메뉴 건너뛰기




Volumn 11, Issue 1, 2016, Pages

Epigenetic segregation of microbial genomes from complex samples using restriction endonucleases hpaii and McrB

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; RESTRICTION ENDONUCLEASE; RESTRICTION ENDONUCLEASE MCRB; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE; UNCLASSIFIED DRUG; 5 METHYLCYTOSINE; BACTERIAL DNA; ESCHERICHIA COLI PROTEIN; FUNGAL DNA; MCRB PROTEIN, E COLI; PLANT DNA; PROTOZOAL DNA; VIRUS DNA;

EID: 84954072795     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0146064     Document Type: Article
Times cited : (7)

References (45)
  • 1
    • 84858439578 scopus 로고    scopus 로고
    • The human microbiome: At the interface of health and disease
    • 22411464 PubMed Central PMCID: PMC3418802
    • Cho I, Blaser MJ. The human microbiome: at the interface of health and disease. Nature reviews Genetics. 2012; 13(4):260-70. doi: 10.1038/nrg3182 PMID: 22411464; PubMed Central PMCID: PMC3418802.
    • (2012) Nature Reviews Genetics , vol.13 , Issue.4 , pp. 260-270
    • Cho, I.1    Blaser, M.J.2
  • 2
    • 84952872101 scopus 로고    scopus 로고
    • The human microbiota: The rise of an "empire"
    • 25973270 PubMed Central PMCID: PMC4422457
    • Berger G, Bitterman R, Azzam ZS. The human microbiota: the rise of an "empire". Rambam Maimonides medical journal. 2015; 6(2):e0018. doi: 10.5041/RMMJ.10202 PMID: 25973270; PubMed Central PMCID: PMC4422457.
    • (2015) Rambam Maimonides Medical Journal , vol.6 , Issue.2
    • Berger, G.1    Bitterman, R.2    Azzam, Z.S.3
  • 3
    • 85044695622 scopus 로고    scopus 로고
    • Cancer and the microbiota
    • 25838377
    • Garrett WS. Cancer and the microbiota. Science. 2015; 348(6230):80-6. doi: 10.1126/science. aaa4972 PMID: 25838377.
    • (2015) Science , vol.348 , Issue.6230 , pp. 80-86
    • Garrett, W.S.1
  • 4
  • 6
    • 84893041172 scopus 로고    scopus 로고
    • Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis
    • 24478471 PubMed Central PMCID: PMC3911355
    • Lim YW, Evangelista JS 3rd, Schmieder R, Bailey B, Haynes M, Furlan M, et al. Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis. Journal of clinical microbiology. 2014; 52(2):425-37. doi: 10.1128/JCM.02204-13 PMID: 24478471; PubMed Central PMCID: PMC3911355.
    • (2014) Journal of Clinical Microbiology. , vol.52 , Issue.2 , pp. 425-437
    • Lim, Y.W.1    Evangelista, J.S.2    Schmieder, R.3    Bailey, B.4    Haynes, M.5    Furlan, M.6
  • 7
    • 84925723187 scopus 로고    scopus 로고
    • Clinical detection and characterization of bacterial pathogens in the genomics era
    • 25593594 PubMed Central PMCID: PMC4295418
    • Fournier PE, Dubourg G, Raoult D. Clinical detection and characterization of bacterial pathogens in the genomics era. Genome Med. 2014; 6(11):114. doi: 10.1186/s13073-014-0114-2 PMID: 25593594; PubMed Central PMCID: PMC4295418.
    • (2014) Genome Med. , vol.6 , Issue.11 , pp. 114
    • Fournier, P.E.1    Dubourg, G.2    Raoult, D.3
  • 8
    • 84875921666 scopus 로고    scopus 로고
    • A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4
    • 23571589
    • Loman NJ, Constantinidou C, Christner M, Rohde H, Chan JZ, Quick J, et al. A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4. JAMA. 2013; 309(14):1502-10. doi: 10.1001/jama.2013.3231 PMID: 23571589.
