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Volumn 17, Issue 1, 2016, Pages

De novo transcriptome analyses of host-fungal interactions in oil palm (Elaeis guineensis Jacq.)

Author keywords

[No Author keywords available]

Indexed keywords

ETHYLENE; JASMONIC ACID; REACTIVE OXYGEN METABOLITE; SALICYLIC ACID; TRANSCRIPTOME; CYCLOPENTANE DERIVATIVE; ETHYLENE DERIVATIVE; OXYLIPIN; SALICYLIC ACID DERIVATIVE;

EID: 84957879956     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-016-2368-0     Document Type: Article
Times cited : (76)

References (82)
  • 1
    • 0001261095 scopus 로고
    • Ganoderma - the scourge of oil palms in the coastal areas
    • Singh G. Ganoderma - the scourge of oil palms in the coastal areas. Planter. 1991;67:421-44.
    • (1991) Planter , vol.67 , pp. 421-444
    • Singh, G.1
  • 2
    • 0003561398 scopus 로고
    • Oil Palm Diseases and Disorders
    • Kuala Lumpur: Oxford University Press
    • Turner P. Oil Palm Diseases and Disorders. Kuala Lumpur: Oxford University Press; 1981.
    • (1981)
    • Turner, P.1
  • 3
    • 34548017866 scopus 로고    scopus 로고
    • Ganoderma disease of oil palm-A white rot perspective necessary for integrated control
    • Paterson RRM. Ganoderma disease of oil palm-A white rot perspective necessary for integrated control. Crop Prot. 2007;26:1369-76.
    • (2007) Crop Prot , vol.26 , pp. 1369-1376
    • Paterson, R.R.M.1
  • 4
    • 84887308904 scopus 로고    scopus 로고
    • Management of Ganoderma diseases in oil palm plantations
    • Chung GF. Management of Ganoderma diseases in oil palm plantations. Planter. 2011;87:325-39.
    • (2011) Planter , vol.87 , pp. 325-339
    • Chung, G.F.1
  • 6
    • 17744374920 scopus 로고    scopus 로고
    • Development of Molecular Diagnostics for the Detection of Ganoderma Isolates Pathogenic to Oil Palm
    • Oxfordshire: CABI Publishing
    • Bridge P, Ogrady E, Pilotti C, Sanderson F. Development of Molecular Diagnostics for the Detection of Ganoderma Isolates Pathogenic to Oil Palm. Oxfordshire: CABI Publishing; 2000.
    • (2000)
    • Bridge, P.1    Ogrady, E.2    Pilotti, C.3    Sanderson, F.4
  • 8
    • 0033724806 scopus 로고    scopus 로고
    • Development of diagnostic methods for detecting Ganoderma-infected oil palms
    • Utomo C, Niepold F. Development of diagnostic methods for detecting Ganoderma-infected oil palms. J Phytopathol. 2000;148:507-14.
    • (2000) J Phytopathol , vol.148 , pp. 507-514
    • Utomo, C.1    Niepold, F.2
  • 9
    • 34548589581 scopus 로고    scopus 로고
    • Characterization of parameters for the development of an early screening test for basal stem rot tolerance in oil palm progenies
    • Special is
    • 9 Breton F, Hasan Y, Hariadi S, Lubis Z, de Franqueville H: Characterization of parameters for the development of an early screening test for basal stem rot tolerance in oil palm progenies. J Oil Palm Res 2006, Special is:24-36.
    • (2006) J Oil Palm Res , pp. 24-36
    • Breton, F.1    Hasan, Y.2    Hariadi, S.3    Lubis, Z.4    de Franqueville, H.5
  • 10
    • 17744390826 scopus 로고    scopus 로고
    • A Control Strategy for Basal Stem Rot (Ganoderma) on Oil Palm
    • Wallingford: CABI International
    • Soepena H, Purba R, Pawirosukarto S. A Control Strategy for Basal Stem Rot (Ganoderma) on Oil Palm. Wallingford: CABI International; 2000.
    • (2000)
    • Soepena, H.1    Purba, R.2    Pawirosukarto, S.3
  • 11
    • 56049104698 scopus 로고    scopus 로고
    • Disease suppression in Ganoderma-infected oil palm seedlings treated with Trichoderma harzianum
    • Nur Ain Izzati MZ, Abdullah F. Disease suppression in Ganoderma-infected oil palm seedlings treated with Trichoderma harzianum. Plant Prot Sci. 2008;44:101-7.
