. Nature 460(7257):894-898.
-
(2009)
Nature
, vol.460
, Issue.7257
, pp. 894-898
-
-
Wang, H.H.1
-
3
-
-
77953642931
-
High-throughput metabolic engineering: Advances in small-molecule screening and selection
-
Dietrich JA, McKee AE, Keasling JD (2010) High-throughput metabolic engineering: Advances in small-molecule screening and selection. Annu Rev Biochem 79:563-590.
-
(2010)
Annu Rev Biochem
, vol.79
, pp. 563-590
-
-
Dietrich, J.A.1
McKee, A.E.2
Keasling, J.D.3
-
4
-
-
84879164975
-
Synthetic RNA devices to expedite the evolution of metaboliteproducing microbes
-
Yang J, et al. (2013) Synthetic RNA devices to expedite the evolution of metaboliteproducing microbes. Nat Commun 4:1413.
-
(2013)
Nat Commun
, vol.4
, pp. 1413
-
-
Yang, J.1
-
5
-
-
84861434998
-
A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level
-
Binder S, et al. (2012) A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level. Genome Biol 13(5):R40.
-
(2012)
Genome Biol
, vol.13
, Issue.5
, pp. R40
-
-
Binder, S.1
-
6
-
-
84875515904
-
Transcription factor-based screens and synthetic selections for microbial small-molecule biosynthesis
-
Dietrich JA, Shis DL, Alikhani A, Keasling JD (2013) Transcription factor-based screens and synthetic selections for microbial small-molecule biosynthesis. ACS Synth Biol 2(1): 47-58.
-
(2013)
ACS Synth Biol
, vol.2
, Issue.1
, pp. 47-58
-
-
Dietrich, J.A.1
Shis, D.L.2
Alikhani, A.3
Keasling, J.D.4
-
7
-
-
84879999713
-
Screening for enhanced triacetic acid lactone production by recombinant Escherichia coli expressing a designed triacetic acid lactone reporter
-
Tang SY, et al. (2013) Screening for enhanced triacetic acid lactone production by recombinant Escherichia coli expressing a designed triacetic acid lactone reporter. J Am Chem Soc 135(27):10099-10103.
-
(2013)
J Am Chem Soc
, vol.135
, Issue.27
, pp. 10099-10103
-
-
Tang, S.Y.1
-
8
-
-
0037007010
-
Directed evolution of the site specificity of Cre recombinase
-
Santoro SW, Schultz PG (2002) Directed evolution of the site specificity of Cre recombinase. Proc Natl Acad Sci USA 99(7):4185-4190.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.7
, pp. 4185-4190
-
-
Santoro, S.W.1
Schultz, P.G.2
-
9
-
-
0036787635
-
An efficient system for the evolution of aminoacyl-tRNA synthetase specificity
-
Santoro SW, Wang L, Herberich B, King DS, Schultz PG (2002) An efficient system for the evolution of aminoacyl-tRNA synthetase specificity. Nat Biotechnol 20(10): 1044-1048.
-
(2002)
Nat Biotechnol
, vol.20
, Issue.10
, pp. 1044-1048
-
-
Santoro, S.W.1
Wang, L.2
Herberich, B.3
King, D.S.4
Schultz, P.G.5
-
10
-
-
0030861452
-
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements
-
Lutz R, Bujard H (1997) Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. Nucleic Acids Res 25(6):1203-1210.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.6
, pp. 1203-1210
-
-
Lutz, R.1
Bujard, H.2
-
11
-
-
84941242926
-
Synthetic biosensors for precise gene control and real-time monitoring of metabolites
-
Rogers JK, et al. (2015) Synthetic biosensors for precise gene control and real-time monitoring of metabolites. Nucleic Acids Res 43(15):7648-7660.
-
(2015)
Nucleic Acids Res
, vol.43
, Issue.15
, pp. 7648-7660
-
-
Rogers, J.K.1
-
13
-
-
84862193202
-
The development and application of a single-cell biosensor for the detection of l-methionine and branched-chain amino acids
-
Mustafi N, Grünberger A, Kohlheyer D, Bott M, Frunzke J (2012) The development and application of a single-cell biosensor for the detection of l-methionine and branched-chain amino acids. Metab Eng 14(4):449-457.
