-
1
-
-
0020050946
-
Molecular mechanisms of variation in influenza viruses
-
Webster RG, Laver WG, Air GM, Schild GC. Molecular mechanisms of variation in influenza viruses. Nature. 1982;296(5853):115-21.
-
(1982)
Nature
, vol.296
, Issue.5853
, pp. 115-121
-
-
Webster, R.G.1
Laver, W.G.2
Air, G.M.3
Schild, G.C.4
-
2
-
-
28144448001
-
The origins of pandemic influenza - Lessons from the 1918 virus
-
Belshe RB. The origins of pandemic influenza - Lessons from the 1918 virus. N Engl J Med. 2005;353(21):2209-11.
-
(2005)
N Engl J Med
, vol.353
, Issue.21
, pp. 2209-2211
-
-
Belshe, R.B.1
-
3
-
-
67649538978
-
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
-
Smith GJD, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, Pybus OG, et al. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature. 2009;459(7250):1122-5.
-
(2009)
Nature
, vol.459
, Issue.7250
, pp. 1122-1125
-
-
Smith, G.J.D.1
Vijaykrishna, D.2
Bahl, J.3
Lycett, S.J.4
Worobey, M.5
Pybus, O.G.6
-
4
-
-
24944468625
-
Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses
-
Holmes EC, Ghedin E, Miller N, Taylor J, Bao YM, St George K, et al. Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses. PLoS Biol. 2005;3(9):1579-89.
-
(2005)
PLoS Biol
, vol.3
, Issue.9
, pp. 1579-1589
-
-
Holmes, E.C.1
Ghedin, E.2
Miller, N.3
Taylor, J.4
Bao, Y.M.5
St George, K.6
-
5
-
-
84865101803
-
Evolution of Novel Reassortant A/H3N2 Influenza Viruses in North American Swine and Humans, 2009-2011
-
Nelson MI, Vincent AL, Kitikoon P, Holmes EC, Gramer MR. Evolution of Novel Reassortant A/H3N2 Influenza Viruses in North American Swine and Humans, 2009-2011. J Virol. 2012;86(16):8872-8.
-
(2012)
J Virol
, vol.86
, Issue.16
, pp. 8872-8878
-
-
Nelson, M.I.1
Vincent, A.L.2
Kitikoon, P.3
Holmes, E.C.4
Gramer, M.R.5
-
6
-
-
84877785371
-
Human infection with a novel avian-origin influenza a (H7N9) virus
-
Gao RB, Cao B, Hu YW, Feng ZJ, Wang DY, Hu WF, et al. Human infection with a novel avian-origin influenza a (H7N9) virus. N Engl J Med. 2013;368(20):1888-97.
-
(2013)
N Engl J Med
, vol.368
, Issue.20
, pp. 1888-1897
-
-
Gao, R.B.1
Cao, B.2
Hu, Y.W.3
Feng, Z.J.4
Wang, D.Y.5
Hu, W.F.6
-
7
-
-
84861394598
-
Experimental adaptation of an influenza H5 HA confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets
-
Imai M, Watanabe T, Hatta M, Das SC, Ozawa M, Shinya K, et al. Experimental adaptation of an influenza H5 HA confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets. Nature. 2012;486(7403):420-8.
-
(2012)
Nature
, vol.486
, Issue.7403
, pp. 420-428
-
-
Imai, M.1
Watanabe, T.2
Hatta, M.3
Das, S.C.4
Ozawa, M.5
Shinya, K.6
-
8
-
-
84862618108
-
Airborne transmission of influenza a/H5N1 virus between ferrets
-
Herfst S, Schrauwen EJA, Linster M, Chutinimitkul S, de Wit E, Munster VJ, et al. Airborne transmission of influenza a/H5N1 virus between ferrets. Science. 2012;336(6088):1534-41.