    • (2008) Plant Prot Sci , vol.44 , pp. 101-107
    • Nur Ain Izzati, M.Z.1    Abdullah, F.2
  • 12
    • 73949125555 scopus 로고    scopus 로고
    • In vitro studies on the potential Trichoderma harzianum for antagonistic properties against Ganoderma boninense
    • Siddiquee S, Yusuf UK, Hossain K, Jahan S. In vitro studies on the potential Trichoderma harzianum for antagonistic properties against Ganoderma boninense. J Food Agric Env. 2009;7:970-6.
    • (2009) J Food Agric Env , vol.7 , pp. 970-976
    • Siddiquee, S.1    Yusuf, U.K.2    Hossain, K.3    Jahan, S.4
  • 13
    • 80052301538 scopus 로고    scopus 로고
    • Efficacy of single and mixed treatments of Trichoderma harzianum as biocontrol agents of Ganoderma basal stem rot in oil palm
    • Shamala S, Faridah A, Zainal A, Umi K. Efficacy of single and mixed treatments of Trichoderma harzianum as biocontrol agents of Ganoderma basal stem rot in oil palm. J Oil Palm Res. 2008;20:470-83.
    • (2008) J Oil Palm Res , vol.20 , pp. 470-483
    • Shamala, S.1    Faridah, A.2    Zainal, A.3    Umi, K.4
  • 14
    • 17744399805 scopus 로고    scopus 로고
    • Possible sources of genetic resistance in oil palm (Elaeis guineensis Jacq.) to basal stem rot caused by Ganoderma boninense-prospects for future breeding
    • Durand-Gasselin T, Asmady H, Flori A, Jacquemard JC, Hayun Z, Breton F, et al. Possible sources of genetic resistance in oil palm (Elaeis guineensis Jacq.) to basal stem rot caused by Ganoderma boninense-prospects for future breeding. Mycopathologia. 2005;159:93-100.
    • (2005) Mycopathologia , vol.159 , pp. 93-100
    • Durand-Gasselin, T.1    Asmady, H.2    Flori, A.3    Jacquemard, J.C.4    Hayun, Z.5    Breton, F.6
  • 15
    • 34548560030 scopus 로고    scopus 로고
    • Selection for partial resistance in oil palm progenies to Ganoderma basal stem rot
    • Idris A, Kushairi A, Ismail S, Ariffin D. Selection for partial resistance in oil palm progenies to Ganoderma basal stem rot. J Oil Palm Res. 2004;16:12-8.
    • (2004) J Oil Palm Res , vol.16 , pp. 12-18
    • Idris, A.1    Kushairi, A.2    Ismail, S.3    Ariffin, D.4
  • 16
    • 80455164604 scopus 로고    scopus 로고
    • Cloning of transcripts encoding chitinases from Elaeis guineensis Jacq. and their expression profiles in response to fungal infections
    • Naher L, Ho CL, Tan SG, Yusuf UK, Abdullah F. Cloning of transcripts encoding chitinases from Elaeis guineensis Jacq. and their expression profiles in response to fungal infections. Physiol Mol Plant Pathol. 2011;76:96-103.
    • (2011) Physiol Mol Plant Pathol , vol.76 , pp. 96-103
    • Naher, L.1    Ho, C.L.2    Tan, S.G.3    Yusuf, U.K.4    Abdullah, F.5
  • 17
    • 84884138253 scopus 로고    scopus 로고
    • Expression profiles of putative defence-related proteins in oil palm (Elaeis guineensis) colonized by Ganoderma boninense
    • Tan YC, Yeoh KA, Wong MY, Ho CL. Expression profiles of putative defence-related proteins in oil palm (Elaeis guineensis) colonized by Ganoderma boninense. J Plant Physiol. 2013;170:1455-60.
    • (2013) J Plant Physiol , vol.170 , pp. 1455-1460
    • Tan, Y.C.1    Yeoh, K.A.2    Wong, M.Y.3    Ho, C.L.4
  • 18
    • 84866175590 scopus 로고    scopus 로고
    • Sequence analysis and gene expression of putative exo- and endo-glucanases from oil palm (Elaeis guineensis) during fungal infection
    • Yeoh KA, Othman A, Meon S, Abdullah F, Ho CL. Sequence analysis and gene expression of putative exo- and endo-glucanases from oil palm (Elaeis guineensis) during fungal infection. J Plant Physiol. 2012;169:1565-70.
