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Volumn 61, Issue 3, 2016, Pages 352-363

A 3' UTR-Derived Small RNA Provides the Regulatory Noncoding Arm of the Inner Membrane Stress Response

Author keywords

3'UTR; Cpx pathway; CpxP; CpxQ; Envelope stress; Hfq; Membrane potential; NhaB; Noncoding RNA; RNase E

Indexed keywords

CHAPERONE; MESSENGER RNA; PROTEIN CPX; PROTEIN CPXP; RIBONUCLEASE E; RNA; SMALL RNA; UNCLASSIFIED DRUG; 3' UNTRANSLATED REGION; BACTERIAL PROTEIN; BACTERIAL RNA; CPXP PROTEIN, BACTERIA; MEMBRANE PROTEIN; RIBONUCLEASE; SMALL UNTRANSLATED RNA;

EID: 84957427381     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2015.12.023     Document Type: Article
Times cited : (143)

References (71)
  • 1
    • 84866788439 scopus 로고    scopus 로고
    • The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E
    • Bandyra K.J., Said N., Pfeiffer V., Górna M.W., Vogel J., Luisi B.F. The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E. Mol. Cell 2012, 47:943-953.
    • (2012) Mol. Cell , vol.47 , pp. 943-953
    • Bandyra, K.J.1    Said, N.2    Pfeiffer, V.3    Górna, M.W.4    Vogel, J.5    Luisi, B.F.6
  • 2
    • 84948763782 scopus 로고    scopus 로고
    • Accelerating Discovery and Functional Analysis of Small RNAs with New Technologies
    • Barquist L., Vogel J. Accelerating Discovery and Functional Analysis of Small RNAs with New Technologies. Annu. Rev. Genet. 2015, 49:367-394.
    • (2015) Annu. Rev. Genet. , vol.49 , pp. 367-394
    • Barquist, L.1    Vogel, J.2
  • 3
    • 77955155869 scopus 로고    scopus 로고
    • Base pairing small RNAs and their roles in global regulatory networks
    • Beisel C.L., Storz G. Base pairing small RNAs and their roles in global regulatory networks. FEMS Microbiol. Rev. 2010, 34:866-882.
    • (2010) FEMS Microbiol. Rev. , vol.34 , pp. 866-882
    • Beisel, C.L.1    Storz, G.2
  • 4
    • 79251559383 scopus 로고    scopus 로고
    • The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli
    • Beisel C.L., Storz G. The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. Mol. Cell 2011, 41:286-297.
    • (2011) Mol. Cell , vol.41 , pp. 286-297
    • Beisel, C.L.1    Storz, G.2
  • 5
    • 84859915108 scopus 로고    scopus 로고
    • Multiple factors dictate target selection by Hfq-binding small RNAs
    • Beisel C.L., Updegrove T.B., Janson B.J., Storz G. Multiple factors dictate target selection by Hfq-binding small RNAs. EMBO J. 2012, 31:1961-1974.
    • (2012) EMBO J. , vol.31 , pp. 1961-1974
    • Beisel, C.L.1    Updegrove, T.B.2    Janson, B.J.3    Storz, G.4
  • 6
    • 50949128638 scopus 로고    scopus 로고
    • Porin biogenesis activates the sigma(E) response in Salmonella hfq mutants
    • Bossi L., Maloriol D., Figueroa-Bossi N. Porin biogenesis activates the sigma(E) response in Salmonella hfq mutants. Biochimie 2008, 90:1539-1544.
    • (2008) Biochimie , vol.90 , pp. 1539-1544
    • Bossi, L.1    Maloriol, D.2    Figueroa-Bossi, N.3
  • 8
    • 75249100904 scopus 로고    scopus 로고
    • The role of Hfq in bacterial pathogens
    • Chao Y., Vogel J. The role of Hfq in bacterial pathogens. Curr. Opin. Microbiol. 2010, 13:24-33.
