-
1
-
-
84880976200
-
Improving photosynthesis
-
Evans, J. R. Improving photosynthesis. Plant Physiol 162, 1780-1793 (2013).
-
(2013)
Plant Physiol
, vol.162
, pp. 1780-1793
-
-
Evans, J.R.1
-
2
-
-
84925879465
-
Meeting the global food demand of the future by engineering crop photosynthesis and yield potential
-
Long, Stephen P., Marshall-Colon, A. & Zhu, X.-G. Meeting the global food demand of the future by engineering crop photosynthesis and yield potential. Cell 161, 56-66 (2015).
-
(2015)
Cell
, vol.161
, pp. 56-66
-
-
Long, S.P.1
Marshall-Colon, A.2
Zhu, X.-G.3
-
3
-
-
77649245472
-
Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape
-
Savir, Y., Noor, E., Milo, R. & Tlusty, T. Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape. Proc Nat Acad Sci 107, 3475-3480 (2010).
-
(2010)
Proc Nat Acad Sci
, vol.107
, pp. 3475-3480
-
-
Savir, Y.1
Noor, E.2
Milo, R.3
Tlusty, T.4
-
4
-
-
33646583168
-
Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized
-
Tcherkez, G. G. B., Farquhar, G. D. & Andrews, T. J. Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized. Proc Nat Acad Sci. 103, 7246-7251 (2006).
-
(2006)
Proc Nat Acad Sci.
, vol.103
, pp. 7246-7251
-
-
Tcherkez, G.G.B.1
Farquhar, G.D.2
Andrews, T.J.3
-
5
-
-
0034914259
-
Form i Rubiscos from non-green algae are expressed abundantly but not assembled in tobacco chloroplasts
-
Whitney, S. M., Baldet, P., Hudson, G. S. & Andrews, T. J. Form I Rubiscos from non-green algae are expressed abundantly but not assembled in tobacco chloroplasts. Plant J 26, 535-547 (2001).
-
(2001)
Plant J
, vol.26
, pp. 535-547
-
-
Whitney, S.M.1
Baldet, P.2
Hudson, G.S.3
Andrews, T.J.4
-
6
-
-
84941023123
-
Structure and mechanism of the Rubisco assembly chaperone Raf1
-
In press
-
Hauser, T. et al. Structure and mechanism of the Rubisco assembly chaperone Raf1. Nat Struct Mol Biol In press (2015).
-
(2015)
Nat Struct Mol Biol
-
-
Hauser, T.1
-
7
-
-
85042810842
-
Role of auxiliary proteins in Rubisco biogenesis and function
-
Hauser, T., Popilka, L., Hartl, F. U. & Hayer-Hartl, M. Role of auxiliary proteins in Rubisco biogenesis and function. Nature Plants 1, 15065 (2015).
-
(2015)
Nature Plants
, vol.1
, pp. 15065
-
-
Hauser, T.1
Popilka, L.2
Hartl, F.U.3
Hayer-Hartl, M.4
-
8
-
-
84925256273
-
Improving recombinant Rubisco biogenesis, plant photosynthesis and growth by coexpressing its ancillary RAF1 chaperone
-
Whitney, S. M., Birch, R., Kelso, C., Beck, J. L. & Kapralov, M. V. Improving recombinant Rubisco biogenesis, plant photosynthesis and growth by coexpressing its ancillary RAF1 chaperone. Proc Nat Acad Sci 112, 3564-3569 (2015).
-
(2015)
Proc Nat Acad Sci
, vol.112
, pp. 3564-3569
-
-
Whitney, S.M.1
Birch, R.2
Kelso, C.3
Beck, J.L.4
Kapralov, M.V.5
-
9
-
-
84959019032
-
Photosynthesis: Getting it together for CO2 fixation
-
Wilson, R. & Whitney, S. Photosynthesis: Getting it together for CO2 fixation. Nature Plants 1, 15130 (2015).
-
(2015)
Nature Plants
, vol.1
, pp. 15130
-
-
Wilson, R.1
Whitney, S.2
-
11
-
-
84928069254
-
Opposing effects of folding and assembly chaperones on evolvability of Rubisco
-
Durao, P. et al. Opposing effects of folding and assembly chaperones on evolvability of Rubisco. Nat Chem Biol 11, 148-155 (2015).