-
(2012)
Science
, vol.336
, Issue.6088
, pp. 1534-1541
-
-
Herfst, S.1
Schrauwen, E.J.A.2
Linster, M.3
Chutinimitkul, S.4
Wit, E.5
Munster, V.J.6
-
9
-
-
79952774962
-
High genetic compatibility and increased pathogenicity of reassortants derived from avian H9N2 and pandemic H1N1/2009 influenza viruses
-
Sun YP, Qin K, Wang JJ, Pu JA, Tang QD, Hu YX, et al. High genetic compatibility and increased pathogenicity of reassortants derived from avian H9N2 and pandemic H1N1/2009 influenza viruses. Proc Natl Acad Sci U S A. 2011;108(10):4164-9.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.10
, pp. 4164-4169
-
-
Sun, Y.P.1
Qin, K.2
Wang, J.J.3
Pu, J.A.4
Tang, Q.D.5
Hu, Y.X.6
-
10
-
-
23944523882
-
Evolution of H9N2 influenza viruses from domestic poultry in Mainland China
-
Li CJ, Yu KZ, Tian GB, Yu DD, Liu LL, Jing B, et al. Evolution of H9N2 influenza viruses from domestic poultry in Mainland China. Virology. 2005;340(1):70-83.
-
(2005)
Virology
, vol.340
, Issue.1
, pp. 70-83
-
-
Li, C.J.1
Yu, K.Z.2
Tian, G.B.3
Yu, D.D.4
Liu, L.L.5
Jing, B.6
-
11
-
-
77953766201
-
Reassortment of pandemic H1N1/2009 influenza a virus in swine
-
Vijaykrishna D, Poon LLM, Zhu HC, Ma SK, Li OTW, Cheung CL, et al. Reassortment of pandemic H1N1/2009 influenza a virus in swine. Science. 2010;328(5985):1529-9.
-
(2010)
Science
, vol.328
, Issue.5985
, pp. 1529-1529
-
-
Vijaykrishna, D.1
Poon, L.L.M.2
Zhu, H.C.3
Ma, S.K.4
Li, O.T.W.5
Cheung, C.L.6
-
12
-
-
40349089871
-
Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918
-
Nelson MI, Viboud C, Simonsen L, Bennett RT, Griesemer SB, St George K, et al. Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918. PLoS Pathog. 2008;4(2):e1000012.
-
(2008)
PLoS Pathog
, vol.4
, Issue.2
, pp. e1000012
-
-
Nelson, M.I.1
Viboud, C.2
Simonsen, L.3
Bennett, R.T.4
Griesemer, S.B.5
St George, K.6
-
13
-
-
79957602568
-
Long-term evolution and transmission dynamics of swine influenza A virus
-
Vijaykrishna D, Smith GJD, Pybus OG, Zhu HC, Bhatt S, Poon LLM, et al. Long-term evolution and transmission dynamics of swine influenza A virus. Nature. 2011;473(7348):519-22.
-
(2011)
Nature
, vol.473
, Issue.7348
, pp. 519-522
-
-
Vijaykrishna, D.1
Smith, G.J.D.2
Pybus, O.G.3
Zhu, H.C.4
Bhatt, S.5
Poon, L.L.M.6
-
14
-
-
84869234110
-
Genomic reassortment of influenza A virus in North American swine, 1998-2011
-
Nelson MI, Detmer SE, Wentworth DE, Tan Y, Schwartzbard A, Halpin RA, et al. Genomic reassortment of influenza A virus in North American swine, 1998-2011. J Gen Virol. 2012;93(Pt 12):2584-9.
-
(2012)
J Gen Virol
, vol.93
, pp. 2584-2589
-
-
Nelson, M.I.1
Detmer, S.E.2
Wentworth, D.E.3
Tan, Y.4
Schwartzbard, A.5
Halpin, R.A.6
-
15
-
-
67349177735
-
The origin and global emergence of adamantane resistant A/H3N2 influenza viruses
-
Nelson MI, Simonsen L, Viboud C, Miller MA, Holmes EC. The origin and global emergence of adamantane resistant A/H3N2 influenza viruses. Virology. 2009;388(2):270-8.