-
(2012)
Metab Eng
, vol.14
, Issue.4
, pp. 449-457
-
-
Mustafi, N.1
Grünberger, A.2
Kohlheyer, D.3
Bott, M.4
Frunzke, J.5
-
14
-
-
84882643588
-
Recent advances in biological production of 3-hydroxypropionic acid
-
Kumar V, Ashok S, Park S (2013) Recent advances in biological production of 3-hydroxypropionic acid. Biotechnol Adv 31(6):945-961.
-
(2013)
Biotechnol Adv
, vol.31
, Issue.6
, pp. 945-961
-
-
Kumar, V.1
Ashok, S.2
Park, S.3
-
16
-
-
0036010273
-
Benzene-free synthesis of adipic acid
-
Niu W, Draths KM, Frost JW (2002) Benzene-free synthesis of adipic acid. Biotechnol Prog 18(2):201-211.
-
(2002)
Biotechnol Prog
, vol.18
, Issue.2
, pp. 201-211
-
-
Niu, W.1
Draths, K.M.2
Frost, J.W.3
-
17
-
-
9144231953
-
2-Methylcitrate-dependent activation of the propionate catabolic operon (prpBCDE) of Salmonella enterica by the PrpR protein
-
Palacios S, Escalante-Semerena JC (2004) 2-Methylcitrate-dependent activation of the propionate catabolic operon (prpBCDE) of Salmonella enterica by the PrpR protein. Microbiology 150(Pt 11):3877-3887.
-
(2004)
Microbiology
, vol.150
, pp. 3877-3887
-
-
Palacios, S.1
Escalante-Semerena, J.C.2
-
18
-
-
32044474425
-
A propionate-inducible expression system for enteric bacteria
-
Lee SK, Keasling JD (2005) A propionate-inducible expression system for enteric bacteria. Appl Environ Microbiol 71(11):6856-6862.
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.11
, pp. 6856-6862
-
-
Lee, S.K.1
Keasling, J.D.2
-
19
-
-
84874798401
-
Expression of the subpathways of the Chloroflexus aurantiacus 3-hydroxypropionate carbon fixation bicycle in E. Coli: Toward horizontal transfer of autotrophic growth
-
Mattozzi Md, Ziesack M, Voges MJ, Silver PA, Way JC (2013) Expression of the subpathways of the Chloroflexus aurantiacus 3-hydroxypropionate carbon fixation bicycle in E. coli: Toward horizontal transfer of autotrophic growth. Metab Eng 16: 130-139.
-
(2013)
Metab Eng
, vol.16
, pp. 130-139
-
-
Md, M.1
Ziesack, M.2
Voges, M.J.3
Silver, P.A.4
Way, J.C.5
-
20
-
-
79251577109
-
Unusual regulation of a leaderless operon involved in the catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides
-
Sullivan MJ, et al. (2011) Unusual regulation of a leaderless operon involved in the catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides. PLoS One 6(1):e15972.
-
(2011)
PLoS One
, vol.6
, Issue.1
, pp. e15972
-
-
Sullivan, M.J.1
-
22
-
-
0037023756
-
2 fixation
-
Alber BE, Fuchs G (2002) Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation. J Biol Chem 277(14):12137-12143.
-
(2002)
J Biol Chem
, vol.277
, Issue.14
, pp. 12137-12143
-
-
Alber, B.E.1
Fuchs, G.2
-
23
-
-
84857449564
-
Production of 3-hydroxypropionic acid via malonyl-CoA pathway using recombinant Escherichia coli strains
-
Rathnasingh C, et al. (2012) Production of 3-hydroxypropionic acid via malonyl-CoA pathway using recombinant Escherichia coli strains. J Biotechnol 157(4):633-640.
