-
1
-
-
0019888537
-
Evidence for two functional gal promoters in intact Escherichia coli cells
-
Aiba, H., Adhya, S., and de Crombrugghe, B. (1981) Evidence for two functional gal promoters in intact Escherichia coli cells. J Biol Chem 256: 11905-11910.
-
(1981)
J Biol Chem
, vol.256
, pp. 11905-11910
-
-
Aiba, H.1
Adhya, S.2
De Crombrugghe, B.3
-
2
-
-
1542267833
-
Global analysis of Escherichia coli RNA degradosome function using DNA microarrays
-
Bernstein, J.A., Lin, P.H., Cohen, S.N., and Lin-Chao, S. (2004) Global analysis of Escherichia coli RNA degradosome function using DNA microarrays. Proc Natl Acad Sci USA 101: 2758-2763.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 2758-2763
-
-
Bernstein, J.A.1
Lin, P.H.2
Cohen, S.N.3
Lin-Chao, S.4
-
3
-
-
0019358924
-
Construction and fine mapping of recombinant plasmids containing the rrnB ribosomal RNA operon of E. coli
-
Brosius, J., Ullrich, A., Raker, M.A., Gray, A., Dull, T.J., Gutell, R.R., and Noller, H.F. (1981) Construction and fine mapping of recombinant plasmids containing the rrnB ribosomal RNA operon of E. coli. Plasmid 6: 112-118.
-
(1981)
Plasmid
, vol.6
, pp. 112-118
-
-
Brosius, J.1
Ullrich, A.2
Raker, M.A.3
Gray, A.4
Dull, T.J.5
Gutell, R.R.6
Noller, H.F.7
-
4
-
-
0036549769
-
The Escherichia coli RNA degradosome: Structure, function and relationship in other ribonucleolytic multienzyme complexes
-
Carpousis, A.J. (2002) The Escherichia coli RNA degradosome: structure, function and relationship in other ribonucleolytic multienzyme complexes. Biochem Soc Trans 30: 150-155.
-
(2002)
Biochem Soc Trans
, vol.30
, pp. 150-155
-
-
Carpousis, A.J.1
-
5
-
-
0028269435
-
Copurification of E. coli RNAase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation
-
Carpousis, A.J., Van Houwe, G., Ehretsmann, C., and Krisch, H.M. (1994) Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76: 889-900.
-
(1994)
Cell
, vol.76
, pp. 889-900
-
-
Carpousis, A.J.1
Van Houwe, G.2
Ehretsmann, C.3
Krisch, H.M.4
-
6
-
-
0032617132
-
Degradation of mRNA in Escherichia coli: An old problem with some new twists
-
Coburn, G.A., and Mackie, G.A. (1999) Degradation of mRNA in Escherichia coli: an old problem with some new twists. Prog Nucleic Acid Res Mol Biol 62: 55-108.
-
(1999)
Prog Nucleic Acid Res Mol Biol
, vol.62
, pp. 55-108
-
-
Coburn, G.A.1
Mackie, G.A.2
-
7
-
-
0033214259
-
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase
-
Coburn, G.A., Miao, X., Briant, D.J., and Mackie, G.A. (1999) Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase. Genes Dev 13: 2594-2603.
-
(1999)
Genes Dev
, vol.13
, pp. 2594-2603
-
-
Coburn, G.A.1
Miao, X.2
Briant, D.J.3
Mackie, G.A.4
-
8
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K.A., and Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 6640-6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
10
-
-
0014409656
-
Factor fraction required for the synthesis of bacteriophage Qbeta-RNA
-
Franze de Fernandez, M.T., Eoyang, L., and August, J.T. (1968) Factor fraction required for the synthesis of bacteriophage Qbeta-RNA. Nature 219: 588-590.
-
(1968)
Nature
, vol.219
, pp. 588-590
-
-
Franze De Fernandez, M.T.1
Eoyang, L.2
August, J.T.3
-
11
-
-
0037112006
-
Stealth regulation: Biological circuits with small RNA switches
-
Gottesman, S. (2002) Stealth regulation: biological circuits with small RNA switches. Genes Dev 16: 2829-2842.
-
(2002)
Genes Dev
, vol.16
, pp. 2829-2842
-
-
Gottesman, S.1
-
12
-
-
0033368475
-
Messenger RNA stability and its role in control of gene expression in bacteria and phages
-
Grunberg-Manago, M. (1999) Messenger RNA stability and its role in control of gene expression in bacteria and phages. Annu Rev Genet 33: 193-227.
