Relaxed observance of traditional marriage rules allows social connectivity without loss of genetic diversity

Molecular Biology and Evolution

Volumn 32, Issue 9, 2015, Pages 2254-2262

  Guillot, Elsa G ^a   Hazelton, Martin L ^a   Karafet, Tatiana M ^b   Stephen Lansing, J ^c   Sudoyo, Herawati ^d   Cox, Murray P ^a  

^a MASSEY UNIVERSITY   (New Zealand)

^b UNIVERSITY OF ARIZONA   (United States)

^c NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

^d EIJKMAN INSTITUTE FOR MOLECULAR BIOLOGY   (Indonesia)

Author keywords

Approximate Bayesian Computation; Asymmetric Prescriptive Alliance; Genetic diversity; Indonesia; Mating systems

Indexed keywords

MITOCHONDRIAL DNA;

ANTHROPOLOGY; ARTICLE; ASSESSMENT OF HUMANS; ASYMMETRIC PRESCRIPTIVE ALLIANCE; AUTOSOME; BIODIVERSITY; COMMUNITY; COMPUTER SIMULATION; CONSANGUINEOUS MARRIAGE; CONTROLLED STUDY; GENETIC ASSOCIATION; GENETIC REASSORTMENT; GENETIC VARIABILITY; GENOME; HUMAN; HUMAN EXPERIMENT; INDONESIAN; MARRIAGE; MATING SYSTEM; NORMAL HUMAN; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; SOCIAL INTERACTION; SOCIAL STRUCTURE; SOCIETY; X CHROMOSOME; BIOLOGICAL MODEL; CULTURAL ANTHROPOLOGY; FEMALE; GENETIC VARIATION; MALE;

CULTURE; FEMALE; GENETIC VARIATION; HUMANS; MALE; MARRIAGE; MODELS, GENETIC;

EID: 84954182627     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msv102     Document Type: Article

References (56)