-
(2009)
Virology
, vol.388
, Issue.2
, pp. 270-278
-
-
Nelson, M.I.1
Simonsen, L.2
Viboud, C.3
Miller, M.A.4
Holmes, E.C.5
-
16
-
-
67650866715
-
Dating the emergence of pandemic influenza viruses
-
Smith GJD, Bahl J, Vijaykrishna D, Zhang JX, Poon LLM, Chen HL, et al. Dating the emergence of pandemic influenza viruses. Proc Natl Acad Sci U S A. 2009;106(28):11709-12.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.28
, pp. 11709-11712
-
-
Smith, G.J.D.1
Bahl, J.2
Vijaykrishna, D.3
Zhang, J.X.4
Poon, L.L.M.5
Chen, H.L.6
-
17
-
-
84867518731
-
Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
-
Lycett SJ, Baillie G, Coulter E, Bhatt S, Kellam P, McCauley JW, et al. Estimating reassortment rates in co-circulating Eurasian swine influenza viruses. J Gen Virol. 2012;93(Pt 11):2326-36.
-
(2012)
J Gen Virol
, vol.93
, pp. 2326-2336
-
-
Lycett, S.J.1
Baillie, G.2
Coulter, E.3
Bhatt, S.4
Kellam, P.5
McCauley, J.W.6
-
18
-
-
84892724789
-
Reassortment patterns of avian influenza virus internal segments among different subtypes
-
Lu L, Lycett SJ, Brown AJL. Reassortment patterns of avian influenza virus internal segments among different subtypes. BMC Evol Biol. 2014;14:16.
-
(2014)
BMC Evol Biol
, vol.14
, pp. 16
-
-
Lu, L.1
Lycett, S.J.2
Brown, A.J.L.3
-
19
-
-
84875334049
-
Predicting hotspots for influenza virus reassortment
-
Fuller TL, Gilbert M, Martin V, Cappelle J, Hosseini P, Njabo KY, et al. Predicting hotspots for influenza virus reassortment. Emerg Infect Dis. 2013;19(4):581-8.
-
(2013)
Emerg Infect Dis
, vol.19
, Issue.4
, pp. 581-588
-
-
Fuller, T.L.1
Gilbert, M.2
Martin, V.3
Cappelle, J.4
Hosseini, P.5
Njabo, K.Y.6
-
20
-
-
58149159886
-
Uncovering Genomic Reassortments Among Influenza Strains by Enumerating Maximal Bicliques
-
ProceedingBIBM '08 Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine.
-
Nagarajan N, Kingsford C. Uncovering Genomic Reassortments Among Influenza Strains by Enumerating Maximal Bicliques. ProceedingBIBM '08 Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine. 2008. pp. 223-30.
-
(2008)
, pp. 223-230
-
-
Nagarajan, N.1
Kingsford, C.2
-
21
-
-
79953677207
-
GiRaF: robust, computational identification of influenza reassortments via graph mining
-
Nagarajan N, Kingsford C. GiRaF: robust, computational identification of influenza reassortments via graph mining. Nucleic Acids Res. 2011;39(6):e34.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.6
, pp. e34
-
-
Nagarajan, N.1
Kingsford, C.2
-
22
-
-
84865056688
-
FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry
-
Lun ATL, Wong JWH, Downard KM. FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry. BMC Bioinformatics. 2012;13:208.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 208
-
-
Lun, A.T.L.1
Wong, J.W.H.2
Downard, K.M.3
-
23
-
-
79961108019
-
Detecting transmission and reassortment events for influenza A viruses with genotype profile method
-
Dong C, Ying L, Yuan D. Detecting transmission and reassortment events for influenza A viruses with genotype profile method. Virol J. 2011;8:395.