-
(1999)
Annu Rev Genet
, vol.33
, pp. 193-227
-
-
Grunberg-Manago, M.1
-
13
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
Guzman, L.M., Belin, D., Carson, M.J., and Beckwith, J. (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J Bacteriol 177: 4121-4130.
-
(1995)
J Bacteriol
, vol.177
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
14
-
-
0017751502
-
Properties of Escherichia coli mutants deficient in enzymes of glycolysis
-
Irani, M.H., and Maitra, P.K. (1977) Properties of Escherichia coli mutants deficient in enzymes of glycolysis. J Bacteriol 132: 398-410.
-
(1977)
J Bacteriol
, vol.132
, pp. 398-410
-
-
Irani, M.H.1
Maitra, P.K.2
-
15
-
-
0033048066
-
Moonlighting proteins
-
Jeffery, C.J. (1999) Moonlighting proteins. Trends Biochem Sci 24: 8-11.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 8-11
-
-
Jeffery, C.J.1
-
16
-
-
1242342956
-
The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers
-
Khemici, V., and Carpousis, A.J. (2004) The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers. Mol Microbiol 51: 777-790.
-
(2004)
Mol Microbiol
, vol.51
, pp. 777-790
-
-
Khemici, V.1
Carpousis, A.J.2
-
17
-
-
0029889965
-
RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli
-
Kido, M., Yamanaka, K., Mitani, T., Niki, H., Ogura, T., and Hiraga, S. (1996) RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli. J Bacteriol 178: 3917-3925.
-
(1996)
J Bacteriol
, vol.178
, pp. 3917-3925
-
-
Kido, M.1
Yamanaka, K.2
Mitani, T.3
Niki, H.4
Ogura, T.5
Hiraga, S.6
-
18
-
-
0035796390
-
Expression of the glucose transporter gene, ptsG, is regulated at the mRNA degradation step in response to glycolytic flux in Escherichia coli
-
Kimata, K., Tanaka, Y., Inada, T., and Aiba, H. (2001) Expression of the glucose transporter gene, ptsG, is regulated at the mRNA degradation step in response to glycolytic flux in Escherichia coli. EMBO J 20: 3587-3595.
-
(2001)
EMBO J
, vol.20
, pp. 3587-3595
-
-
Kimata, K.1
Tanaka, Y.2
Inada, T.3
Aiba, H.4
-
19
-
-
0036719292
-
mRNA decay in Escherichia coli comes of age
-
discussion 4657
-
Kushner, S.R. (2002) mRNA decay in Escherichia coli comes of age. J Bacteriol 184: 4658-4665; discussion 4657.
-
(2002)
J Bacteriol
, vol.184
, pp. 4658-4665
-
-
Kushner, S.R.1
-
20
-
-
0036274640
-
RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coli
-
Lee, K., Bernstein, J.A., and Cohen, S.N. (2002) RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coli. Mol Microbiol 43: 1445-1456.
-
(2002)
Mol Microbiol
, vol.43
, pp. 1445-1456
-
-
Lee, K.1
Bernstein, J.A.2
Cohen, S.N.3
-
21
-
-
0035793043
-
RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E
-
Liou, G.G., Jane, W.N., Cohen, S.N., Lin, N.S., and Lin-Chao, S. (2001) RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E. Proc Natl Acad Sci USA 98: 63-68.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 63-68
-
-
Liou, G.G.1
Jane, W.N.2
Cohen, S.N.3
Lin, N.S.4
Lin-Chao, S.5
-
22
-
-
0033048415
-
The C-terminal half of RNase E, which organizes the Escherichia coli degradosome, participates in mRNA degradation but not rRNA processing in vivo
-
Lopez, P.J., Marchand, I., Joyce, S.A., and Dreyfus, M. (1999) The C-terminal half of RNase E, which organizes the Escherichia coli degradosome, participates in mRNA degradation but not rRNA processing in vivo. Mol Microbiol 33: 188-199.
-
(1999)
Mol Microbiol
, vol.33
, pp. 188-199
-
-
Lopez, P.J.1
Marchand, I.2
Joyce, S.A.3
Dreyfus, M.4
-
23
-
-
0029962989
-
The N-terminal domain of the rne gene product has RNase E activity and is non-overlapping with the arginine-rich RNA-binding site
-
McDowall, K.J., and Cohen, S.N. (1996) The N-terminal domain of the rne gene product has RNase E activity and is non-overlapping with the arginine-rich RNA-binding site. J Mol Biol 255: 349-355.