-
(2015)
Nat Chem Biol
, vol.11
, pp. 148-155
-
-
Durao, P.1
-
12
-
-
57849104368
-
Directing the evolution of Rubisco and Rubisco activase: First impressions of a new tool for photosynthesis research
-
Mueller-Cajar, O. & Whitney, S. M. Directing the evolution of Rubisco and Rubisco activase: first impressions of a new tool for photosynthesis research. Photosynth Res 98, 667-75 (2008).
-
(2008)
Photosynth Res
, vol.98
, pp. 667-675
-
-
Mueller-Cajar, O.1
Whitney, S.M.2
-
13
-
-
84875734663
-
Rubisco activity and regulation as targets for crop improvement
-
Parry, M. A. J. et al. Rubisco activity and regulation as targets for crop improvement. J Exp Botany 64, 717-730 (2013).
-
(2013)
J Exp Botany
, vol.64
, pp. 717-730
-
-
Parry, M.A.J.1
-
14
-
-
84931574824
-
Methods for the directed evolution of proteins
-
Packer, M. S. & Liu, D. R. Methods for the directed evolution of proteins. Nat Rev Genet 16, 379-394 (2015).
-
(2015)
Nat Rev Genet
, vol.16
, pp. 379-394
-
-
Packer, M.S.1
Liu, D.R.2
-
15
-
-
80052102623
-
Strategy and success for the directed evolution of enzymes
-
Dalby, P. A. Strategy and success for the directed evolution of enzymes. Cur Opin Struct Biol 21, 473-480 (2011).
-
(2011)
Cur Opin Struct Biol
, vol.21
, pp. 473-480
-
-
Dalby, P.A.1
-
16
-
-
84861440312
-
Systems metabolic engineering of microorganisms for natural and non-natural chemicals
-
Lee, J. W. et al. Systems metabolic engineering of microorganisms for natural and non-natural chemicals. Nat Chem Biol 8, 536-546 (2012).
-
(2012)
Nat Chem Biol
, vol.8
, pp. 536-546
-
-
Lee, J.W.1
-
17
-
-
70450242805
-
Exploring protein fitness landscapes by directed evolution
-
Romero, P. A. & Arnold, F. H. Exploring protein fitness landscapes by directed evolution. Nat Rev Mol Cell Biol 10, 866-876 (2009).
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 866-876
-
-
Romero, P.A.1
Arnold, F.H.2
-
18
-
-
84905385089
-
Structure-function studies with the unique hexameric form II Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris
-
Satagopan, S., Chan, S., Perry, L. J. & Tabita, F. R. Structure-function studies with the unique hexameric form II Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris. J. Biol Chem 289, 21433-21450 (2014).
-
(2014)
J. Biol Chem
, vol.289
, pp. 21433-21450
-
-
Satagopan, S.1
Chan, S.2
Perry, L.J.3
Tabita, F.R.4
-
19
-
-
0041663412
-
Positive and negative selection of mutant forms of prokaryotic (cyanobacterial) Ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Smith, S. A. & Tabita, F. R. Positive and negative selection of mutant forms of prokaryotic (cyanobacterial) Ribulose-1,5-bisphosphate carboxylase/oxygenase. J Mol Biol 331, 557-569 (2003).
-
(2003)
J Mol Biol
, vol.331
, pp. 557-569
-
-
Smith, S.A.1
Tabita, F.R.2
-
20
-
-
37049033685
-
Directed evolution of Rubisco in Escherichia coli reveals a specificity-determining hydrogen bond in the form II enzyme
-
Mueller-Cajar, O., Morell, M. & Whitney, S. M. Directed evolution of Rubisco in Escherichia coli reveals a specificity-determining hydrogen bond in the form II enzyme. Biochem. 46, 14067-74 (2007).
-
(2007)
Biochem.
, vol.46
, pp. 14067-14074
-
-
Mueller-Cajar, O.1
Morell, M.2
Whitney, S.M.3
-
21
-
-
50949090470
-
Evolving improved Synechococcus Rubisco functional expression in Escherichia coli
-
Mueller-Cajar, O. & Whitney, Spencer M. Evolving improved Synechococcus Rubisco functional expression in Escherichia coli. Biochemical Journal 414, 205-214 (2008).
