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Volumn 7, Issue 4, 2016, Pages 3857-3872

Signature miRNAs in colorectal cancers were revealed using a bias reduction small RNA deep sequencing protocol

Author keywords

Colorectal cancer; MicroRNA; miR 143; miR 21; Small RNA deep sequencing

Indexed keywords

APC PROTEIN; K RAS PROTEIN; MICRORNA; MICRORNA 10B; MICRORNA 143; MICRORNA 145; MICRORNA 148A; MICRORNA 192; MICRORNA 194; MICRORNA 200B; MICRORNA 200C; MICRORNA 21; MICRORNA 26A; PROTEIN P53; UNCLASSIFIED DRUG; MESSENGER RNA; TUMOR MARKER;

EID: 84957998944     PISSN: None     EISSN: 19492553     Source Type: Journal    
DOI: 10.18632/oncotarget.6460     Document Type: Article
Times cited : (27)

References (40)
  • 2
    • 84890527616 scopus 로고    scopus 로고
    • Fruits and vegetables: updating the epidemiologic evidence for the WCRF/AICR lifestyle recommendations for cancer prevention
    • Norat T, Aune D, Chan D and Romaguera D. Fruits and vegetables: updating the epidemiologic evidence for the WCRF/AICR lifestyle recommendations for cancer prevention. Cancer Treat Res. 2014; 159:35-50.
    • (2014) Cancer Treat Res , vol.159 , pp. 35-50
    • Norat, T.1    Aune, D.2    Chan, D.3    Romaguera, D.4
  • 3
    • 0345818258 scopus 로고    scopus 로고
    • MicroRNAs and cancer
    • McManus MT. MicroRNAs and cancer. Semin Cancer Biol. 2003; 13:253-258.
    • (2003) Semin Cancer Biol , vol.13 , pp. 253-258
    • McManus, M.T.1
  • 6
    • 77949621355 scopus 로고    scopus 로고
    • miRBase: microRNA sequences and annotation
    • Chapter 12 Unit 12, 11-10
    • Griffiths-Jones S. miRBase: microRNA sequences and annotation. Curr Protoc Bioinformatics. 2010; Chapter 12:Unit 12 19 11-10.
    • (2010) Curr Protoc Bioinformatics , vol.19
    • Griffiths-Jones, S.1
  • 7
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004; 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 9
    • 84936776099 scopus 로고    scopus 로고
    • The expression and clinical significance of microRNAs in colorectal cancer detecting
    • Yang X, Zhong J, Ji Y, Li J, Jian Y, Zhang J and Yang W. The expression and clinical significance of microRNAs in colorectal cancer detecting. Tumour Biol. 2015; 36:2675-2684.
    • (2015) Tumour Biol , vol.36 , pp. 2675-2684
    • Yang, X.1    Zhong, J.2    Ji, Y.3    Li, J.4    Jian, Y.5    Zhang, J.6    Yang, W.7
  • 10
    • 84907260904 scopus 로고    scopus 로고
    • MicroRNAs in colorectal cancer: from diagnosis to targeted therapy
    • Orang AV and Barzegari A. MicroRNAs in colorectal cancer: from diagnosis to targeted therapy. Asian Pac J Cancer Prev. 2014; 15:6989-6999.
    • (2014) Asian Pac J Cancer Prev , vol.15 , pp. 6989-6999
    • Orang, A.V.1    Barzegari, A.2
  • 11
    • 81755162782 scopus 로고    scopus 로고
    • A bias-reducing strategy in profiling small RNAs using Solexa
    • Sun G, Wu X, Wang J, Li H, Li X, Gao H, Rossi J and Yen Y. A bias-reducing strategy in profiling small RNAs using Solexa. RNA. 2011; 17:2256-2262.
    • (2011) RNA , vol.17 , pp. 2256-2262
    • Sun, G.1    Wu, X.2    Wang, J.3    Li, H.4    Li, X.5    Gao, H.6    Rossi, J.7    Yen, Y.8
  • 12
    • 84929095115 scopus 로고    scopus 로고
    • Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structure
    • Fuchs RT, Sun Z, Zhuang F and Robb GB. Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structure. PLoS One. 2015; 10:e0126049.
    • (2015) PLoS One , vol.10
    • Fuchs, R.T.1    Sun, Z.2    Zhuang, F.3    Robb, G.B.4