-
(1996)
J Mol Biol
, vol.255
, pp. 349-355
-
-
McDowall, K.J.1
Cohen, S.N.2
-
24
-
-
0037007078
-
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
-
Masse, E., and Gottesman, S. (2002) A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc Natl Acad Sci USA 99: 4620-4625.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 4620-4625
-
-
Masse, E.1
Gottesman, S.2
-
25
-
-
0141860088
-
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
-
Masse, E., Escorcia, F.E., and Gottesman, S. (2003) Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev 17: 2374-2383.
-
(2003)
Genes Dev
, vol.17
, pp. 2374-2383
-
-
Masse, E.1
Escorcia, F.E.2
Gottesman, S.3
-
26
-
-
0029976430
-
Proteins associated with RNase E in a multicomponent ribonucleolytic complex
-
Miczak, A., Kaberdin, V.R., Wei, C.L., and Lin-Chao, S. (1996) Proteins associated with RNase E in a multicomponent ribonucleolytic complex. Proc Natl Acad Sci USA 93: 3865-3869.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 3865-3869
-
-
Miczak, A.1
Kaberdin, V.R.2
Wei, C.L.3
Lin-Chao, S.4
-
27
-
-
0002782867
-
Hfq: A bacterial Sm-like protein that mediates RNA-RNA interaction
-
Moller, T., Franch, T., Hojrup, P., Keene, D.R., Bachinger, H.P., Brennan, R.G., and Valentin-Hansen, P. (2002) Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction. Mol Cell 9: 23-30.
-
(2002)
Mol Cell
, vol.9
, pp. 23-30
-
-
Moller, T.1
Franch, T.2
Hojrup, P.3
Keene, D.R.4
Bachinger, H.P.5
Brennan, R.G.6
Valentin-Hansen, P.7
-
28
-
-
0037844900
-
Accumulation of glucose 6-phosphate or fructose 6-phosphate is responsible for destabilization of glucose transporter mRNA in Escherichia coli
-
Morita, T., El-Kazzaz, W., Tanaka, Y., Inada, T., and Aiba, H. (2003) Accumulation of glucose 6-phosphate or fructose 6-phosphate is responsible for destabilization of glucose transporter mRNA in Escherichia coli. J Biol Chem 278: 15608-15614.
-
(2003)
J Biol Chem
, vol.278
, pp. 15608-15614
-
-
Morita, T.1
El-Kazzaz, W.2
Tanaka, Y.3
Inada, T.4
Aiba, H.5
-
29
-
-
0035919778
-
The relationship between translational control and mRNA degradation for the Escherichia coli threonyl-tRNA synthetase gene
-
Nogueira, T., de Smit, M., Graffe, M., and Springer, M. (2001) The relationship between translational control and mRNA degradation for the Escherichia coli threonyl-tRNA synthetase gene. J Mol Biol 310: 709-722.
-
(2001)
J Mol Biol
, vol.310
, pp. 709-722
-
-
Nogueira, T.1
De Smit, M.2
Graffe, M.3
Springer, M.4
-
30
-
-
0036571060
-
Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli
-
Ow, M.C., and Kushner, S.R. (2002) Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli. Genes Dev 16: 1102-1115.
-
(2002)
Genes Dev
, vol.16
, pp. 1102-1115
-
-
Ow, M.C.1
Kushner, S.R.2
-
31
-
-
0033636189
-
Analysis of mRNA decay and rRNA processing in Escherichia coli in the absence of RNase E-based degradosome assembly
-
Ow, M.C., Liu, Q., and Kushner, S.R. (2000) Analysis of mRNA decay and rRNA processing in Escherichia coli in the absence of RNase E-based degradosome assembly. Mol Microbiol 38: 854-866.
-
(2000)
Mol Microbiol
, vol.38
, pp. 854-866
-
-
Ow, M.C.1
Liu, Q.2
Kushner, S.R.3
-
32
-
-
0029922992
-
A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
-
Py, B., Higgins, C.F., Krisch, H.M., and Carpousis, A.J. (1996) A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381: 169-172.
-
(1996)
Nature
, vol.381
, pp. 169-172
-
-
Py, B.1
Higgins, C.F.2
Krisch, H.M.3
Carpousis, A.J.4
-
33
-
-
0242400018
-
Degradation of mRNA in bacteria: Emergence of ubiquitous features
-
Regnier, P., and Arraiano, C.M. (2000) Degradation of mRNA in bacteria: emergence of ubiquitous features. Bioessays 22: 235-244.