-
(2008)
Biochemical Journal
, vol.414
, pp. 205-214
-
-
Mueller-Cajar, O.1
Whitney, S.M.2
-
22
-
-
84904190583
-
Development of an activity-directed selection system enabled significant improvement of the carboxylation efficiency of Rubisco
-
Cai, Z., Liu, G., Zhang, J. & Li, Y. Development of an activity-directed selection system enabled significant improvement of the carboxylation efficiency of Rubisco. Protein & Cell 5, 552-562 (2014).
-
(2014)
Protein & Cell
, vol.5
, pp. 552-562
-
-
Cai, Z.1
Liu, G.2
Zhang, J.3
Li, Y.4
-
23
-
-
33644980943
-
Directed evolution of Rubisco hypermorphs through genetic selection in engineered E. Coli
-
Parikh, M. R., Greene, D. N., Woods, K. K. & Matsumura, I. Directed evolution of Rubisco hypermorphs through genetic selection in engineered E. coli. Protein Engineering, Design and Selection 19, 113-119 (2006).
-
(2006)
Protein Engineering, Design and Selection
, vol.19
, pp. 113-119
-
-
Parikh, M.R.1
Greene, D.N.2
Woods, K.K.3
Matsumura, I.4
-
24
-
-
34250700987
-
Artificially evolved Synechococcus PCC6301 Rubisco variants exhibit improvements in folding and catalytic efficiency
-
Greene, D. N., Whitney, S. M. & Matsumura, I. Artificially evolved Synechococcus PCC6301 Rubisco variants exhibit improvements in folding and catalytic efficiency. Biochem J 404, 517-24 (2007).
-
(2007)
Biochem J
, vol.404
, pp. 517-524
-
-
Greene, D.N.1
Whitney, S.M.2
Matsumura, I.3
-
25
-
-
84908518403
-
Towards turbocharged photosynthesis
-
Price, G. D. & Howitt, S. M. Towards turbocharged photosynthesis. Nature 513, 497-498 (2014).
-
(2014)
Nature
, vol.513
, pp. 497-498
-
-
Price, G.D.1
Howitt, S.M.2
-
26
-
-
71749090456
-
Substrate-induced assembly of Methanococcoides burtonii D-ribulose-1,5-bisphosphate carboxylase/oxygenase dimers into decamers
-
Alonso, H., Blayney, M. J., Beck, J. L. & Whitney, S. M. Substrate-induced assembly of Methanococcoides burtonii D-ribulose-1,5-bisphosphate carboxylase/oxygenase dimers into decamers. J Biol Chem 284, 33876-82 (2009).
-
(2009)
J Biol Chem
, vol.284
, pp. 33876-33882
-
-
Alonso, H.1
Blayney, M.J.2
Beck, J.L.3
Whitney, S.M.4
-
27
-
-
78649837253
-
Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
-
Nishitani, Y. et al. Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile. J Biol Chem 285, 39339-39347 (2010).
-
(2010)
J Biol Chem
, vol.285
, pp. 39339-39347
-
-
Nishitani, Y.1
-
28
-
-
44649191875
-
Distinct form I, II, III, and IV Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships
-
Tabita, F. R., Satagopan, S., Hanson, T. E., Kreel, N. E. & Scott, S. S. Distinct form I, II, III, and IV Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships. J Exp Bot 59, 1515-1524 (2008).
-
(2008)
J Exp Bot
, vol.59
, pp. 1515-1524
-
-
Tabita, F.R.1
Satagopan, S.2
Hanson, T.E.3
Kreel, N.E.4
Scott, S.S.5
-
29
-
-
84932154977
-
A pentose bisphosphate pathway for nucleoside degradation in Archaea
-
Aono, R., Sato, T., Imanaka, T. & Atomi, H. A pentose bisphosphate pathway for nucleoside degradation in Archaea. Nat Chem Biol 11, 355-360 (2015).
-
(2015)
Nat Chem Biol
, vol.11
, pp. 355-360
-
-
Aono, R.1
Sato, T.2
Imanaka, T.3
Atomi, H.4
-
30
-
-
40749162789
-
The catalytic properties of hybrid Rubisco comprising tobacco small and sunflower large subunits mirror the kinetically equivalent source Rubiscos and can support tobacco growth
-
Sharwood, R., von Caemmerer, S., Maliga, P. & Whitney, S. The catalytic properties of hybrid Rubisco comprising tobacco small and sunflower large subunits mirror the kinetically equivalent source Rubiscos and can support tobacco growth. Plant Physiol 146, 83-96 (2008).
