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Volumn 1268, Issue , 2015, Pages 143-157

Peptide toxicity prediction

Author keywords

Peptide; Toxicity; ToxinPred; Webserver

Indexed keywords

ADENOSINE TRIPHOSPHATE; AMINO ACID; LACTATE DEHYDROGENASE; PEPTIDE; AMINO ACIDS; PEPTIDES;

EID: 84955072212     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2285-7_7     Document Type: Article
Times cited : (103)

References (32)
  • 1
    • 84885390747 scopus 로고    scopus 로고
    • Cancer treatment using peptides: Current therapies and future prospects
    • Thundimadathil J (2012) Cancer treatment using peptides: current therapies and future prospects. J Amino Acids 2012:967347
    • (2012) J Amino Acids 2012 , pp. 967347
    • Thundimadathil, J.1
  • 2
    • 71249091175 scopus 로고    scopus 로고
    • Current trends in the clinical development of peptide therapeutics
    • Saladin PM, Zhang BD, Reichert JM (2009) Current trends in the clinical development of peptide therapeutics. IDrugs 12:779–784
    • (2009) IDrugs , vol.12 , pp. 779-784
    • Saladin, P.M.1    Zhang, B.D.2    Reichert, J.M.3
  • 5
    • 33847762337 scopus 로고    scopus 로고
    • Methods of evaluating immunotoxicity
    • Descotes J (2006) Methods of evaluating immunotoxicity. Expert Opin Drug Metab Toxicol 2:249–259
    • (2006) Expert Opin Drug Metab Toxicol , vol.2 , pp. 249-259
    • Descotes, J.1
  • 7
  • 8
    • 0036137241 scopus 로고    scopus 로고
    • ProPred: Prediction of HLA-DR binding sites
    • Singh H, Raghava GP (2001) ProPred: prediction of HLA-DR binding sites. Bioinformatics 17:1236–1237
    • (2001) Bioinformatics , vol.17 , pp. 1236-1237
    • Singh, H.1    Raghava, G.P.2
  • 9
    • 84886539142 scopus 로고    scopus 로고
    • Identifi cation of B-cell epitopes in an antigen for inducing specifi c class of antibodies
    • Gupta S, Ansari HR, Gautam A, Raghava GP (2013) Identifi cation of B-cell epitopes in an antigen for inducing specifi c class of antibodies. Biol Direct 8:27
    • (2013) Biol Direct , vol.8 , pp. 27
    • Gupta, S.1    Ansari, H.R.2    Gautam, A.3    Raghava, G.P.4
  • 10
    • 84889053011 scopus 로고    scopus 로고
    • Designing of interferon-gamma inducing MHC class-II binders
    • Dhanda SK, Vir P, Raghava GPS (2013) Designing of interferon-gamma inducing MHC class-II binders. Biol Direct 8:30
    • (2013) Biol Direct , vol.8 , pp. 30
    • Dhanda, S.K.1    Vir, P.2    Raghava, G.P.S.3
  • 11
    • 84868020147 scopus 로고    scopus 로고
    • Peptides as therapeutics with enhanced bioactivity
    • Goodwin D, Simerska P, Toth I (2012) Peptides as therapeutics with enhanced bioactivity. Curr Med Chem 19:4451–4461
    • (2012) Curr Med Chem , vol.19 , pp. 4451-4461
    • Goodwin, D.1    Simerska, P.2    Toth, I.3
  • 12
    • 66749151389 scopus 로고    scopus 로고
    • Lactate dehydrogenase leakage as a marker for apoptotic cell degradation induced by infl uenza virus infection in human fetal membrane cells
    • Uchide N, Ohyama K, Bessho T, Toyoda H (2009) Lactate dehydrogenase leakage as a marker for apoptotic cell degradation induced by infl uenza virus infection in human fetal membrane cells. Intervirology 52:164–173
    • (2009) Intervirology , vol.52 , pp. 164-173
    • Uchide, N.1    Ohyama, K.2    Bessho, T.3    Toyoda, H.4
  • 13
    • 27644544444 scopus 로고    scopus 로고
    • In vitro cytotoxicity assays: Comparison of LDH, neutral red, MTT and protein assay in hepatoma cell lines following exposure to cadmium chloride