-
(2012)
J Biotechnol
, vol.157
, Issue.4
, pp. 633-640
-
-
Rathnasingh, C.1
-
24
-
-
0029045836
-
Regulation of malonyl-CoA metabolism by acyl-acyl carrier protein and beta-ketoacyl-acyl carrier protein synthases in Escherichia coli
-
Heath RJ, Rock CO (1995) Regulation of malonyl-CoA metabolism by acyl-acyl carrier protein and beta-ketoacyl-acyl carrier protein synthases in Escherichia coli. J Biol Chem 270(26):15531-15538.
-
(1995)
J Biol Chem
, vol.270
, Issue.26
, pp. 15531-15538
-
-
Heath, R.J.1
Rock, C.O.2
-
25
-
-
84876676068
-
Recent advances in the metabolic engineering of microorganisms for the production of 3-hydroxypropionic acid as C3 platform chemical
-
Valdehuesa KN, et al. (2013) Recent advances in the metabolic engineering of microorganisms for the production of 3-hydroxypropionic acid as C3 platform chemical. Appl Microbiol Biotechnol 97(8):3309-3321.
-
(2013)
Appl Microbiol Biotechnol
, vol.97
, Issue.8
, pp. 3309-3321
-
-
Valdehuesa, K.N.1
-
27
-
-
16844384950
-
Catabolite repression of the propionate catabolic genes in Escherichia coli and Salmonella enterica: Evidence for involvement of the cyclic AMP receptor protein
-
Lee SK, Newman JD, Keasling JD (2005) Catabolite repression of the propionate catabolic genes in Escherichia coli and Salmonella enterica: Evidence for involvement of the cyclic AMP receptor protein. J Bacteriol 187(8):2793-2800.
-
(2005)
J Bacteriol
, vol.187
, Issue.8
, pp. 2793-2800
-
-
Lee, S.K.1
Newman, J.D.2
Keasling, J.D.3
-
28
-
-
77950863739
-
Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. Coli
-
Moon TS, Dueber JE, Shiue E, Prather KL (2010) Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli. Metab Eng 12(3):298-305.
-
(2010)
Metab Eng
, vol.12
, Issue.3
, pp. 298-305
-
-
Moon, T.S.1
Dueber, J.E.2
Shiue, E.3
Prather, K.L.4
-
29
-
-
59649099262
-
Production of glucaric acid from a synthetic pathway in recombinant Escherichia coli
-
Moon TS, Yoon SH, Lanza AM, Roy-Mayhew JD, Prather KL (2009) Production of glucaric acid from a synthetic pathway in recombinant Escherichia coli. Appl Environ Microbiol 75(3):589-595.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.3
, pp. 589-595
-
-
Moon, T.S.1
Yoon, S.H.2
Lanza, A.M.3
Roy-Mayhew, J.D.4
Prather, K.L.5
-
30
-
-
84891045972
-
Improving D-glucaric acid production from myo-inositol in E. Coli by increasing MIOX stability and myo-inositol transport
-
Shiue E, Prather KL (2014) Improving D-glucaric acid production from myo-inositol in E. coli by increasing MIOX stability and myo-inositol transport. Metab Eng 22:22-31.
-
(2014)
Metab Eng
, vol.22
, pp. 22-31
-
-
Shiue, E.1
Prather, K.L.2
-
31
-
-
0026480409
-
Isolation of a gramicidin S hyperproducing strain of Bacillus brevis by use of a fluorescence activated cell sorting system
-
Azuma T, Harrison GI, Demain AL (1992) Isolation of a gramicidin S hyperproducing strain of Bacillus brevis by use of a fluorescence activated cell sorting system. Appl Microbiol Biotechnol 38(2):173-178.
-
(1992)
Appl Microbiol Biotechnol
, vol.38
, Issue.2
, pp. 173-178
-
-
Azuma, T.1
Harrison, G.I.2
Demain, A.L.3
-
32
-
-
33646542650
-
High-throughput screen for poly- 3-hydroxybutyrate in Escherichia coli and Synechocystis sp. Strain PCC6803
-
Tyo KE, Zhou H, Stephanopoulos GN (2006) High-throughput screen for poly- 3-hydroxybutyrate in Escherichia coli and Synechocystis sp. strain PCC6803. Appl Environ Microbiol 72(5):3412-3417.