    • (2012) J Plant Physiol , vol.169 , pp. 1565-1570
    • Yeoh, K.A.1    Othman, A.2    Meon, S.3    Abdullah, F.4    Ho, C.L.5
  • 19
    • 84871281993 scopus 로고    scopus 로고
    • Sequence analysis and gene expression of putative oil palm chitinase and chitinase-like proteins in response to colonization of Ganoderma boninense and Trichoderma harzianum
    • Yeoh KA, Othman A, Meon S, Abdullah F, Ho CL. Sequence analysis and gene expression of putative oil palm chitinase and chitinase-like proteins in response to colonization of Ganoderma boninense and Trichoderma harzianum. Mol Biol Rep. 2013;40:147-58.
    • (2013) Mol Biol Rep , vol.40 , pp. 147-158
    • Yeoh, K.A.1    Othman, A.2    Meon, S.3    Abdullah, F.4    Ho, C.L.5
  • 20
    • 79955604857 scopus 로고    scopus 로고
    • Differential expression of oil palm pathology genes during interactions with Ganoderma boninense and Trichoderma harzianum
    • Alizadeh F, Abdullah SNA, Khodavandi A, Abdullah F, Yusuf UK, Chong PP. Differential expression of oil palm pathology genes during interactions with Ganoderma boninense and Trichoderma harzianum. J Plant Physiol. 2011;168:1106-13.
    • (2011) J Plant Physiol , vol.168 , pp. 1106-1113
    • Alizadeh, F.1    Abdullah, S.N.A.2    Khodavandi, A.3    Abdullah, F.4    Yusuf, U.K.5    Chong, P.P.6
  • 21
    • 84875220636 scopus 로고    scopus 로고
    • Transcriptome of oil palm (Elaeis guineensis Jacq.) roots treated with Ganoderma boninense
    • Tee SS, Tan YC, Abdullah F, Ong-Abdullah M, Ho CL. Transcriptome of oil palm (Elaeis guineensis Jacq.) roots treated with Ganoderma boninense. Tree Genet Genomes. 2013;9:377-86.
    • (2013) Tree Genet Genomes , vol.9 , pp. 377-386
    • Tee, S.S.1    Tan, Y.C.2    Abdullah, F.3    Ong-Abdullah, M.4    Ho, C.L.5
  • 22
    • 84922986624 scopus 로고    scopus 로고
    • RNA sequencing of Populus x canadensis roots identifies key molecular mechanisms underlying physiological adaption to excess zinc
    • Ariani A, Di Baccio D, Romeo S, Lombardi L, Andreucci A, Lux A, et al. RNA sequencing of Populus x canadensis roots identifies key molecular mechanisms underlying physiological adaption to excess zinc. PLoS ONE. 2015;10:e0117571.
    • (2015) PLoS ONE , vol.10 , pp. e0117571
    • Ariani, A.1    Baccio, D.2    Romeo, S.3    Lombardi, L.4    Andreucci, A.5    Lux, A.6
  • 24
    • 78650140999 scopus 로고    scopus 로고
    • Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq
    • Huang W, Khatib H. Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq. BMC Genomics. 2010;11:711.
    • (2010) BMC Genomics , vol.11 , pp. 711
    • Huang, W.1    Khatib, H.2
  • 25
    • 84924085728 scopus 로고    scopus 로고
    • Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture
    • Md-Mustafa ND, Khalid N, Gao H, Peng Z, Alimin MF, Bujang N, et al. Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture. BMC Genomics. 2014;15:984.
    • (2014) BMC Genomics , vol.15 , pp. 984
    • Md-Mustafa, N.D.1    Khalid, N.2    Gao, H.3    Peng, Z.4    Alimin, M.F.5    Bujang, N.6
  • 26
    • 84902068589 scopus 로고    scopus 로고
    • Study of seed hair growth in Populus tomentosa, an important character of female floral bud development
    • Ye M, Chen Z, Su X, Ji L, Wang J, Liao W, et al. Study of seed hair growth in Populus tomentosa, an important character of female floral bud development. BMC Genomics. 2014;15:475.
    • (2014) BMC Genomics , vol.15 , pp. 475
    • Ye, M.1    Chen, Z.2    Su, X.3    Ji, L.4    Wang, J.5    Liao, W.6
  • 27
    • 77950545365 scopus 로고    scopus 로고
    • Characterization of transcriptional complexity during berry development in Vitis vinifera using RNA-Seq
    • Zenoni S, Ferrarini A, Giacomelli E, Xumerle L, Fasoli M, Malerba G, et al. Characterization of transcriptional complexity during berry development in Vitis vinifera using RNA-Seq. Plant Physiol. 2010;152:1787-95.