    • (2010) Curr. Opin. Microbiol. , vol.13 , pp. 24-33
    • Chao, Y.1    Vogel, J.2
  • 9
    • 84867577054 scopus 로고    scopus 로고
    • An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs
    • Chao Y., Papenfort K., Reinhardt R., Sharma C.M., Vogel J. An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs. EMBO J. 2012, 31:4005-4019.
    • (2012) EMBO J. , vol.31 , pp. 4005-4019
    • Chao, Y.1    Papenfort, K.2    Reinhardt, R.3    Sharma, C.M.4    Vogel, J.5
  • 10
    • 84859988230 scopus 로고    scopus 로고
    • Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA
    • Corcoran C.P., Podkaminski D., Papenfort K., Urban J.H., Hinton J.C., Vogel J. Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA. Mol. Microbiol. 2012, 84:428-445.
    • (2012) Mol. Microbiol. , vol.84 , pp. 428-445
    • Corcoran, C.P.1    Podkaminski, D.2    Papenfort, K.3    Urban, J.H.4    Hinton, J.C.5    Vogel, J.6
  • 11
    • 19744376674 scopus 로고    scopus 로고
    • Global topology analysis of the Escherichia coli inner membrane proteome
    • Daley D.O., Rapp M., Granseth E., Melén K., Drew D., von Heijne G. Global topology analysis of the Escherichia coli inner membrane proteome. Science 2005, 308:1321-1323.
    • (2005) Science , vol.308 , pp. 1321-1323
    • Daley, D.O.1    Rapp, M.2    Granseth, E.3    Melén, K.4    Drew, D.5    von Heijne, G.6
  • 12
    • 0031905590 scopus 로고    scopus 로고
    • CpxP, a stress-combative member of the Cpx regulon
    • Danese P.N., Silhavy T.J. CpxP, a stress-combative member of the Cpx regulon. J. Bacteriol. 1998, 180:831-839.
    • (1998) J. Bacteriol. , vol.180 , pp. 831-839
    • Danese, P.N.1    Silhavy, T.J.2
  • 13
    • 84875457350 scopus 로고    scopus 로고
    • Bacterial small RNA-based negative regulation: Hfq and its accomplices
    • De Lay N., Schu D.J., Gottesman S. Bacterial small RNA-based negative regulation: Hfq and its accomplices. J. Biol. Chem. 2013, 288:7996-8003.
    • (2013) J. Biol. Chem. , vol.288 , pp. 7996-8003
    • De Lay, N.1    Schu, D.J.2    Gottesman, S.3
  • 14
    • 0037135593 scopus 로고    scopus 로고
    • Genome-wide profiling of promoter recognition by the two-component response regulator CpxR-P in Escherichia coli
    • De Wulf P., McGuire A.M., Liu X., Lin E.C. Genome-wide profiling of promoter recognition by the two-component response regulator CpxR-P in Escherichia coli. J. Biol. Chem. 2002, 277:26652-26661.
    • (2002) J. Biol. Chem. , vol.277 , pp. 26652-26661
    • De Wulf, P.1    McGuire, A.M.2    Liu, X.3    Lin, E.C.4
  • 15
    • 0032489662 scopus 로고    scopus 로고
    • Topological study of Vibrio alginolyticus NhaB Na+/H+ antiporter using gene fusions in Escherichia coli cells
    • Enomoto H., Unemoto T., Nishibuchi M., Padan E., Nakamura T. Topological study of Vibrio alginolyticus NhaB Na+/H+ antiporter using gene fusions in Escherichia coli cells. Biochim. Biophys. Acta 1998, 1370:77-86.
    • (1998) Biochim. Biophys. Acta , vol.1370 , pp. 77-86
    • Enomoto, H.1    Unemoto, T.2    Nishibuchi, M.3    Padan, E.4    Nakamura, T.5
  • 16
    • 84907504864 scopus 로고    scopus 로고
    • Bacterial sigma factors: a historical, structural, and genomic perspective
    • Feklístov A., Sharon B.D., Darst S.A., Gross C.A. Bacterial sigma factors: a historical, structural, and genomic perspective. Annu. Rev. Microbiol. 2014, 68:357-376.