  • 14
    • 84902327813 scopus 로고    scopus 로고
    • Highthroughput sequencing to identify miRNA biomarkers in colorectal cancer patients
    • Sun Y, Wang L, Guo SC, Wu XB and Xu XH. Highthroughput sequencing to identify miRNA biomarkers in colorectal cancer patients. Oncol Lett. 2014; 8:711-713.
    • (2014) Oncol Lett , vol.8 , pp. 711-713
    • Sun, Y.1    Wang, L.2    Guo, S.C.3    Wu, X.B.4    Xu, X.H.5
  • 18
    • 84941261402 scopus 로고    scopus 로고
    • Exosomes: a role for naturally occurring nanovesicles in cancer growth, diagnosis and treatment
    • Srivastava A, Filant J, Moxley KM, Sood A, McMeekin S and Ramesh R. Exosomes: a role for naturally occurring nanovesicles in cancer growth, diagnosis and treatment. Curr Gene Ther. 2015; 15:182-192.
    • (2015) Curr Gene Ther , vol.15 , pp. 182-192
    • Srivastava, A.1    Filant, J.2    Moxley, K.M.3    Sood, A.4    McMeekin, S.5    Ramesh, R.6
  • 19
    • 34547524771 scopus 로고    scopus 로고
    • MicroRNA-21 regulates expression of the PTEN tumor suppressor gene in human hepatocellular cancer
    • Meng F, Henson R, Wehbe-Janek H, Ghoshal K, Jacob ST and Patel T. MicroRNA-21 regulates expression of the PTEN tumor suppressor gene in human hepatocellular cancer. Gastroenterology. 2007; 133:647-658.
    • (2007) Gastroenterology , vol.133 , pp. 647-658
    • Meng, F.1    Henson, R.2    Wehbe-Janek, H.3    Ghoshal, K.4    Jacob, S.T.5    Patel, T.6
  • 20
    • 67649783639 scopus 로고    scopus 로고
    • Expression of miR-21 and its targets (PTEN, PDCD4, TM1) in flat epithelial atypia of the breast in relation to ductal carcinoma in situ and invasive carcinoma
    • Qi L, Bart J, Tan LP, Platteel I, Sluis T, Huitema S, Harms G, Fu L, Hollema H and Berg A. Expression of miR-21 and its targets (PTEN, PDCD4, TM1) in flat epithelial atypia of the breast in relation to ductal carcinoma in situ and invasive carcinoma. BMC Cancer. 2009; 9:163.
    • (2009) BMC Cancer , vol.9 , pp. 163
    • Qi, L.1    Bart, J.2    Tan, L.P.3    Platteel, I.4    Sluis, T.5    Huitema, S.6    Harms, G.7    Fu, L.8    Hollema, H.9    Berg, A.10
  • 22
    • 39049128249 scopus 로고    scopus 로고
    • Altered expression of miR-21, miR-31, miR-143 and miR-145 is related to clinicopathologic features of colorectal cancer
    • Slaby O, Svoboda M, Fabian P, Smerdova T, Knoflickova D, Bednarikova M, Nenutil R and Vyzula R. Altered expression of miR-21, miR-31, miR-143 and miR-145 is related to clinicopathologic features of colorectal cancer. Oncology. 2007; 72:397-402.
    • (2007) Oncology , vol.72 , pp. 397-402
    • Slaby, O.1    Svoboda, M.2    Fabian, P.3    Smerdova, T.4    Knoflickova, D.5    Bednarikova, M.6    Nenutil, R.7    Vyzula, R.8
  • 23
    • 70350433121 scopus 로고    scopus 로고
    • MicroRNA-143 reduces viability and increases sensitivity to 5-fluorouracil in HCT116 human colorectal cancer cells
    • Borralho PM, Kren BT, Castro RE, da Silva IB, Steer CJ and Rodrigues CM. MicroRNA-143 reduces viability and increases sensitivity to 5-fluorouracil in HCT116 human colorectal cancer cells. Febs J. 2009; 276:6689-6700.
    • (2009) Febs J , vol.276 , pp. 6689-6700
    • Borralho, P.M.1    Kren, B.T.2    Castro, R.E.3    da Silva, I.B.4    Steer, C.J.5    Rodrigues, C.M.6
  • 26
    • 65549098881 scopus 로고    scopus 로고
    • Decreased expression of microRNA-143 and-145 in human gastric cancers