    • (2010) Plant Physiol , vol.152 , pp. 1787-1795
    • Zenoni, S.1    Ferrarini, A.2    Giacomelli, E.3    Xumerle, L.4    Fasoli, M.5    Malerba, G.6
  • 28
    • 84876691731 scopus 로고    scopus 로고
    • Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development
    • Zhang J, Wu K, Zeng S, da Silva JAT, Zhao X, Tian C-E, et al. Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development. BMC Genomics. 2013;14:279.
    • (2013) BMC Genomics , vol.14 , pp. 279
    • Zhang, J.1    Wu, K.2    Zeng, S.3    Silva, J.A.T.4    Zhao, X.5    Tian, C.-E.6
  • 29
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • Anders S, Huber W. Differential expression analysis for sequence count data. Genome Biol. 2010;11:R106.
    • (2010) Genome Biol , vol.11 , pp. R106
    • Anders, S.1    Huber, W.2
  • 30
    • 53549113354 scopus 로고    scopus 로고
    • Reprogramming a maize plant: Transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis
    • Doehlemann G, Wahl R, Horst RJ, Voll LM, Usadel B, Poree F, et al. Reprogramming a maize plant: Transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis. Plant J. 2008;56:181-95.
    • (2008) Plant J , vol.56 , pp. 181-195
    • Doehlemann, G.1    Wahl, R.2    Horst, R.J.3    Voll, L.M.4    Usadel, B.5    Poree, F.6
  • 32
    • 0035859020 scopus 로고    scopus 로고
    • Plant pathogens and integrated defence responses to infection
    • Dangl JL, Jones JD. Plant pathogens and integrated defence responses to infection. Nature. 2001;411:826-33.
    • (2001) Nature , vol.411 , pp. 826-833
    • Dangl, J.L.1    Jones, J.D.2
  • 33
    • 55249112522 scopus 로고    scopus 로고
    • RLM3, a TIR domain encoding gene involved in broad-range immunity of Arabidopsis to necrotrophic fungal pathogens
    • Staal J, Kaliff M, Dewaele E, Persson M, Dixelius C. RLM3, a TIR domain encoding gene involved in broad-range immunity of Arabidopsis to necrotrophic fungal pathogens. Plant J. 2008;55:188-200.
    • (2008) Plant J , vol.55 , pp. 188-200
    • Staal, J.1    Kaliff, M.2    Dewaele, E.3    Persson, M.4    Dixelius, C.5
  • 35
    • 0036483542 scopus 로고    scopus 로고
    • A critical role for ethylene in hydrogen peroxide release during programmed cell death in tomato suspension cells
    • De-Jong AJ, Yakimova ET, Kapchina VM, Woltering EJ. A critical role for ethylene in hydrogen peroxide release during programmed cell death in tomato suspension cells. Planta. 2002;214:537-45.
    • (2002) Planta , vol.214 , pp. 537-545
    • De-Jong, A.J.1    Yakimova, E.T.2    Kapchina, V.M.3    Woltering, E.J.4
  • 36
    • 0002262342 scopus 로고
    • Volatile products of the lipoxygenase pathway Evolved from Phaseolus vulgaris (L.) leaves inoculated with Pseudomonas syringae pv phaseolicola
    • Croft K, Juttner F, Slusarenko AJ. Volatile products of the lipoxygenase pathway Evolved from Phaseolus vulgaris (L.) leaves inoculated with Pseudomonas syringae pv phaseolicola. Plant Physiol. 1993;101:13-24.
    • (1993) Plant Physiol , vol.101 , pp. 13-24
    • Croft, K.1    Juttner, F.2    Slusarenko, A.J.3
  • 37
    • 0036670233 scopus 로고    scopus 로고
    • The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis
    • Xu L, Liu F, Lechner E, Genschik P, Crosby WL, Ma H, et al. The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell. 2002;14:1919-35.
    • (2002) Plant Cell , vol.14 , pp. 1919-1935
    • Xu, L.1    Liu, F.2    Lechner, E.3    Genschik, P.4    Crosby, W.L.5    Ma, H.6
  • 38
    • 0032524404 scopus 로고    scopus 로고
    • COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility
    • Xie DX, Feys BF, James S, Nieto-Rostro M, Turner JG. COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility. Science. 1998;280:1091-4.
    • (1998) Science , vol.280 , pp. 1091-1094
    • Xie, D.X.1    Feys, B.F.2    James, S.3    Nieto-Rostro, M.4    Turner, J.G.5
  • 39
    • 0034307755 scopus 로고    scopus 로고
    • Interplay of signaling pathways in plant disease resistance
    • Feys BJ, Parker JE. Interplay of signaling pathways in plant disease resistance. Trends Genet. 2000;16:449-55.