    • (2014) Annu. Rev. Microbiol. , vol.68 , pp. 357-376
    • Feklístov, A.1    Sharon, B.D.2    Darst, S.A.3    Gross, C.A.4
  • 17
    • 69749123311 scopus 로고    scopus 로고
    • Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target
    • Figueroa-Bossi N., Valentini M., Malleret L., Fiorini F., Bossi L. Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target. Genes Dev. 2009, 23:2004-2015.
    • (2009) Genes Dev. , vol.23 , pp. 2004-2015
    • Figueroa-Bossi, N.1    Valentini, M.2    Malleret, L.3    Fiorini, F.4    Bossi, L.5
  • 18
    • 79961239912 scopus 로고    scopus 로고
    • Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon
    • Gogol E.B., Rhodius V.A., Papenfort K., Vogel J., Gross C.A. Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon. Proc. Natl. Acad. Sci. USA 2011, 108:12875-12880.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 12875-12880
    • Gogol, E.B.1    Rhodius, V.A.2    Papenfort, K.3    Vogel, J.4    Gross, C.A.5
  • 19
    • 84863924309 scopus 로고    scopus 로고
    • Bacterial small RNA regulators: versatile roles and rapidly evolving variations
    • Gottesman S., Storz G. Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb. Perspect. Biol. 2011, 3:a003798.
    • (2011) Cold Spring Harb. Perspect. Biol. , vol.3 , pp. a003798
    • Gottesman, S.1    Storz, G.2
  • 20
    • 84904362234 scopus 로고    scopus 로고
    • MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein
    • Guo M.S., Updegrove T.B., Gogol E.B., Shabalina S.A., Gross C.A., Storz G. MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein. Genes Dev. 2014, 28:1620-1634.
    • (2014) Genes Dev. , vol.28 , pp. 1620-1634
    • Guo, M.S.1    Updegrove, T.B.2    Gogol, E.B.3    Shabalina, S.A.4    Gross, C.A.5    Storz, G.6
  • 21
    • 84913601442 scopus 로고    scopus 로고
    • Messenger RNA degradation in bacterial cells
    • Hui M.P., Foley P.L., Belasco J.G. Messenger RNA degradation in bacterial cells. Annu. Rev. Genet. 2014, 48:537-559.
    • (2014) Annu. Rev. Genet. , vol.48 , pp. 537-559
    • Hui, M.P.1    Foley, P.L.2    Belasco, J.G.3
  • 23
    • 0035794607 scopus 로고    scopus 로고
    • Cpx signaling pathway monitors biogenesis and affects assembly and expression of P pili
    • Hung D.L., Raivio T.L., Jones C.H., Silhavy T.J., Hultgren S.J. Cpx signaling pathway monitors biogenesis and affects assembly and expression of P pili. EMBO J. 2001, 20:1508-1518.
    • (2001) EMBO J. , vol.20 , pp. 1508-1518
    • Hung, D.L.1    Raivio, T.L.2    Jones, C.H.3    Silhavy, T.J.4    Hultgren, S.J.5
  • 24
    • 83055184222 scopus 로고    scopus 로고
    • Signal integration by the Cpx-envelope stress system
    • Hunke S., Keller R., Müller V.S. Signal integration by the Cpx-envelope stress system. FEMS Microbiol. Lett. 2012, 326:12-22.
    • (2012) FEMS Microbiol. Lett. , vol.326 , pp. 12-22
    • Hunke, S.1    Keller, R.2    Müller, V.S.3
  • 25
    • 21744436321 scopus 로고    scopus 로고
    • Structure of a Na+/H+ antiporter and insights into mechanism of action and regulation by pH
    • Hunte C., Screpanti E., Venturi M., Rimon A., Padan E., Michel H. Structure of a Na+/H+ antiporter and insights into mechanism of action and regulation by pH. Nature 2005, 435:1197-1202.