    • Takagi T, Iio A, Nakagawa Y, Naoe T, Tanigawa N and Akao Y. Decreased expression of microRNA-143 and-145 in human gastric cancers. Oncology. 2009; 77:12-21.
    • (2009) Oncology , vol.77 , pp. 12-21
    • Takagi, T.1    Iio, A.2    Nakagawa, Y.3    Naoe, T.4    Tanigawa, N.5    Akao, Y.6
  • 27
    • 61349141809 scopus 로고    scopus 로고
    • Clinicopathological significance of microRNA-31,-143 and-145 expression in colorectal cancer
    • Wang CJ, Zhou ZG, Wang L, Yang L, Zhou B, Gu J, Chen HY and Sun XF. Clinicopathological significance of microRNA-31,-143 and-145 expression in colorectal cancer. Dis Markers. 2009; 26:27-34.
    • (2009) Dis Markers , vol.26 , pp. 27-34
    • Wang, C.J.1    Zhou, Z.G.2    Wang, L.3    Yang, L.4    Zhou, B.5    Gu, J.6    Chen, H.Y.7    Sun, X.F.8
  • 29
    • 84903975854 scopus 로고    scopus 로고
    • Lessons from miR-143/145: the importance of cell-type localization of miRNAs
    • Kent OA, McCall MN, Cornish TC and Halushka MK. Lessons from miR-143/145: the importance of cell-type localization of miRNAs. Nucleic Acids Res. 2014; 42:7528-7538.
    • (2014) Nucleic Acids Res , vol.42 , pp. 7528-7538
    • Kent, O.A.1    McCall, M.N.2    Cornish, T.C.3    Halushka, M.K.4
  • 31
    • 84868250570 scopus 로고    scopus 로고
    • Clinical relevance of microRNA miR-21, miR-31, miR-92a, miR-101, miR-106a and miR-145 in colorectal cancer
    • Schee K, Boye K, Abrahamsen TW, Fodstad O and Flatmark K. Clinical relevance of microRNA miR-21, miR-31, miR-92a, miR-101, miR-106a and miR-145 in colorectal cancer. BMC Cancer. 2012; 12:505.
    • (2012) BMC Cancer , vol.12 , pp. 505
    • Schee, K.1    Boye, K.2    Abrahamsen, T.W.3    Fodstad, O.4    Flatmark, K.5
  • 32
    • 84861962639 scopus 로고    scopus 로고
    • Expression of miR-21, miR-31, miR-96 and miR-135b is correlated with the clinical parameters of colorectal cancer
    • Xu XM, Qian JC, Deng ZL, Cai Z, Tang T, Wang P, Zhang KH and Cai JP. Expression of miR-21, miR-31, miR-96 and miR-135b is correlated with the clinical parameters of colorectal cancer. Oncol Lett. 2012; 4:339-345.
    • (2012) Oncol Lett , vol.4 , pp. 339-345
    • Xu, X.M.1    Qian, J.C.2    Deng, Z.L.3    Cai, Z.4    Tang, T.5    Wang, P.6    Zhang, K.H.7    Cai, J.P.8
  • 33
    • 84899891202 scopus 로고    scopus 로고
    • MicroRNA-31 contributes to colorectal cancer development by targeting factor inhibiting HIF-1alpha (FIH-1)
    • Chen T, Yao LQ, Shi Q, Ren Z, Ye LC, Xu JM, Zhou PH and Zhong YS. MicroRNA-31 contributes to colorectal cancer development by targeting factor inhibiting HIF-1alpha (FIH-1). Cancer Biol Ther. 2014; 15:516-523.
    • (2014) Cancer Biol Ther , vol.15 , pp. 516-523
    • Chen, T.1    Yao, L.Q.2    Shi, Q.3    Ren, Z.4    Ye, L.C.5    Xu, J.M.6    Zhou, P.H.7    Zhong, Y.S.8
  • 36
    • 84869008360 scopus 로고    scopus 로고
    • A novel real-time PCR assay of microRNAs using S-Poly(T), a specific oligo(dT) reverse transcription primer with excellent sensitivity and specificity
    • Kang K, Zhang X, Liu H, Wang Z, Zhong J, Huang Z, Peng X, Zeng Y, Wang Y, Yang Y, Luo J and Gou D. A novel real-time PCR assay of microRNAs using S-Poly(T), a specific oligo(dT) reverse transcription primer with excellent sensitivity and specificity. PLoS ONE. 2012; 7:e48536.
    • (2012) PLoS ONE , vol.7
    • Kang, K.1    Zhang, X.2    Liu, H.3    Wang, Z.4    Zhong, J.5    Huang, Z.6    Peng, X.7    Zeng, Y.8    Wang, Y.9    Yang, Y.10    Luo, J.11    Gou, D.12


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.