    • (2000) Trends Genet , vol.16 , pp. 449-455
    • Feys, B.J.1    Parker, J.E.2
  • 40
    • 0036274678 scopus 로고    scopus 로고
    • Ethylene biosynthesis and signaling networks
    • Wang KL, Li H, Ecker JR. Ethylene biosynthesis and signaling networks. Plant Cell. 2002;14:S131-51.
    • (2002) Plant Cell , vol.14 , pp. S131-S151
    • Wang, K.L.1    Li, H.2    Ecker, J.R.3
  • 41
    • 8444244952 scopus 로고    scopus 로고
    • The BOS loci of Arabidopsis are required for resistance to Botrytis cinerea infection
    • Veronese P, Chen X, Bluhm B, Salmeron J, Dietrich R, Mengiste T. The BOS loci of Arabidopsis are required for resistance to Botrytis cinerea infection. Plant J. 2004;40:558-74.
    • (2004) Plant J , vol.40 , pp. 558-574
    • Veronese, P.1    Chen, X.2    Bluhm, B.3    Salmeron, J.4    Dietrich, R.5    Mengiste, T.6
  • 42
    • 33645743833 scopus 로고    scopus 로고
    • The membrane-anchored BOTRYTIS-INDUCED KINASE1 plays distinct roles in Arabidopsis resistance to necrotrophic and biotrophic pathogens
    • Veronese P, Nakagami H, Bluhm B, Abuqamar S, Chen X, Salmeron J, et al. The membrane-anchored BOTRYTIS-INDUCED KINASE1 plays distinct roles in Arabidopsis resistance to necrotrophic and biotrophic pathogens. Plant Cell. 2006;18:257-73.
    • (2006) Plant Cell , vol.18 , pp. 257-273
    • Veronese, P.1    Nakagami, H.2    Bluhm, B.3    Abuqamar, S.4    Chen, X.5    Salmeron, J.6
  • 43
    • 0036728244 scopus 로고    scopus 로고
    • Oxidative stress, antioxidants and stress tolerance
    • Mittler R. Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci. 2002;7:405-10.
    • (2002) Trends Plant Sci , vol.7 , pp. 405-410
    • Mittler, R.1
  • 44
    • 78650620821 scopus 로고    scopus 로고
    • Rice hypersensitive induced reaction protein 1 (OsHIR1) associates with plasma membrane and triggers hypersensitive cell death
    • Zhou L, Cheung M-Y, Li M-W, Fu Y, Sun Z, Sun S-M, et al. Rice hypersensitive induced reaction protein 1 (OsHIR1) associates with plasma membrane and triggers hypersensitive cell death. BMC Plant Biol. 2010;10:290.
    • (2010) BMC Plant Biol , vol.10 , pp. 290
    • Zhou, L.1    Cheung, M.-Y.2    Li, M.-W.3    Fu, Y.4    Sun, Z.5    Sun, S.-M.6
  • 45
    • 0030266346 scopus 로고    scopus 로고
    • Resistance gene-dependent plant defense responses
    • Hammond-Kosack KE, Jones JD. Resistance gene-dependent plant defense responses. Plant Cell. 1996;8:1773-91.
    • (1996) Plant Cell , vol.8 , pp. 1773-1791
    • Hammond-Kosack, K.E.1    Jones, J.D.2
  • 46
    • 34249789268 scopus 로고    scopus 로고
    • Overexpression of pectin methylesterase inhibitors in Arabidopsis restricts fungal infection by Botrytis cinerea
    • Lionetti V, Raiola A, Camardella L, Giovane A, Obel N, Pauly M, et al. Overexpression of pectin methylesterase inhibitors in Arabidopsis restricts fungal infection by Botrytis cinerea. Plant Physiol. 2007;143:1871-80.
    • (2007) Plant Physiol , vol.143 , pp. 1871-1880
    • Lionetti, V.1    Raiola, A.2    Camardella, L.3    Giovane, A.4    Obel, N.5    Pauly, M.6
  • 47
    • 39049172816 scopus 로고    scopus 로고
    • Effect of the carbon source and inoculum preparation method on laccase and manganese peroxidase production in submerged cultivation by the medicinal mushroom Ganoderma lucidum (W Curt: Fr) P Karst (Aphyllophoromycetideae)
    • Songulashvili G, Elisashvili V, Wasser S, Hadar Y, Nevo E. Effect of the carbon source and inoculum preparation method on laccase and manganese peroxidase production in submerged cultivation by the medicinal mushroom Ganoderma lucidum (W Curt: Fr) P Karst (Aphyllophoromycetideae). Int J Med Mushrooms. 2008;10:79-86.