    • (2013) JAMA , vol.309 , Issue.14 , pp. 1502-1510
    • Loman, N.J.1    Constantinidou, C.2    Christner, M.3    Rohde, H.4    Chan, J.Z.5    Quick, J.6
  • 9
    • 84891529869 scopus 로고    scopus 로고
    • Rapid whole-genome sequencing for detection and characterization of microorganisms directly from clinical samples
    • 24172157 PubMed Central PMCID: PMC3911411
    • Hasman H, Saputra D, Sicheritz-Ponten T, Lund O, Svendsen CA, Frimodt-Moller N, et al. Rapid whole-genome sequencing for detection and characterization of microorganisms directly from clinical samples. Journal of clinical microbiology. 2014; 52(1):139-46. doi: 10.1128/JCM.02452-13 PMID: 24172157; PubMed Central PMCID: PMC3911411.
    • (2014) Journal of Clinical Microbiology. , vol.52 , Issue.1 , pp. 139-146
    • Hasman, H.1    Saputra, D.2    Sicheritz-Ponten, T.3    Lund, O.4    Svendsen, C.A.5    Frimodt-Moller, N.6
  • 10
    • 84867800804 scopus 로고    scopus 로고
    • From genotype to phenotype: Can systems biology be used to predict Staphylococcus aureus virulence?
    • 23070558
    • Priest NK, Rudkin JK, Feil EJ, van den Elsen JM, Cheung A, Peacock SJ, et al. From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence? Nat Rev Microbiol. 2012; 10(11):791-7. doi: 10.1038/nrmicro2880 PMID: 23070558.
    • (2012) Nat Rev Microbiol. , vol.10 , Issue.11 , pp. 791-797
    • Priest, N.K.1    Rudkin, J.K.2    Feil, E.J.3    Van Den Elsen, J.M.4    Cheung, A.5    Peacock, S.J.6
  • 11
    • 18244423402 scopus 로고    scopus 로고
    • Molecular basis of intrinsic macrolide resistance in the Mycobacterium tuberculosis complex
    • 14693532 PubMed Central PMCID: PMC310192
    • Buriankova K, Doucet-Populaire F, Dorson O, Gondran A, Ghnassia JC, Weiser J, et al. Molecular basis of intrinsic macrolide resistance in the Mycobacterium tuberculosis complex. Antimicrob Agents Chemother. 2004; 48(1):143-50. PMID: 14693532; PubMed Central PMCID: PMC310192.
    • (2004) Antimicrob Agents Chemother , vol.48 , Issue.1 , pp. 143-150
    • Buriankova, K.1    Doucet-Populaire, F.2    Dorson, O.3    Gondran, A.4    Ghnassia, J.C.5    Weiser, J.6
  • 12
    • 84953343431 scopus 로고    scopus 로고
    • Selective microbial genomic DNA isolation using restriction endonucleases
    • 25279840 PubMed Central PMCID: PMC4184833
    • Barnes HE, Liu G, Weston CQ, King P, Pham LK, Waltz S, et al. Selective microbial genomic DNA isolation using restriction endonucleases. PloS one. 2014; 9(10):e109061. doi: 10.1371/journal.pone. 0109061 PMID: 25279840; PubMed Central PMCID: PMC4184833.
    • (2014) PloS One. , vol.9 , Issue.10
    • Barnes, H.E.1    Liu, G.2    Weston, C.Q.3    King, P.4    Pham, L.K.5    Waltz, S.6
  • 13
    • 84886624088 scopus 로고    scopus 로고
    • A method for selectively enriching microbial DNA from contaminating vertebrate host DNA
    • 24204593 PubMed Central PMCID: PMC3810253
    • Feehery GR, Yigit E, Oyola SO, Langhorst BW, Schmidt VT, Stewart FJ, et al. A method for selectively enriching microbial DNA from contaminating vertebrate host DNA. PloS one. 2013; 8(10):e76096. doi: 10.1371/journal.pone.0076096 PMID: 24204593; PubMed Central PMCID: PMC3810253.
    • (2013) PloS One. , vol.8 , Issue.10
    • Feehery, G.R.1    Yigit, E.2    Oyola, S.O.3    Langhorst, B.W.4    Schmidt, V.T.5    Stewart, F.J.6
  • 14
    • 77449127799 scopus 로고    scopus 로고
    • MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome
    • 19906696 PubMed Central PMCID: PMC2811030
    • Serre D, Lee BH, Ting AH. MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome. Nucleic acids research. 2010; 38 (2):391-9. doi: 10.1093/nar/gkp992 PMID: 19906696; PubMed Central PMCID: PMC2811030.