    • Fotakis G, Timbrell JA (2006) In vitro cytotoxicity assays: comparison of LDH, neutral red, MTT and protein assay in hepatoma cell lines following exposure to cadmium chloride. Toxicol Lett 160:171–177
    • (2006) Toxicol Lett , vol.160 , pp. 171-177
    • Fotakis, G.1    Timbrell, J.A.2
  • 14
    • 0030782041 scopus 로고    scopus 로고
    • Measurement of cytotoxicity by ATP-based luminescence assay in primary cell cultures and cell lines
    • Cree IA, Andreotti PE (1997) Measurement of cytotoxicity by ATP-based luminescence assay in primary cell cultures and cell lines. Toxicol In Vitro 11:553–556
    • (1997) Toxicol In Vitro , vol.11 , pp. 553-556
    • Cree, I.A.1    Andreotti, P.E.2
  • 15
    • 0026350045 scopus 로고
    • Segmentation of sensory and sympathetic ganglia: Interactions between neural crest and somite cells
    • Kalcheim C, Goldstein RS (1991) Segmentation of sensory and sympathetic ganglia: interactions between neural crest and somite cells. J Physiol Paris 85:110–116
    • (1991) J Physiol Paris , vol.85 , pp. 110-116
    • Kalcheim, C.1    Goldstein, R.S.2
  • 16
  • 17
    • 33645420007 scopus 로고    scopus 로고
    • Development of novel LL-37 derived antimicrobial peptides with LPS and LTA neutralizing and antimicrobial activities for therapeutic application
    • Nell MJ, Tjabringa GS, Wafelman AR, Verrijk R, Hiemstra PS, Drijfhout JW, Grote JJ (2006) Development of novel LL-37 derived antimicrobial peptides with LPS and LTA neutralizing and antimicrobial activities for therapeutic application. Peptides 27:649–660
    • (2006) Peptides , vol.27 , pp. 649-660
    • Nell, M.J.1    Tjabringa, G.S.2    Wafelman, A.R.3    Verrijk, R.4    Hiemstra, P.S.5    Drijfhout, J.W.6    Grote, J.J.7
  • 18
    • 84887597873 scopus 로고    scopus 로고
    • Short antibacterial peptides with signifi cantly reduced hemolytic activity can be identifi ed by a systematic L-to-D exchange scan of their amino acid residues
    • Albada HB, Prochnow P, Bobersky S, Langklotz S, Bandow JE, Metzler-Nolte N (2013) Short antibacterial peptides with signifi cantly reduced hemolytic activity can be identifi ed by a systematic L-to-D exchange scan of their amino acid residues. ACS Comb Sci 15:585–592
    • (2013) ACS Comb Sci , vol.15 , pp. 585-592
    • Albada, H.B.1    Prochnow, P.2    Bobersky, S.3    Langklotz, S.4    Bandow, J.E.5    Metzler-nolte, N.6
  • 19
    • 0037124473 scopus 로고    scopus 로고
    • Introduction and overview of peptide and protein pegylation
    • Veronese FM, Harris JM (2002) Introduction and overview of peptide and protein pegylation. Adv Drug Deliv Rev 54:453–456
    • (2002) Adv Drug Deliv Rev , vol.54 , pp. 453-456
    • Veronese, F.M.1    Harris, J.M.2
  • 20
    • 84858797510 scopus 로고    scopus 로고
    • Design and characterization of novel hybrid antimicrobial peptides based on cecropin A, LL-37 and magainin II
    • Fox MA, Thwaite JE, Ulaeto DO, Atkins TP, Atkins HS (2012) Design and characterization of novel hybrid antimicrobial peptides based on cecropin A, LL-37 and magainin II. Peptides 33:197–205
    • (2012) Peptides , vol.33 , pp. 197-205
    • Fox, M.A.1    Thwaite, J.E.2    Ulaeto, D.O.3    Atkins, T.P.4    Atkins, H.S.5
  • 21
    • 84861133663 scopus 로고    scopus 로고
    • Pegylation of antimicrobial peptides maintains the active peptide conformation, model membrane interactions, and antimicrobial activity while improving lung tissue biocompatibility following airway delivery