-
(2011)
Virol J
, vol.8
, pp. 395
-
-
Dong, C.1
Ying, L.2
Yuan, D.3
-
24
-
-
54949144432
-
Ubiquitous reassortments in influenza A viruses
-
Wan XF, Ozden M, Lin G. Ubiquitous reassortments in influenza A viruses. J Bioinform Comput Biol. 2008;6(5):981-99.
-
(2008)
J Bioinform Comput Biol
, vol.6
, Issue.5
, pp. 981-999
-
-
Wan, X.F.1
Ozden, M.2
Lin, G.3
-
25
-
-
34247574837
-
Computational identification of reassortments in avian influenza viruses
-
Wan Y-F, Wu X, Lin G, Holton SB, Desmone RA, Shyu C-R, et al. Computational identification of reassortments in avian influenza viruses. Avian Dis. 2007;51(1):434-9.
-
(2007)
Avian Dis
, vol.51
, Issue.1
, pp. 434-439
-
-
Wan, Y.-F.1
Wu, X.2
Lin, G.3
Holton, S.B.4
Desmone, R.A.5
Shyu, C.-R.6
-
26
-
-
84964866659
-
A comprehensive analysis of reassortment in influenza A virus
-
de Silva UC, Tanaka H, Nakamura S, Goto N, Yasunaga T. A comprehensive analysis of reassortment in influenza A virus. Biology open. 2012;1(4):385-90.
-
(2012)
Biology open
, vol.1
, Issue.4
, pp. 385-390
-
-
Silva, U.C.1
Tanaka, H.2
Nakamura, S.3
Goto, N.4
Yasunaga, T.5
-
28
-
-
0024987651
-
Pigs as mixing vessels for the creation of new pandemic influenza A viruses
-
Scholtissek C. Pigs as mixing vessels for the creation of new pandemic influenza A viruses. Med Principles Pract. 1990;2(2):65-71.
-
(1990)
Med Principles Pract
, vol.2
, Issue.2
, pp. 65-71
-
-
Scholtissek, C.1
-
29
-
-
84869083312
-
Quail as a potential mixing vessel for the generation of new reassortant influenza A viruses
-
Thontiravong A, Kitikoon P, Wannaratana S, Tantilertcharoen R, Tuanudom R, Pakpinyo S, et al. Quail as a potential mixing vessel for the generation of new reassortant influenza A viruses. Vet Microbiol. 2012;160(3-4):305-13.
-
(2012)
Vet Microbiol
, vol.160
, Issue.3-4
, pp. 305-313
-
-
Thontiravong, A.1
Kitikoon, P.2
Wannaratana, S.3
Tantilertcharoen, R.4
Tuanudom, R.5
Pakpinyo, S.6
-
30
-
-
68049137869
-
The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate health care interventions: explanation and elaboration
-
Liberati A, Altman DG, Tetzlaff J, Mulrow C, Gotzsche PC, Ioannidis JPA, et al. The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate health care interventions: explanation and elaboration. PLoS Med. 2009;6(7):e1000100.
-
(2009)
PLoS Med
, vol.6
, Issue.7
, pp. e1000100
-
-
Liberati, A.1
Altman, D.G.2
Tetzlaff, J.3
Mulrow, C.4
Gotzsche, P.C.5
Ioannidis, J.P.A.6
-
31
-
-
84955731787
-
-
GISAID's EpiFlu Database. [ www.gisaid.org ]
-
-
-
-
32
-
-
36448991500
-
Clustal W and clustal X version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. Clustal W and clustal X version 2.0. Bioinformatics. 2007;23(21):2947-8.
-
(2007)
Bioinformatics
, vol.23
, Issue.21
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
34
-
-
84893470948
-
Viral evolution from one generation of human influenza infection to the next
-
Riley S, Cowling BJ, Chan KH, Peiris JS, Leung GM. Viral evolution from one generation of human influenza infection to the next. Hong Kong Med J. 2013;19(Suppl 4):6-10.