    • (2005) Nature , vol.435 , pp. 1197-1202
    • Hunte, C.1    Screpanti, E.2    Venturi, M.3    Rimon, A.4    Padan, E.5    Michel, H.6
  • 26
    • 78651067735 scopus 로고    scopus 로고
    • Hfq binding at RhlB-recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli
    • Ikeda Y., Yagi M., Morita T., Aiba H. Hfq binding at RhlB-recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli. Mol. Microbiol. 2011, 79:419-432.
    • (2011) Mol. Microbiol. , vol.79 , pp. 419-432
    • Ikeda, Y.1    Yagi, M.2    Morita, T.3    Aiba, H.4
  • 27
  • 28
    • 33750297745 scopus 로고    scopus 로고
    • Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins
    • Johansen J., Rasmussen A.A., Overgaard M., Valentin-Hansen P. Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins. J. Mol. Biol. 2006, 364:1-8.
    • (2006) J. Mol. Biol. , vol.364 , pp. 1-8
    • Johansen, J.1    Rasmussen, A.A.2    Overgaard, M.3    Valentin-Hansen, P.4
  • 29
    • 13244281760 scopus 로고    scopus 로고
    • Implication of membrane localization of target mRNA in the action of a small RNA: mechanism of post-transcriptional regulation of glucose transporter in Escherichia coli
    • Kawamoto H., Morita T., Shimizu A., Inada T., Aiba H. Implication of membrane localization of target mRNA in the action of a small RNA: mechanism of post-transcriptional regulation of glucose transporter in Escherichia coli. Genes Dev. 2005, 19:328-338.
    • (2005) Genes Dev. , vol.19 , pp. 328-338
    • Kawamoto, H.1    Morita, T.2    Shimizu, A.3    Inada, T.4    Aiba, H.5
  • 30
    • 84896716623 scopus 로고    scopus 로고
    • Inverse regulation of Fe- and Ni-containing SOD genes by a Fur family regulator Nur through small RNA processed from 3'UTR of the sodF mRNA
    • Kim H.M., Shin J.H., Cho Y.B., Roe J.H. Inverse regulation of Fe- and Ni-containing SOD genes by a Fur family regulator Nur through small RNA processed from 3'UTR of the sodF mRNA. Nucleic Acids Res. 2014, 42:2003-2014.
    • (2014) Nucleic Acids Res. , vol.42 , pp. 2003-2014
    • Kim, H.M.1    Shin, J.H.2    Cho, Y.B.3    Roe, J.H.4
  • 31
    • 55449126342 scopus 로고    scopus 로고
    • Mistranslation of membrane proteins and two-component system activation trigger antibiotic-mediated cell death
    • Kohanski M.A., Dwyer D.J., Wierzbowski J., Cottarel G., Collins J.J. Mistranslation of membrane proteins and two-component system activation trigger antibiotic-mediated cell death. Cell 2008, 135:679-690.
    • (2008) Cell , vol.135 , pp. 679-690
    • Kohanski, M.A.1    Dwyer, D.J.2    Wierzbowski, J.3    Cottarel, G.4    Collins, J.J.5
  • 33
    • 84928893761 scopus 로고    scopus 로고
    • A 3' external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise
    • Lalaouna D., Carrier M.C., Semsey S., Brouard J.S., Wang J., Wade J.T., Massé E. A 3' external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise. Mol. Cell 2015, 58:393-405.
    • (2015) Mol. Cell , vol.58 , pp. 393-405
    • Lalaouna, D.1    Carrier, M.C.2    Semsey, S.3    Brouard, J.S.4    Wang, J.5    Wade, J.T.6    Massé, E.7
  • 34
    • 3142564584 scopus 로고    scopus 로고
    • The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae
    • Lenz D.H., Mok K.C., Lilley B.N., Kulkarni R.V., Wingreen N.S., Bassler B.L. The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae. Cell 2004, 118:69-82.