-
(2000)
Bioessays
, vol.22
, pp. 235-244
-
-
Regnier, P.1
Arraiano, C.M.2
-
34
-
-
0030711638
-
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12
-
Tsui, H.C., Feng, G., and Winkler, M.E. (1997) Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. J Bacteriol 179: 7476-7487.
-
(1997)
J Bacteriol
, vol.179
, pp. 7476-7487
-
-
Tsui, H.C.1
Feng, G.2
Winkler, M.E.3
-
35
-
-
0035910078
-
Epitope tagging of chromosomal genes in Salmonella
-
Uzzau, S., Figueroa-Bossi, N., Rubino, S., and Bossi, L. (2001) Epitope tagging of chromosomal genes in Salmonella. Proc Natl Acad Sci USA 98: 15264-15269.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 15264-15269
-
-
Uzzau, S.1
Figueroa-Bossi, N.2
Rubino, S.3
Bossi, L.4
-
36
-
-
1642565815
-
The bacterial Sm-like protein Hfq: A key player in RNA transactions
-
Valentin-Hansen, P., Eriksen, M., and Udesen, C. (2004) The bacterial Sm-like protein Hfq: a key player in RNA transactions. Mol Microbiol 51: 1525-1533.
-
(2004)
Mol Microbiol
, vol.51
, pp. 1525-1533
-
-
Valentin-Hansen, P.1
Eriksen, M.2
Udesen, C.3
-
37
-
-
8544271637
-
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system
-
doi:10.1111/j.1365-2958.2004.04348.x
-
Vanderpool, C.K., and Gottesman, S. (2004) Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system. Mol Microbiol doi:10.1111/j.1365-2958.2004.04348.x.
-
(2004)
Mol Microbiol
-
-
Vanderpool, C.K.1
Gottesman, S.2
-
38
-
-
3543037550
-
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
-
Vanzo, N.F., Li, Y.S., Py, B., Blum, E., Higgins, C.F., Raynal, L.C., et al. (1998) Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome. Genes Dev 12: 2770-2781.
-
(1998)
Genes Dev
, vol.12
, pp. 2770-2781
-
-
Vanzo, N.F.1
Li, Y.S.2
Py, B.3
Blum, E.4
Higgins, C.F.5
Raynal, L.C.6
-
39
-
-
3042812594
-
Interaction of the RNA chaperone Hfq with mRNAs: Direct and indirect roles of Hfq in iron metabolism of Escherichia coli
-
Vecerek, B., Moll, I., Afonyushkin, T., Kaberdin, V., and Blasi, U. (2003) Interaction of the RNA chaperone Hfq with mRNAs: direct and indirect roles of Hfq in iron metabolism of Escherichia coli. Mol Microbiol 50: 897-909.
-
(2003)
Mol Microbiol
, vol.50
, pp. 897-909
-
-
Vecerek, B.1
Moll, I.2
Afonyushkin, T.3
Kaberdin, V.4
Blasi, U.5
-
40
-
-
0032564363
-
Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability
-
Vytvytska, O., Jakobsen, J.S., Balcunaite, G., Andersen, J.S., Baccarini, M., and von Gabain, A. (1998) Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability. Proc Natl Acad Sci USA 95: 14118-14123.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 14118-14123
-
-
Vytvytska, O.1
Jakobsen, J.S.2
Balcunaite, G.3
Andersen, J.S.4
Baccarini, M.5
Von Gabain, A.6
-
41
-
-
0031020242
-
Functional relatioship between Escherichia coli RNase E and the CafA protein
-
Wachi, M., Umitsuki, G., and Nagai, K. (1997) Functional relatioship between Escherichia coli RNase E and the CafA protein. Mol Gen Genet 253: 515-519.
-
(1997)
Mol Gen Genet
, vol.253
, pp. 515-519
-
-
Wachi, M.1
Umitsuki, G.2
Nagai, K.3
-
42
-
-
0028945837
-
RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation
-
Xu, F., and Cohen, S.N. (1995) RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation. Nature 374: 180-183.
-
(1995)
Nature
, vol.374
, pp. 180-183
-
-
Xu, F.1
Cohen, S.N.2
-
43
-
-
0036163624
-
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs
-
Zhang, A., Wassarman, K.M., Ortega, J., Steven, A.C., and Storz, G. (2002) The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs. Mol Cell 9: 11-22.
-
(2002)
Mol Cell
, vol.9
, pp. 11-22
-
-
Zhang, A.1
Wassarman, K.M.2
Ortega, J.3
Steven, A.C.4
Storz, G.5
|