    • (2010) Nucleic Acids Research. , vol.38 , Issue.2 , pp. 391-399
    • Serre, D.1    Lee, B.H.2    Ting, A.H.3
  • 15
    • 84877052914 scopus 로고    scopus 로고
    • Entering the era of bacterial epigenomics with single molecule real time DNA sequencing
    • 23434113 PubMed Central PMCID: PMC3646917
    • Davis BM, Chao MC, Waldor MK. Entering the era of bacterial epigenomics with single molecule real time DNA sequencing. Current opinion in microbiology. 2013; 16(2):192-8. doi: 10.1016/j.mib.2013.01. 011 PMID: 23434113; PubMed Central PMCID: PMC3646917.
    • (2013) Current Opinion in Microbiology. , vol.16 , Issue.2 , pp. 192-198
    • Davis, B.M.1    Chao, M.C.2    Waldor, M.K.3
  • 16
    • 84870880581 scopus 로고    scopus 로고
    • Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing
    • 23138224 PubMed Central PMCID: PMC3879109
    • Fang G, Munera D, Friedman DI, Mandlik A, Chao MC, Banerjee O, et al. Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nature biotechnology. 2012; 30(12):1232-9. doi: 10.1038/nbt.2432 PMID: 23138224; PubMed Central PMCID: PMC3879109.
    • (2012) Nature Biotechnology. , vol.30 , Issue.12 , pp. 1232-1239
    • Fang, G.1    Munera, D.2    Friedman, D.I.3    Mandlik, A.4    Chao, M.C.5    Banerjee, O.6
  • 17
    • 84930626765 scopus 로고    scopus 로고
    • The complete methylome of Helicobacter pylori UM032
    • 26031894 PubMed Central PMCID: PMC4450513
    • Lee WC, Anton BP, Wang S, Baybayan P, Singh S, Ashby M, et al. The complete methylome of Helicobacter pylori UM032. BMC genomics. 2015; 16:424. doi: 10.1186/s12864-015-1585-2 PMID: 26031894; PubMed Central PMCID: PMC4450513.
    • (2015) BMC Genomics. , vol.16 , pp. 424
    • Lee, W.C.1    Anton, B.P.2    Wang, S.3    Baybayan, P.4    Singh, S.5    Ashby, M.6
  • 18
    • 84867319588 scopus 로고    scopus 로고
    • The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine
    • 22570415 PubMed Central PMCID: PMC3424535
    • Sukackaite R, Grazulis S, Tamulaitis G, Siksnys V. The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine. Nucleic acids research. 2012; 40(15):7552-62. doi: 10. 1093/nar/gks332 PMID: 22570415; PubMed Central PMCID: PMC3424535.
    • (2012) Nucleic Acids Research , vol.40 , Issue.15 , pp. 7552-7562
    • Sukackaite, R.1    Grazulis, S.2    Tamulaitis, G.3    Siksnys, V.4
  • 19
    • 0029000684 scopus 로고
    • McrB: A prokaryotic protein specifically recognizing DNA containing modified cytosine residues
    • 7781618 Epub 1995/06/01
    • Kruger T, Wild C, Noyer-Weidner M. McrB: a prokaryotic protein specifically recognizing DNA containing modified cytosine residues. EMBO J. 1995; 14(11):2661-9. Epub 1995/06/01. PMID: 7781618.
    • (1995) EMBO J. , vol.14 , Issue.11 , pp. 2661-2669
    • Kruger, T.1    Wild, C.2    Noyer-Weidner, M.3
  • 21
    • 58149200954 scopus 로고    scopus 로고
    • Database resources of the National Center for Biotechnology Information
    • 18940862 PubMed Central PMCID: PMC2686545
    • Sayers EW, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, et al. Database resources of the National Center for Biotechnology Information. Nucleic acids research. 2009; 37(Database issue): D5-15. doi: 10.1093/nar/gkn741 PMID: 18940862; PubMed Central PMCID: PMC2686545.