    • (2004) Cell , vol.118 , pp. 69-82
    • Lenz, D.H.1    Mok, K.C.2    Lilley, B.N.3    Kulkarni, R.V.4    Wingreen, N.S.5    Bassler, B.L.6
  • 35
    • 0037007078 scopus 로고    scopus 로고
    • A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
    • Massé E., Gottesman S. A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc. Natl. Acad. Sci. USA 2002, 99:4620-4625.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 4620-4625
    • Massé, E.1    Gottesman, S.2
  • 36
    • 0028341449 scopus 로고
    • A+U content rather than a particular nucleotide order determines the specificity of RNase E cleavage
    • McDowall K.J., Lin-Chao S., Cohen S.N. A+U content rather than a particular nucleotide order determines the specificity of RNase E cleavage. J. Biol. Chem. 1994, 269:10790-10796.
    • (1994) J. Biol. Chem. , vol.269 , pp. 10790-10796
    • McDowall, K.J.1    Lin-Chao, S.2    Cohen, S.N.3
  • 37
    • 84931570743 scopus 로고    scopus 로고
    • Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA
    • Miyakoshi M., Chao Y., Vogel J. Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA. EMBO J. 2015, 34:1478-1492.
    • (2015) EMBO J. , vol.34 , pp. 1478-1492
    • Miyakoshi, M.1    Chao, Y.2    Vogel, J.3
  • 38
    • 84922444526 scopus 로고    scopus 로고
    • Regulatory small RNAs from the 3' regions of bacterial mRNAs
    • Miyakoshi M., Chao Y., Vogel J. Regulatory small RNAs from the 3' regions of bacterial mRNAs. Curr. Opin. Microbiol. 2015, 24:132-139.
    • (2015) Curr. Opin. Microbiol. , vol.24 , pp. 132-139
    • Miyakoshi, M.1    Chao, Y.2    Vogel, J.3
  • 39
    • 8544261105 scopus 로고    scopus 로고
    • Enolase in the RNA degradosome plays a crucial role in the rapid decay of glucose transporter mRNA in the response to phosphosugar stress in Escherichia coli
    • Morita T., Kawamoto H., Mizota T., Inada T., Aiba H. Enolase in the RNA degradosome plays a crucial role in the rapid decay of glucose transporter mRNA in the response to phosphosugar stress in Escherichia coli. Mol. Microbiol. 2004, 54:1063-1075.
    • (2004) Mol. Microbiol. , vol.54 , pp. 1063-1075
    • Morita, T.1    Kawamoto, H.2    Mizota, T.3    Inada, T.4    Aiba, H.5
  • 40
    • 0034810827 scopus 로고    scopus 로고
    • Residue aspartate-147 from the third transmembrane region of Na(+)/H(+) antiporter NhaB of Vibrio alginolyticus plays a role in its activity
    • Nakamura T., Fujisaki Y., Enomoto H., Nakayama Y., Takabe T., Yamaguchi N., Uozumi N. Residue aspartate-147 from the third transmembrane region of Na(+)/H(+) antiporter NhaB of Vibrio alginolyticus plays a role in its activity. J. Bacteriol. 2001, 183:5762-5767.
    • (2001) J. Bacteriol. , vol.183 , pp. 5762-5767
    • Nakamura, T.1    Fujisaki, Y.2    Enomoto, H.3    Nakayama, Y.4    Takabe, T.5    Yamaguchi, N.6    Uozumi, N.7
  • 41
    • 11844292053 scopus 로고    scopus 로고
    • The Cpx envelope stress response affects expression of the type IV bundle-forming pili of enteropathogenic Escherichia coli
    • Nevesinjac A.Z., Raivio T.L. The Cpx envelope stress response affects expression of the type IV bundle-forming pili of enteropathogenic Escherichia coli. J. Bacteriol. 2005, 187:672-686.
    • (2005) J. Bacteriol. , vol.187 , pp. 672-686
    • Nevesinjac, A.Z.1    Raivio, T.L.2
  • 43
    • 34250099388 scopus 로고
    • Evolution in bacteria: evidence for a universal substitution rate in cellular genomes
    • Ochman H., Wilson A.C. Evolution in bacteria: evidence for a universal substitution rate in cellular genomes. J. Mol. Evol. 1987, 26:74-86.