1. Achaz G. 2009. Frequency spectrum neutrality tests: one for all and all for one. Genetics 183(1):249-258.
2. Ackerman C. 1964. Structure and statistics: the Purum case. Am Anthropol. 66(1):53-65.
3. Beatty A. 1990. Asymmetric alliance in Nias, Indonesia. Man 25(3):454-471.
4. Beaumont MA, Nielsen R, Robert C, Hey J, Knowles L, Hickerson M, Scott A. 2010. In defence of model-based inference in phylogeogra-phy. Mol Ecol. 19:436-446.
5. Beaumont MA, Zhang W, Balding DJ. 2002. Approximate Bayesian computation in population genetics. Genetics 162:2025-2035.
6. Billari F, Fent T, Prskawetz A, Aparicio Diaz B. 2007. The "Wedding-Ring": an agent based model based on social interaction. Demogr Res. 17:59-82.
7. Chaix R, Quintana-Murci L, Hegay T, Hammer MF, Mobasher Z, Austerlitz F, Heyer E. 2007. From social to genetic structures in central Asia. Curr Biol. 17(1):43-48.
8. Clark AG, Hubisz MJ, Bustamante CD, Williamson SH. 2005. Ascertainment bias in studies of human genome-wide polymorphism. Genome Res. 15:1496-1502.
9. Cox MP, Karafet TM, Lansing JS, Sudoyo H, Hammer MF. 2010. Autosomal and X-linked single nucleotide polymorphisms reveal a steep Asian-Melanesian ancestry cline in eastern Indonesia and a sex bias in admixture rates. Proc R Soc Lond B Biol Sci. 277(1687):1589-1596.
10. Csillery K, Francois O, Blum MGB. 2012. abc: an R package for approximate Bayesian computation (ABC). Methods Ecol Evol. 3:475-479.
11. Fenner JN. 2005. Cross-cultural estimation of the human generation interval for use in genetics-based population divergence studies. Am J Phys Anthropol. 128:415-423.
12. Forth GL. 1990. From symmetry to asymmetry. An evolutionary interpretation of eastern Sumbanese relationship terminology. Anthropos 85(4):373-392.
13. Forth GL. 2009. Human beings and other people. Bijdr Taal Land Volkenkd. 165(4):493-514.
14. Forth GL. 1981. Rindi: an ethnographic study of a traditional domain in eastern Sumba. The Hague (The Netherlands): Kininklijk Instituut voor Taal-, Land-en Volkenkude.
15. Fredlund EV. 1976. Measuring marriage preference. Ethnology 15(1):35-45.
16. Gilbert JP, Hammel EA. 1966. Computer simulation and analysis of problems in kinship and social structure. Am Anthropol. 68:71-93.
17. Guillot EG, Cox MP. 2014. SMARTPOP: inferring the impact of social dynamics on genetic diversity through high speed simulations. BMC Bioinformatics 15:175.
18. Guillot EG, Tumonggor MK, Lansing JS, Sudoyo H, Cox MP. 2013. Climate change influenced female population sizes through time across the Indonesian archipelago. Hum Biol. 85(1-3):135-152.
19. Hammer MF, Mendez FL, Cox MP, Woerner AE, Wall JD. 2008. Sex-biased evolutionary forces shape genomic patterns of human diversity. PLoS Genet. 4(9):8.
20. Hastie TJ, Tibshirani RJ. 1990. Generalized additive models. London: CRC Press.
21. Henrich J, Boyd R, Richerson PJ. 2012. The puzzle of monogamous marriage. Philos Trans R Soc Lond B Biol Sci. 367:657-669.
22. Heyer E, Chaix R Pavard S, Austerlitz F. 2012. Sex-specific demographic behaviours that shape human genomic variation. Mol Ecol. 21(3)597-612.
23. Huber BR Danaher WF, Breedlove WL 2011. New cross-cultural perspectives on marriage transactions. Cross Cult Res. 45(4): 339-375.
24. Jacquard A 1967. La reproduction humaine en regime malthusien. Un modele de simulation par la methode de Monte-Carlo. Population 22(5):897-920.
25. Jacquard A 1970. Panmixie et structure des familles. Population 25(1):69-76.
26. Kingman JFC 1982. The coalescent Stoch Process Appl. 13(3):235-248.
27. Kunstadter P, Buhler R Stephan FF, Westoff CF. 1963. Demographic variability and preferential marriage patterns. Am J Phys Anthropol. 21(4)511-519.
28. Lansing JS. 2006. Perfect order: recognizing complexity in Bali. Princeton (NJ): Princeton University Press.
29. Lansing JS, Cox MP, De Vet TA, Downey S, Hallmark B, Sudoyo H. 2011. An ongoing Austronesian expansion in Island Southeast Asia. J Anthropol Archaeol. 30(3):262-272.
30. Lansing JS, Watkins JC, Hallmark B, Cox MP, Karafet TM, Sudoyo H, Hammer MF. 2008. Male dominance rarely skews the frequency distribution of Y chromosome haplotypes in human populations. Proc Natl Acad Sci USA. 105(33):11645-11650.
31. Levi-Strauss C 1949. Les Structures Elementaires de la Parente. Paris: PUF.
32. Levi-Strauss C 1965. The future of kinship studies. Proceedings of the Royal Anthropological Institute of Great Britain and Ireland, 1965: 13-22.
33. Lynch M. 2010. Rate, molecular spectrum, and consequences of human mutation. Proc Natl Acad Sci USA. 107(3):961-968.
34. MacCluer JW, Neel JV, Chagnon NA 1971. Demographic structure of a primitive population: a simulation. Am J Phys Anthropol. 35(2):193-207.
35. Marlowe FW. 2003. The mating system of foragers in the standard cross-cultural sample. Cross Cult Res. 37(3):282-306.
36. Mascie-Taylor N, Boyce AJ. 1988. Human mating patterns. Cambridge: Cambridge University Press.
37. Maybury-Lewis DHP. 1965. Prescriptive marriage systems. Southwest J Anthropol. 21(3):207-230.
38. McFarland DD 1970. Effects of group size on the availability of marriage partners. Demography 7(4):475-476.
39. Moorad JA, Promislow DE, Smith KR Wade MJ. 2011. Mating system change reduces the strength of sexual selection in an American frontier population of the 19th century. Evol Hum Behav. 32(2):147-155.
40. Needham R 1964. Descent, category, and alliance in Siriono society. Southwest J Anthropol. 20(3):229-240.
41. Needham R Elkin AP. 1973. Prescription. Oceania 43(3):166-181.
42. Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89(3)583-590.
43. Nunes M, Prangle D 2015. abctools: tools for ABC analyses. Available from: http://cran.r-project.org/web/packages/abctools/indexhtml
44. Ober C, Hyslop T, Hauck WW. 1999. Inbreeding effects on fertility in humans: evidence for reproductive compensation. Am J Hum Genet 64(1):225-231.
45. Scally A, Durbin R 2012. Revising the human mutation rate: implications for understanding human evolution. Genetics 13:745-753.
46. Segurel L, Martinez-Cruz B, Quintana-Murci L, Balaresque P, Georges M, Hegay T, Aldashev A, Nasyrova F, Jobling MA Heyer E, et al. 2008. Sex-specific genetic structure and social organization in Central Asia: insights from a multi-locus study. PLoS Genet 4(9):14.
47. Smouse PE, Vitzthum VJ, Neel JV. 1981. The impact of random and lineal fission on the genetic divergence of small human groups: a case study among the Yanomama. Genetics 98:179-197.
48. Soares P, Ermini L, Thomson N, Mormina M, Rito T, Rohl A, Salas A Oppenheimer S, Macaulay V, Richards MB. 2009. Correcting for purifying selection: an improved human mitochondrial molecular clock. Am J Hum Genet. 84(6):740-759.
49. Sunnaker M, Busetto AG, Numminen E, Corander J, Foll M, Dessimoz C 2013. Approximate Bayesian computation. PLoS Comput Biol. 9(1):e1002803.
50. Tumonggor MK, Karafet TM, Hallmark B, Lansing JS, Sudoyo H, Hammer MF, Cox MP. 2013. The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific. J Hum Genet 58(3):165-173.
51. Van Wouden FAE. 1935. Sociale Structuurtypen in de Groote Oost. Leiden (The Netherlands): Ginsberg.
52. Verdu P, Becker NSA, Froment A, Georges M, Grugni V, Quintana-Murci L, Hombert J-M, Van der Veen L, Le Bomin S, Bahuchet S, et al. 2013. Sociocultural behavior, sex-biased admixture, and effective population sizes in Central African Pygmies and non-Pygmies. Mol Biol Evol. 30(4):918-937.
53. Watkins JC. 2004. The role of marriage rules in the structure of genetic relatedness. Theor Popul Biol. 66(1):13-24.
54. Winata S, Arhya IN, Moeljopawiro S, Hinnant JT, Liang Y, Friedman TB, Asher JH Jr. 1995. Congenital non-syndromal autosomal recessive deafness in Bengkala, an isolated Balinese village. J Med Genet. 32:336-343.
55. Winterhalder B, Smith EA. 2000. Analyzing adaptive strategies: human behavioral ecology at twenty-five. Evol Anthropol. 9(2):51-72.
56. Wood SN. 2011. Fast stable restricted maximum likelihood and marginal likelihood estimation of semiparametric generalized linear models. J R Stat Soc B. 73(1):3-36.