-
(2008)
Plant Physiol
, vol.146
, pp. 83-96
-
-
Sharwood, R.1
Von Caemmerer, S.2
Maliga, P.3
Whitney, S.4
-
31
-
-
44649105841
-
Construction of a tobacco master line to improve Rubisco engineering in chloroplasts
-
Whitney, S. M. & Sharwood, R. E. Construction of a tobacco master line to improve Rubisco engineering in chloroplasts. J Exp Bot 59, 1909-21 (2008).
-
(2008)
J Exp Bot
, vol.59
, pp. 1909-1921
-
-
Whitney, S.M.1
Sharwood, R.E.2
-
32
-
-
80052276565
-
Isoleucine 309 acts as a C4 catalytic switch that increases ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) carboxylation rate in Flaveria
-
Whitney, S. M. et al. Isoleucine 309 acts as a C4 catalytic switch that increases ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) carboxylation rate in Flaveria. Proc Nat Acad Sci 108, 14688-93 (2011).
-
(2011)
Proc Nat Acad Sci
, vol.108
, pp. 14688-14693
-
-
Whitney, S.M.1
-
33
-
-
84925230264
-
Exploiting transplastomically modified Rubisco to rapidly measure natural diversity in its carbon isotope discrimination using tuneable diode laser spectroscopy
-
von Caemmerer, S., Tazoe, Y., Evans, J. R. & Whitney, S. M. Exploiting transplastomically modified Rubisco to rapidly measure natural diversity in its carbon isotope discrimination using tuneable diode laser spectroscopy. J Exp Bot 65, 3759-67 (2014).
-
(2014)
J Exp Bot
, vol.65
, pp. 3759-3767
-
-
Von Caemmerer, S.1
Tazoe, Y.2
Evans, J.R.3
Whitney, S.M.4
-
34
-
-
84961288248
-
Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2
-
Occhialini, A., Lin, M. T., Andralojc, P. J., Hanson, M. R. & Parry, M. A. J. Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2. The Plant Journal 85, 148-160 (2016).
-
(2016)
The Plant Journal
, vol.85
, pp. 148-160
-
-
Occhialini, A.1
Lin, M.T.2
Andralojc, P.J.3
Hanson, M.R.4
Parry, M.A.J.5
-
35
-
-
84865306330
-
Directed enzyme evolution: Beyond the low-hanging fruit
-
Goldsmith, M. & Tawfik, D. S. Directed enzyme evolution: beyond the low-hanging fruit. Curr Opin Struct Biol 22, 406-412 (2012).
-
(2012)
Curr Opin Struct Biol
, vol.22
, pp. 406-412
-
-
Goldsmith, M.1
Tawfik, D.S.2
-
36
-
-
84976590623
-
How mutational epistasis impairs predictability in protein evolution and design
-
n/an/a
-
Miton, C. M. & Tokuriki, N. How mutational epistasis impairs predictability in protein evolution and design. Protein Science, n/an/a (2016).
-
(2016)
Protein Science
-
-
Miton, C.M.1
Tokuriki, N.2
-
37
-
-
48449095514
-
GLUE-IT and PEDEL-AA: New programmes for analyzing protein diversity in randomized libraries
-
Firth, A. E. & Patrick, W. M. GLUE-IT and PEDEL-AA: new programmes for analyzing protein diversity in randomized libraries. Nuc Acids Res 36, 281-285 (2008).
-
(2008)
Nuc Acids Res
, vol.36
, pp. 281-285
-
-
Firth, A.E.1
Patrick, W.M.2
-
38
-
-
33947534842
-
Linked Rubisco subunits can assemble into functional oligomers without impeding catalytic performance
-
Whitney, S. M. & Sharwood, R. E. Linked Rubisco subunits can assemble into functional oligomers without impeding catalytic performance. J Biol Chem 282, 3809-3818 (2007).
-
(2007)
J Biol Chem
, vol.282
, pp. 3809-3818
-
-
Whitney, S.M.1
Sharwood, R.E.2
|