    • (1987) J. Mol. Evol. , vol.26 , pp. 74-86
    • Ochman, H.1    Wilson, A.C.2
  • 44
    • 0037133315 scopus 로고    scopus 로고
    • Surface sensing and adhesion of Escherichia coli controlled by the Cpx-signaling pathway
    • Otto K., Silhavy T.J. Surface sensing and adhesion of Escherichia coli controlled by the Cpx-signaling pathway. Proc. Natl. Acad. Sci. USA 2002, 99:2287-2292.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 2287-2292
    • Otto, K.1    Silhavy, T.J.2
  • 45
    • 84915760848 scopus 로고    scopus 로고
    • Small RNA functions in carbon metabolism and virulence of enteric pathogens
    • Papenfort K., Vogel J. Small RNA functions in carbon metabolism and virulence of enteric pathogens. Front. Cell. Infect. Microbiol. 2014, 4:91.
    • (2014) Front. Cell. Infect. Microbiol. , vol.4 , pp. 91
    • Papenfort, K.1    Vogel, J.2
  • 46
    • 84876234571 scopus 로고    scopus 로고
    • Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis
    • Papenfort K., Sun Y., Miyakoshi M., Vanderpool C.K., Vogel J. Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis. Cell 2013, 153:426-437.
    • (2013) Cell , vol.153 , pp. 426-437
    • Papenfort, K.1    Sun, Y.2    Miyakoshi, M.3    Vanderpool, C.K.4    Vogel, J.5
  • 47
    • 84940404135 scopus 로고    scopus 로고
    • Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella
    • Papenfort K., Espinosa E., Casadesús J., Vogel J. Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella. Proc. Natl. Acad. Sci. USA 2015, 112:E4772-E4781.
    • (2015) Proc. Natl. Acad. Sci. USA , vol.112 , pp. E4772-E4781
    • Papenfort, K.1    Espinosa, E.2    Casadesús, J.3    Vogel, J.4
  • 48
    • 84922440514 scopus 로고    scopus 로고
    • Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation
    • Papenfort K., Förstner K.U., Cong J.P., Sharma C.M., Bassler B.L. Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation. Proc. Natl. Acad. Sci. USA 2015, 112:E766-E775.
    • (2015) Proc. Natl. Acad. Sci. USA , vol.112 , pp. E766-E775
    • Papenfort, K.1    Förstner, K.U.2    Cong, J.P.3    Sharma, C.M.4    Bassler, B.L.5
  • 49
    • 0028099667 scopus 로고
    • Kinetic properties of NhaB, a Na+/H+ antiporter from Escherichia coli
    • Pinner E., Padan E., Schuldiner S. Kinetic properties of NhaB, a Na+/H+ antiporter from Escherichia coli. J. Biol. Chem. 1994, 269:26274-26279.
    • (1994) J. Biol. Chem. , vol.269 , pp. 26274-26279
    • Pinner, E.1    Padan, E.2    Schuldiner, S.3
  • 50
    • 0023025772 scopus 로고
    • Evidence for a protonmotive force related regulatory system in Escherichia coli and its effects on lactose transport
    • Plate C.A., Seely S.A., Laffler T.G. Evidence for a protonmotive force related regulatory system in Escherichia coli and its effects on lactose transport. Biochemistry 1986, 25:6127-6132.
    • (1986) Biochemistry , vol.25 , pp. 6127-6132
    • Plate, C.A.1    Seely, S.A.2    Laffler, T.G.3
  • 51
    • 0025900736 scopus 로고
    • Utilization of exogenous glucose-1-phosphate as a source of carbon or phosphate by Escherichia coli K12: respective roles of acid glucose-1-phosphatase, hexose-phosphate permease, phosphoglucomutase and alkaline phosphatase
    • Pradel E., Boquet P.L. Utilization of exogenous glucose-1-phosphate as a source of carbon or phosphate by Escherichia coli K12: respective roles of acid glucose-1-phosphatase, hexose-phosphate permease, phosphoglucomutase and alkaline phosphatase. Res. Microbiol. 1991, 142:37-45.