    • (2008) Int J Med Mushrooms , vol.10 , pp. 79-86
    • Songulashvili, G.1    Elisashvili, V.2    Wasser, S.3    Hadar, Y.4    Nevo, E.5
  • 48
    • 4344641271 scopus 로고    scopus 로고
    • A rice isoflavone reductase-like gene, OsIRL, is induced by rice blast fungal elicitor
    • Kim ST, Cho KS, Kim SG, Kang SY, Kang KY. A rice isoflavone reductase-like gene, OsIRL, is induced by rice blast fungal elicitor. Mol Cells. 2003;16:224-31.
    • (2003) Mol Cells , vol.16 , pp. 224-231
    • Kim, S.T.1    Cho, K.S.2    Kim, S.G.3    Kang, S.Y.4    Kang, K.Y.5
  • 49
    • 84900391000 scopus 로고    scopus 로고
    • Multi-platform metabolomic analyses of ergosterol-induced dynamic changes in Nicotiana tabacum cells
    • Tugizimana F, Steenkamp PA, Piater LA, Dubery IA. Multi-platform metabolomic analyses of ergosterol-induced dynamic changes in Nicotiana tabacum cells. PLoS One. 2014;9:e87846.
    • (2014) PLoS One , vol.9 , pp. e87846
    • Tugizimana, F.1    Steenkamp, P.A.2    Piater, L.A.3    Dubery, I.A.4
  • 51
    • 84908547652 scopus 로고    scopus 로고
    • Copper radical oxidases and related extracellular oxidoreductases of wood-decay Agaricomycetes
    • Kersten P, Cullen D. Copper radical oxidases and related extracellular oxidoreductases of wood-decay Agaricomycetes. Fungal Genet Biol. 2014;72:124-30.
    • (2014) Fungal Genet Biol , vol.72 , pp. 124-130
    • Kersten, P.1    Cullen, D.2
  • 52
    • 33748580320 scopus 로고    scopus 로고
    • Ergosterol treatment leads to the expression of a specific set of defence-related genes in tobacco
    • Lochman J, Mikes V. Ergosterol treatment leads to the expression of a specific set of defence-related genes in tobacco. Plant Mol Biol. 2006;62:43-51.
    • (2006) Plant Mol Biol , vol.62 , pp. 43-51
    • Lochman, J.1    Mikes, V.2
  • 56
    • 0032985173 scopus 로고    scopus 로고
    • Induction of defense responses in cucumber plants (Cucumis sativus L.) by the biocontrol agent Trichoderma harzianum
    • Yedidia I, Benhamou N, Chet I. Induction of defense responses in cucumber plants (Cucumis sativus L.) by the biocontrol agent Trichoderma harzianum. Appl Environ Microbiol. 1999;65:1061-70.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 1061-1070
    • Yedidia, I.1    Benhamou, N.2    Chet, I.3
  • 57
    • 0033662534 scopus 로고    scopus 로고
    • Induction and accumulation of PR proteins activity during early stages of root colonization by the mycoparasite Trichoderma harzianum strain T-203
    • Yedidia I, Benhamou N, Kapulnik Y, Chet I. Induction and accumulation of PR proteins activity during early stages of root colonization by the mycoparasite Trichoderma harzianum strain T-203. Plant Physiol Biochem. 2000;38:863-73.
    • (2000) Plant Physiol Biochem , vol.38 , pp. 863-873
    • Yedidia, I.1    Benhamou, N.2    Kapulnik, Y.3    Chet, I.4
  • 58
    • 34147143464 scopus 로고    scopus 로고
    • Microscopic and transcriptome analyses of early colonization of tomato roots by Trichoderma harzianum
    • Chacón MR, Rodríguez-Galán O, Benítez T, Sousa S, Rey M, Llobell A, et al. Microscopic and transcriptome analyses of early colonization of tomato roots by Trichoderma harzianum. Int Microbiol. 2007;10:19-27.