    • (2009) Nucleic Acids Research. , vol.37 , Issue.DATABASE ISSUE , pp. D5-15
    • Sayers, E.W.1    Barrett, T.2    Benson, D.A.3    Bryant, S.H.4    Canese, K.5    Chetvernin, V.6
  • 22
    • 0019322245 scopus 로고
    • DNA methylation and the frequency of CpG in animal DNA
    • 6253938 PubMed Central PMCID: PMC324012
    • Bird AP. DNA methylation and the frequency of CpG in animal DNA. Nucleic acids research. 1980; 8 (7):1499-504. PMID: 6253938; PubMed Central PMCID: PMC324012.
    • (1980) Nucleic Acids Research. , vol.8 , Issue.7 , pp. 1499-1504
    • Bird, A.P.1
  • 23
    • 84929431366 scopus 로고    scopus 로고
    • Genome Modification in Enterococcus faecalis OG1RF Assessed by Bisulfite Sequencing and Single-Molecule Real-Time Sequencing
    • 25825433 PubMed Central PMCID: PMC4420909
    • Huo W, Adams HM, Zhang MQ, Palmer KL. Genome Modification in Enterococcus faecalis OG1RF Assessed by Bisulfite Sequencing and Single-Molecule Real-Time Sequencing. Journal of bacteriology. 2015; 197(11):1939-51. doi: 10.1128/JB.00130-15 PMID: 25825433; PubMed Central PMCID: PMC4420909.
    • (2015) Journal of Bacteriology. , vol.197 , Issue.11 , pp. 1939-1951
    • Huo, W.1    Adams, H.M.2    Zhang, M.Q.3    Palmer, K.L.4
  • 24
    • 57349152190 scopus 로고    scopus 로고
    • In vitro CpG methylation increases the transformation efficiency of Borrelia burgdorferi strains harboring the endogenous linear plasmid lp56
    • 18849429 PubMed Central PMCID: PMC2593207
    • Chen Q, Fischer JR, Benoit VM, Dufour NP, Youderian P, Leong JM. In vitro CpG methylation increases the transformation efficiency of Borrelia burgdorferi strains harboring the endogenous linear plasmid lp56. Journal of bacteriology. 2008; 190(24):7885-91. doi: 10.1128/JB.00324-08 PMID: 18849429; PubMed Central PMCID: PMC2593207.
    • (2008) Journal of Bacteriology. , vol.190 , Issue.24 , pp. 7885-7891
    • Chen, Q.1    Fischer, J.R.2    Benoit, V.M.3    Dufour, N.P.4    Youderian, P.5    Leong, J.M.6
  • 26
    • 49649120660 scopus 로고    scopus 로고
    • A cytosine methyltransferase homologue is essential for sexual development in Aspergillus nidulans
    • 18575630 PubMed Central PMCID: PMC2432034
    • Lee DW, Freitag M, Selker EU, Aramayo R. A cytosine methyltransferase homologue is essential for sexual development in Aspergillus nidulans. PloS one. 2008; 3(6):e2531. doi: 10.1371/journal.pone. 0002531 PMID: 18575630; PubMed Central PMCID: PMC2432034.
    • (2008) PloS One. , vol.3 , Issue.6
    • Lee, D.W.1    Freitag, M.2    Selker, E.U.3    Aramayo, R.4
  • 27
    • 84856062466 scopus 로고    scopus 로고
    • Bisulfite sequencing reveals that Aspergillus flavus holds a hollow in DNA methylation
    • 22276181 PubMed Central PMCID: PMC3262820
    • Liu SY, Lin JQ, Wu HL, Wang CC, Huang SJ, Luo YF, et al. Bisulfite sequencing reveals that Aspergillus flavus holds a hollow in DNA methylation. PloS one. 2012; 7(1):e30349. doi: 10.1371/journal.pone. 0030349 PMID: 22276181; PubMed Central PMCID: PMC3262820.
    • (2012) PloS One. , vol.7 , Issue.1
    • Liu, S.Y.1    Lin, J.Q.2    Wu, H.L.3    Wang, C.C.4    Huang, S.J.5    Luo, Y.F.6
  • 28
    • 79961081499 scopus 로고    scopus 로고
    • DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans
    • 21730141 PubMed Central PMCID: PMC3141964
    • Mishra PK, Baum M, Carbon J. DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans. Proceedings of the National Academy of Sciences of the United States of America. 2011; 108(29):11965-70. doi: 10.1073/pnas.1109631108 PMID: 21730141; PubMed Central PMCID: PMC3141964.