    • Morris CJ, Beck K, Fox MA, Ulaeto D, Clark GC, Gumbleton M (2012) Pegylation of antimicrobial peptides maintains the active peptide conformation, model membrane interactions, and antimicrobial activity while improving lung tissue biocompatibility following airway delivery. Antimicrob Agents Chemother 56:3298–3308
    • (2012) Antimicrob Agents Chemother , vol.56 , pp. 3298-3308
    • Morris, C.J.1    Beck, K.2    Fox, M.A.3    Ulaeto, D.4    Clark, G.C.5    Gumbleton, M.6
  • 22
    • 77954952204 scopus 로고    scopus 로고
    • ATDB 2.0: A database integrated toxin-ion channel interaction data
    • He Q, Han W, He Q, Huo L, Zhang J, Lin Y, Chen P, Liang S (2010) ATDB 2.0: a database integrated toxin-ion channel interaction data. Toxicon. doi: 10.1016/j.toxicon.2010.05.013
    • (2010) Toxicon
    • He, Q.1    Han, W.2    He, Q.3    Huo, L.4    Zhang, J.5    Lin, Y.6    Chen, P.7    Liang, S.8
  • 23
    • 84861904854 scopus 로고    scopus 로고
    • VFDB 2012 update: Toward the genetic diversity and molecular evolution of bacterial virulence factors
    • Chen L, Xiong Z, Sun L, Yang J, Jin Q (2012) VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors. Nucleic Acids Res 40:D641–D645
    • (2012) Nucleic Acids Res , vol.40 , pp. D641-D645
    • Chen, L.1    Xiong, Z.2    Sun, L.3    Yang, J.4    Jin, Q.5
  • 25
    • 84862180786 scopus 로고    scopus 로고
    • ConoServer: Updated content, knowledge, and discovery tools in the conopeptide database
    • Kaas Q, Yu R, Jin A-H, Dutertre S, Craik DJ (2012) ConoServer: updated content, knowledge, and discovery tools in the conopeptide database. Nucleic Acids Res 40:D325–D330
    • (2012) Nucleic Acids Res , vol.40 , pp. D325-D330
    • Kaas, Q.1    Yu, R.2    Jin, A.-H.3    Dutertre, S.4    Craik, D.J.5
  • 26
    • 9144232912 scopus 로고    scopus 로고
    • UniProt: The Universal Protein knowledgebase
    • Apweiler R, Bairoch A, Wu CH et al (2004) UniProt: the Universal Protein knowledgebase. Nucleic Acids Res 32:D115–D119
    • (2004) Nucleic Acids Res , vol.32 , pp. D115-D119
    • Apweiler, R.1    Bairoch, A.2    Wu, C.H.3
  • 27
    • 67849092447 scopus 로고    scopus 로고
    • ClanTox: A classifi er of short animal toxins
    • Naamati G, Askenazi M, Linial M (2009) ClanTox: a classifi er of short animal toxins. Nucleic Acids Res 37:W363–W368
    • (2009) Nucleic Acids Res , vol.37 , pp. W363-W368
    • Naamati, G.1    Askenazi, M.2    Linial, M.3
  • 28
    • 38949127261 scopus 로고    scopus 로고
    • BTXpred: Prediction of bacterial toxins
    • Saha S, Raghava GPS (2007) BTXpred: prediction of bacterial toxins. In Silico Biol 7:405–412
    • (2007) Silico Biol , vol.7 , pp. 405-412
    • Saha, S.1    Raghava, G.P.S.2
  • 29
    • 37249045159 scopus 로고    scopus 로고
    • Prediction of neurotoxins based on their function and source
    • Saha S, Raghava GPS (2007) Prediction of neurotoxins based on their function and source. In Silico Biol 7:369–387
    • (2007) Silico Biol , vol.7 , pp. 369-387
    • Saha, S.1    Raghava, G.P.S.2
  • 30
    • 33645715647 scopus 로고    scopus 로고
    • VICMpred: An SVM-based method for the prediction of functional proteins of Gram-negative bacteria using amino acid patterns and composition
    • Saha S, Raghava GPS (2006) VICMpred: an SVM-based method for the prediction of functional proteins of Gram-negative bacteria using amino acid patterns and composition. Genomics Proteomics Bioinformatics 4:42–47
    • (2006) Genomics Proteomics Bioinformatics , vol.4 , pp. 42-47
    • Saha, S.1    Raghava, G.P.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.