    • (2007) Int Microbiol , vol.10 , pp. 19-27
    • Chacón, M.R.1    Rodríguez-Galán, O.2    Benítez, T.3    Sousa, S.4    Rey, M.5    Llobell, A.6
  • 59
    • 80053609553 scopus 로고    scopus 로고
    • Trichoderma-induced plant immunity likely involves both hormonal- and camalexin-dependent mechanisms in Arabidopsis thaliana and confers resistance against necrotrophic fungi Botrytis cinerea
    • Contreras-Cornejo HA, Macías-Rodríguez L, Beltrán-Peña E, Herrera-Estrella A, López-Bucio J. Trichoderma-induced plant immunity likely involves both hormonal- and camalexin-dependent mechanisms in Arabidopsis thaliana and confers resistance against necrotrophic fungi Botrytis cinerea. Plant Signal Behav. 2011;6:1554-63.
    • (2011) Plant Signal Behav , vol.6 , pp. 1554-1563
    • Contreras-Cornejo, H.A.1    Macías-Rodríguez, L.2    Beltrán-Peña, E.3    Herrera-Estrella, A.4    López-Bucio, J.5
  • 60
    • 80051798243 scopus 로고    scopus 로고
    • Colonization of Arabidopsis roots by Trichoderma atroviride promotes growth and enhances systemic disease resistance through jasmonic acid/ethylene and salicylic acid pathways
    • Salas-Marina MA, Silva-Flores MA, Uresti-Rivera EE, Castro-Longoria E, Herrera-Estrella A, Casas-Flores S. Colonization of Arabidopsis roots by Trichoderma atroviride promotes growth and enhances systemic disease resistance through jasmonic acid/ethylene and salicylic acid pathways. Eur J Plant Pathol. 2011;131:15-26.
    • (2011) Eur J Plant Pathol , vol.131 , pp. 15-26
    • Salas-Marina, M.A.1    Silva-Flores, M.A.2    Uresti-Rivera, E.E.3    Castro-Longoria, E.4    Herrera-Estrella, A.5    Casas-Flores, S.6
  • 62
    • 84857550715 scopus 로고    scopus 로고
    • Ergosterol-induced sesquiterpenoid synthesis in tobacco cells
    • Tugizimana F, Steenkamp PA, Piater LA, Dubery IA. Ergosterol-induced sesquiterpenoid synthesis in tobacco cells. Molecules. 2012;17:1698-715.
    • (2012) Molecules , vol.17 , pp. 1698-1715
    • Tugizimana, F.1    Steenkamp, P.A.2    Piater, L.A.3    Dubery, I.A.4
  • 63
    • 0030922695 scopus 로고    scopus 로고
    • DAD1, the defender against apoptotic cell death, is a subunit of the mammalian oligosaccharyltransferase
    • Kelleher DJ, Gilmore R. DAD1, the defender against apoptotic cell death, is a subunit of the mammalian oligosaccharyltransferase. Proc Natl Acad Sci U S A. 1997;94:4994-9.
    • (1997) Proc Natl Acad Sci U S A , vol.94 , pp. 4994-4999
    • Kelleher, D.J.1    Gilmore, R.2
  • 64
    • 1942536006 scopus 로고    scopus 로고
    • Elicitors of plant defense responses from biocontrol strains of Trichoderma viren
    • Hanson LE, Howell CR. Elicitors of plant defense responses from biocontrol strains of Trichoderma viren. Phytopathology. 2004;94:171-6.
    • (2004) Phytopathology , vol.94 , pp. 171-176
    • Hanson, L.E.1    Howell, C.R.2
  • 65
    • 33746225243 scopus 로고    scopus 로고
    • Sm1, a proteinaceous elicitor secreted by the biocontrol fungus Trichoderma virens induces plant defense responses and systemic resistance
    • Djonović S, Pozo MJ, Dangott LJ, Howell CR, Kenerley CM. Sm1, a proteinaceous elicitor secreted by the biocontrol fungus Trichoderma virens induces plant defense responses and systemic resistance. Mol Plant Microbe Interact. 2006;19:838-53.
    • (2006) Mol Plant Microbe Interact , vol.19 , pp. 838-853
    • Djonović, S.1    Pozo, M.J.2    Dangott, L.J.3    Howell, C.R.4    Kenerley, C.M.5
  • 66
    • 36249003456 scopus 로고    scopus 로고
    • A proteinaceous elicitor Sm1 from the beneficial fungus Trichoderma virens is required for induced systemic resistance in maize
    • Djonovic S, Vargas WA, Kolomiets MV, Horndeski M, Wiest A, Kenerley CM. A proteinaceous elicitor Sm1 from the beneficial fungus Trichoderma virens is required for induced systemic resistance in maize. Plant Physiol. 2007;145:875-89.