    • (1991) Res. Microbiol. , vol.142 , pp. 37-45
    • Pradel, E.1    Boquet, P.L.2
  • 52
    • 63049096052 scopus 로고    scopus 로고
    • Characterization of the Cpx regulon in Escherichia coli strain MC4100
    • Price N.L., Raivio T.L. Characterization of the Cpx regulon in Escherichia coli strain MC4100. J. Bacteriol. 2009, 191:1798-1815.
    • (2009) J. Bacteriol. , vol.191 , pp. 1798-1815
    • Price, N.L.1    Raivio, T.L.2
  • 53
    • 0034780493 scopus 로고    scopus 로고
    • Periplasmic stress and ECF sigma factors
    • Raivio T.L., Silhavy T.J. Periplasmic stress and ECF sigma factors. Annu. Rev. Microbiol. 2001, 55:591-624.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 591-624
    • Raivio, T.L.1    Silhavy, T.J.2
  • 54
    • 0032851357 scopus 로고    scopus 로고
    • The Cpx envelope stress response is controlled by amplification and feedback inhibition
    • Raivio T.L., Popkin D.L., Silhavy T.J. The Cpx envelope stress response is controlled by amplification and feedback inhibition. J. Bacteriol. 1999, 181:5263-5272.
    • (1999) J. Bacteriol. , vol.181 , pp. 5263-5272
    • Raivio, T.L.1    Popkin, D.L.2    Silhavy, T.J.3
  • 55
    • 84880011537 scopus 로고    scopus 로고
    • The Escherichia coli Cpx envelope stress response regulates genes of diverse function that impact antibiotic resistance and membrane integrity
    • Raivio T.L., Leblanc S.K., Price N.L. The Escherichia coli Cpx envelope stress response regulates genes of diverse function that impact antibiotic resistance and membrane integrity. J. Bacteriol. 2013, 195:2755-2767.
    • (2013) J. Bacteriol. , vol.195 , pp. 2755-2767
    • Raivio, T.L.1    Leblanc, S.K.2    Price, N.L.3
  • 56
    • 80053438183 scopus 로고    scopus 로고
    • Molecular call and response: the physiology of bacterial small RNAs
    • Richards G.R., Vanderpool C.K. Molecular call and response: the physiology of bacterial small RNAs. Biochim. Biophys. Acta 2011, 1809:525-531.
    • (2011) Biochim. Biophys. Acta , vol.1809 , pp. 525-531
    • Richards, G.R.1    Vanderpool, C.K.2
  • 57
    • 33845713571 scopus 로고    scopus 로고
    • The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium
    • Sittka A., Pfeiffer V., Tedin K., Vogel J. The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium. Mol. Microbiol. 2007, 63:193-217.
    • (2007) Mol. Microbiol. , vol.63 , pp. 193-217
    • Sittka, A.1    Pfeiffer, V.2    Tedin, K.3    Vogel, J.4
  • 58
    • 34948827356 scopus 로고    scopus 로고
    • Defining the roles of the periplasmic chaperones SurA, Skp, and DegP in Escherichia coli
    • Sklar J.G., Wu T., Kahne D., Silhavy T.J. Defining the roles of the periplasmic chaperones SurA, Skp, and DegP in Escherichia coli. Genes Dev. 2007, 21:2473-2484.
    • (2007) Genes Dev. , vol.21 , pp. 2473-2484
    • Sklar, J.G.1    Wu, T.2    Kahne, D.3    Silhavy, T.J.4
  • 59
    • 0028983261 scopus 로고
    • Overproduction of NlpE, a new outer membrane lipoprotein, suppresses the toxicity of periplasmic LacZ by activation of the Cpx signal transduction pathway
    • Snyder W.B., Davis L.J., Danese P.N., Cosma C.L., Silhavy T.J. Overproduction of NlpE, a new outer membrane lipoprotein, suppresses the toxicity of periplasmic LacZ by activation of the Cpx signal transduction pathway. J. Bacteriol. 1995, 177:4216-4223.