-
(2013)
Hong Kong Med J
, vol.19
, pp. 6-10
-
-
Riley, S.1
Cowling, B.J.2
Chan, K.H.3
Peiris, J.S.4
Leung, G.M.5
-
36
-
-
67649327176
-
FastTree: computing large minimum evolution trees with profiles instead of a distance matrix
-
Price MN, Dehal PS, Arkin AP. FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Mol Biol Evol. 2009;26(7):1641-50.
-
(2009)
Mol Biol Evol
, vol.26
, Issue.7
, pp. 1641-1650
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
37
-
-
79961238388
-
Recommendations for examining and interpreting funnel plot asymmetry in meta-analyses of randomised controlled trials
-
Sterne JAC, Sutton AJ, Ioannidis JPA, Terrin N, Jones DR, Lau J, et al. Recommendations for examining and interpreting funnel plot asymmetry in meta-analyses of randomised controlled trials. BMJ. 2011;343:d4002.
-
(2011)
BMJ
, vol.343
, pp. d4002
-
-
Sterne, J.A.C.1
Sutton, A.J.2
Ioannidis, J.P.A.3
Terrin, N.4
Jones, D.R.5
Lau, J.6
-
38
-
-
0022377314
-
The nucleoprotein as a possible major factor in determining host specificity of influenza H3N2 viruses
-
Scholtissek C, Burger H, Kistner O, Shortridge KF. The nucleoprotein as a possible major factor in determining host specificity of influenza H3N2 viruses. Virology. 1985;147(2):287-94.
-
(1985)
Virology
, vol.147
, Issue.2
, pp. 287-294
-
-
Scholtissek, C.1
Burger, H.2
Kistner, O.3
Shortridge, K.F.4
-
39
-
-
44449164435
-
The genomic and epidemiological dynamics of human influenza A virus
-
Rambaut A, Pybus OG, Nelson MI, Viboud C, Taubenberger JK, Holmes EC. The genomic and epidemiological dynamics of human influenza A virus. Nature. 2008;453(7195):615-9.
-
(2008)
Nature
, vol.453
, Issue.7195
, pp. 615-619
-
-
Rambaut, A.1
Pybus, O.G.2
Nelson, M.I.3
Viboud, C.4
Taubenberger, J.K.5
Holmes, E.C.6
-
40
-
-
42349094829
-
The global circulation of seasonal influenza A (H3N2) viruses
-
Russell CA, Jones TC, Barr IG, Cox NJ, Garten RJ, Gregory V, et al. The global circulation of seasonal influenza A (H3N2) viruses. Science. 2008;5874:340-6.
-
(2008)
Science
, vol.5874
, pp. 340-346
-
-
Russell, C.A.1
Jones, T.C.2
Barr, I.G.3
Cox, N.J.4
Garten, R.J.5
Gregory, V.6
-
41
-
-
84879784330
-
Frequency and patterns of reassortment in natural influenza A virus infection in a reservoir host
-
Wille M, Tolf C, Avril A, Latorre-Margalef N, Wallerström S, Olsen B, et al. Frequency and patterns of reassortment in natural influenza A virus infection in a reservoir host. Virology. 2013;443(1):150-60.
-
(2013)
Virology
, vol.443
, Issue.1
, pp. 150-160
-
-
Wille, M.1
Tolf, C.2
Avril, A.3
Latorre-Margalef, N.4
Wallerström, S.5
Olsen, B.6
-
42
-
-
44949193800
-
The evolutionary genetics and emergence of avian influenza viruses in wild birds
-
Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, et al. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog. 2008;4(5):e1000076.
-
(2008)
PLoS Pathog
, vol.4
, Issue.5
, pp. e1000076
-
-
Dugan, V.G.1
Chen, R.2
Spiro, D.J.3
Sengamalay, N.4
Zaborsky, J.5
Ghedin, E.6
|