-
(2006)
Appl Environ Microbiol
, vol.72
, Issue.5
, pp. 3412-3417
-
-
Tyo, K.E.1
Zhou, H.2
Stephanopoulos, G.N.3
-
33
-
-
49749130062
-
Efficient screening for astaxanthinoverproducing mutants of the yeast Xanthophyllomyces dendrorhous by flow cytometry
-
Ukibe K, Katsuragi T, Tani Y, Takagi H (2008) Efficient screening for astaxanthinoverproducing mutants of the yeast Xanthophyllomyces dendrorhous by flow cytometry. FEMS Microbiol Lett 286(2):241-248.
-
(2008)
FEMS Microbiol Lett
, vol.286
, Issue.2
, pp. 241-248
-
-
Ukibe, K.1
Katsuragi, T.2
Tani, Y.3
Takagi, H.4
-
34
-
-
84903977635
-
Engineering an Acinetobacter regulon for biosensing and high-throughput enzyme screening in E. Coli via flow cytometry
-
Jha RK, Kern TL, Fox DT, M Strauss CE (2014) Engineering an Acinetobacter regulon for biosensing and high-throughput enzyme screening in E. coli via flow cytometry. Nucleic Acids Res 42(12):8150-8160.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.12
, pp. 8150-8160
-
-
Jha, R.K.1
Kern, T.L.2
Fox, D.T.3
Strauss, C.E.M.4
-
35
-
-
84916207914
-
Engineering allostery
-
Raman S, Taylor N, Genuth N, Fields S, Church GM (2014) Engineering allostery. Trends Genet 30(12):521-528.
-
(2014)
Trends Genet
, vol.30
, Issue.12
, pp. 521-528
-
-
Raman, S.1
Taylor, N.2
Genuth, N.3
Fields, S.4
Church, G.M.5
-
36
-
-
84870834865
-
Biosynthesis of cis,cis-muconic acid and its aromatic precursors, catechol and protocatechuic acid, from renewable feedstocks by Saccharomyces cerevisiae
-
Weber C, et al. (2012) Biosynthesis of cis,cis-muconic acid and its aromatic precursors, catechol and protocatechuic acid, from renewable feedstocks by Saccharomyces cerevisiae. Appl Environ Microbiol 78(23):8421-8430.
-
(2012)
Appl Environ Microbiol
, vol.78
, Issue.23
, pp. 8421-8430
-
-
Weber, C.1
-
37
-
-
65549135131
-
Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1
-
Craven SH, et al. (2009) Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1. Mol Microbiol 72(4):881-894.
-
(2009)
Mol Microbiol
, vol.72
, Issue.4
, pp. 881-894
-
-
Craven, S.H.1
-
38
-
-
0028286911
-
Environmentally compatible synthesis of adipic acid from D-glucose
-
Draths KM, Frost JW (1994) Environmentally compatible synthesis of adipic acid from D-glucose. J Am Chem Soc 116(1):399-400.
-
(1994)
J Am Chem Soc
, vol.116
, Issue.1
, pp. 399-400
-
-
Draths, K.M.1
Frost, J.W.2
-
39
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson DG, et al. (2009) Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 6(5):343-345.
-
(2009)
Nat Methods
, vol.6
, Issue.5
, pp. 343-345
-
-
Gibson, D.G.1
-
40
-
-
79951565301
-
Design, construction and characterization of a set of insulated bacterial promoters
-
Davis JH, Rubin AJ, Sauer RT (2011) Design, construction and characterization of a set of insulated bacterial promoters. Nucleic Acids Res 39(3):1131-1141.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.3
, pp. 1131-1141
-
-
Davis, J.H.1
Rubin, A.J.2
Sauer, R.T.3
-
41
-
-
84875720517
-
Precise and reliable gene expression via standard transcription and translation initiation elements
-
Mutalik VK, et al. (2013) Precise and reliable gene expression via standard transcription and translation initiation elements. Nat Methods 10(4):354-360.
-
(2013)
Nat Methods
, vol.10
, Issue.4
, pp. 354-360
-
-
Mutalik, V.K.1
|