    • (1995) J. Bacteriol. , vol.177 , pp. 4216-4223
    • Snyder, W.B.1    Davis, L.J.2    Danese, P.N.3    Cosma, C.L.4    Silhavy, T.J.5
  • 60
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: expanding frontiers
    • Storz G., Vogel J., Wassarman K.M. Regulation by small RNAs in bacteria: expanding frontiers. Mol. Cell 2011, 43:880-891.
    • (2011) Mol. Cell , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 61
    • 34249807616 scopus 로고    scopus 로고
    • SigmaE regulates and is regulated by a small RNA in Escherichia coli
    • Thompson K.M., Rhodius V.A., Gottesman S. SigmaE regulates and is regulated by a small RNA in Escherichia coli. J. Bacteriol. 2007, 189:4243-4256.
    • (2007) J. Bacteriol. , vol.189 , pp. 4243-4256
    • Thompson, K.M.1    Rhodius, V.A.2    Gottesman, S.3
  • 65
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • Vogel J., Luisi B.F. Hfq and its constellation of RNA. Nat. Rev. Microbiol. 2011, 9:578-589.
    • (2011) Nat. Rev. Microbiol. , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 66
    • 84899932222 scopus 로고    scopus 로고
    • Hfq reduces envelope stress by controlling expression of envelope-localized proteins and protein complexes in enteropathogenic Escherichia coli
    • Vogt S.L., Raivio T.L. Hfq reduces envelope stress by controlling expression of envelope-localized proteins and protein complexes in enteropathogenic Escherichia coli. Mol. Microbiol. 2014, 92:681-697.
    • (2014) Mol. Microbiol. , vol.92 , pp. 681-697
    • Vogt, S.L.1    Raivio, T.L.2
  • 67
    • 84914147142 scopus 로고    scopus 로고
    • The Cpx envelope stress response regulates and is regulated by small noncoding RNAs
    • Vogt S.L., Evans A.D., Guest R.L., Raivio T.L. The Cpx envelope stress response regulates and is regulated by small noncoding RNAs. J. Bacteriol. 2014, 196:4229-4238.
    • (2014) J. Bacteriol. , vol.196 , pp. 4229-4238
    • Vogt, S.L.1    Evans, A.D.2    Guest, R.L.3    Raivio, T.L.4
  • 68
    • 84945484697 scopus 로고    scopus 로고
    • Small RNAs in bacteria and archaea: who they are, what they do, and how they do it
    • Wagner E.G., Romby P. Small RNAs in bacteria and archaea: who they are, what they do, and how they do it. Adv. Genet. 2015, 90:133-208.
    • (2015) Adv. Genet. , vol.90 , pp. 133-208
    • Wagner, E.G.1    Romby, P.2
  • 70
    • 84948844822 scopus 로고    scopus 로고
    • Splicing noncoding RNAs from the inside out
    • Yang L. Splicing noncoding RNAs from the inside out. Wiley Interdiscip. Rev. RNA 2015, 6:651-660.
    • (2015) Wiley Interdiscip. Rev. RNA , vol.6 , pp. 651-660
    • Yang, L.1
  • 71
    • 79953229542 scopus 로고    scopus 로고
    • Structural basis for two-component system inhibition and pilus sensing by the auxiliary CpxP protein
    • Zhou X., Keller R., Volkmer R., Krauss N., Scheerer P., Hunke S. Structural basis for two-component system inhibition and pilus sensing by the auxiliary CpxP protein. J. Biol. Chem. 2011, 286:9805-9814.
    • (2011) J. Biol. Chem. , vol.286 , pp. 9805-9814
    • Zhou, X.1    Keller, R.2    Volkmer, R.3    Krauss, N.4    Scheerer, P.5    Hunke, S.6


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