    • (2007) Plant Physiol , vol.145 , pp. 875-889
    • Djonovic, S.1    Vargas, W.A.2    Kolomiets, M.V.3    Horndeski, M.4    Wiest, A.5    Kenerley, C.M.6
  • 67
    • 35248879647 scopus 로고    scopus 로고
    • The 18mer peptaibols from Trichoderma virens elicit plant defence responses
    • Viterbo A, Wiest A, Brotman Y, Chet I, Kenerley C. The 18mer peptaibols from Trichoderma virens elicit plant defence responses. Mol Plant Pathol. 2007;8:737-46.
    • (2007) Mol Plant Pathol , vol.8 , pp. 737-746
    • Viterbo, A.1    Wiest, A.2    Brotman, Y.3    Chet, I.4    Kenerley, C.5
  • 69
    • 20944447661 scopus 로고    scopus 로고
    • Isolation of RNA of high quality and yield from Ginkgo biloba leaves
    • Wang T, Zhang N, Du L. Isolation of RNA of high quality and yield from Ginkgo biloba leaves. Biotechnol Lett. 2005;27:629-33.
    • (2005) Biotechnol Lett , vol.27 , pp. 629-633
    • Wang, T.1    Zhang, N.2    Du, L.3
  • 70
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino DR, Birney E. Velvet: Algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 2008;18:821-9.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 71
    • 84859768479 scopus 로고    scopus 로고
    • Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels
    • Schulz MH, Zerbino DR, Vingron M, Birney E. Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics. 2012;28:1086-92.
    • (2012) Bioinformatics , vol.28 , pp. 1086-1092
    • Schulz, M.H.1    Zerbino, D.R.2    Vingron, M.3    Birney, E.4
  • 72
    • 0037460985 scopus 로고    scopus 로고
    • TIGR gene indices clustering tools (TGICL): A software system for fast clustering of large EST datasets
    • Pertea G, Huang X, Liang F, Antonescu V, Sultana R, Karamycheva S, et al. TIGR gene indices clustering tools (TGICL): A software system for fast clustering of large EST datasets. Bioinformatics. 2003;19:651-2.
    • (2003) Bioinformatics , vol.19 , pp. 651-652
    • Pertea, G.1    Huang, X.2    Liang, F.3    Antonescu, V.4    Sultana, R.5    Karamycheva, S.6
  • 73
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • Huang X, Madan A. CAP3: A DNA sequence assembly program. Genome Res. 1999;9:868-77.
    • (1999) Genome Res , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 75
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M. Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics. 2005;21:3674-6.
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Götz, S.2    García-Gómez, J.M.3    Terol, J.4    Talón, M.5    Robles, M.6
  • 76
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL. TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics. 2009;25:1105-11.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 77
    • 12144291195 scopus 로고    scopus 로고
    • MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
    • Thimm O, Blaesing O, Gibon Y, Nagel A, Meyer S, Krüger P, et al. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J. 2004;37:914-39.
    • (2004) Plant J , vol.37 , pp. 914-939
    • Thimm, O.1    Blaesing, O.2    Gibon, Y.3    Nagel, A.4    Meyer, S.5    Krüger, P.6
  • 78
    • 84969423696 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B. 1995;57:289-300.
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 79
    • 79960610118 scopus 로고    scopus 로고
    • Revigo summarizes and visualizes long lists of gene ontology terms
    • Supek F, Bošnjak M, Škunca N, Šmuc T. Revigo summarizes and visualizes long lists of gene ontology terms. PLoS One. 2011;6:e21800.
    • (2011) PLoS One , vol.6 , pp. e21800
    • Supek, F.1    Bošnjak, M.2    Škunca, N.3    Šmuc, T.4
  • 81
    • 0002129975 scopus 로고    scopus 로고
    • Quantification on the light cycler
    • In: Meuer S, Wittwer C, Nakagawara K, editors. Rapid Cycle Real-time PCR Methods Appl. Heidelberg: Springer Press
    • Rasmussen R. Quantification on the light cycler. In: Meuer S, Wittwer C, Nakagawara K, editors. Rapid Cycle Real-time PCR Methods Appl. Heidelberg: Springer Press; 2001. p. 21-34.
    • (2001) , pp. 21-34
    • Rasmussen, R.1
  • 82
    • 45449087921 scopus 로고    scopus 로고
    • qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
    • Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol. 2007;8:R19.
    • (2007) Genome Biol , vol.8 , pp. R19
    • Hellemans, J.1    Mortier, G.2    Paepe, A.3    Speleman, F.4    Vandesompele, J.5


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