    • (2011) Proceedings of the National Academy of Sciences of the United States of America. , vol.108 , Issue.29 , pp. 11965-11970
    • Mishra, P.K.1    Baum, M.2    Carbon, J.3
  • 29
    • 84927015384 scopus 로고    scopus 로고
    • New developments in Cryptosporidium research
    • 25769247 Epub 2015/03/15. S0020-7519(15)00047-8 [pii]
    • Ryan U, Hijjawi N. New developments in Cryptosporidium research. Int J Parasitol. 45(6):367-73. Epub 2015/03/15. S0020-7519(15)00047-8 [pii] doi: 10.1016/j.ijpara.2015.01.009 PMID: 25769247.
    • Int J Parasitol. , vol.45 , Issue.6 , pp. 367-373
    • Ryan, U.1    Hijjawi, N.2
  • 30
    • 40949110918 scopus 로고    scopus 로고
    • Toxoplasma gondii and Cryptosporidium parvum lack detectable DNA cytosine methylation
    • 18178772 Epub 2008/01/08. EC.00448-07 [pii]
    • Gissot M, Choi SW, Thompson RF, Greally JM, Kim K. Toxoplasma gondii and Cryptosporidium parvum lack detectable DNA cytosine methylation. Eukaryot Cell. 2008; 7(3):537-40. Epub 2008/01/08. EC.00448-07 [pii] doi: 10.1128/EC.00448-07 PMID: 18178772.
    • (2008) Eukaryot Cell. , vol.7 , Issue.3 , pp. 537-540
    • Gissot, M.1    Choi, S.W.2    Thompson, R.F.3    Greally, J.M.4    Kim, K.5
  • 31
    • 84921709332 scopus 로고    scopus 로고
    • Isolation and enrichment of Cryptosporidium DNA and verification of DNA purity for whole-genome sequencing
    • 25520441 Epub 2014/12/19. JCM.02962-14 [pii]
    • Guo Y, Li N, Lysen C, Frace M, Tang K, Sammons S, et al. Isolation and enrichment of Cryptosporidium DNA and verification of DNA purity for whole-genome sequencing. Journal of clinical microbiology. 53 (2):641-7. Epub 2014/12/19. JCM.02962-14 [pii] doi: 10.1128/JCM.02962-14 PMID: 25520441.
    • Journal of Clinical Microbiology , vol.53 , Issue.2 , pp. 641-647
    • Guo, Y.1    Li, N.2    Lysen, C.3    Frace, M.4    Tang, K.5    Sammons, S.6
  • 32
    • 44349107704 scopus 로고    scopus 로고
    • Presence and role of cytosine methylation in DNA viruses of animals
    • 18367473 PubMed Central PMCID: PMC2396429
    • Hoelzer K, Shackelton LA, Parrish CR. Presence and role of cytosine methylation in DNA viruses of animals. Nucleic acids research. 2008; 36(9):2825-37. doi: 10.1093/nar/gkn121 PMID: 18367473; PubMed Central PMCID: PMC2396429.
    • (2008) Nucleic Acids Research. , vol.36 , Issue.9 , pp. 2825-2837
    • Hoelzer, K.1    Shackelton, L.A.2    Parrish, C.R.3
  • 33
    • 84923628847 scopus 로고    scopus 로고
    • Mining for viral fragments in methylation enriched sequencing data
    • 25699076 PubMed Central PMCID: PMC4316777
    • Mensaert K, Van Criekinge W, Thas O, Schuuring E, Steenbergen RD, Wisman GB, et al. Mining for viral fragments in methylation enriched sequencing data. Frontiers in genetics. 2015; 6:16. doi: 10. 3389/fgene.2015.00016 PMID: 25699076; PubMed Central PMCID: PMC4316777.
    • (2015) Frontiers in Genetics. , vol.6 , pp. 16
    • Mensaert, K.1    Van Criekinge, W.2    Thas, O.3    Schuuring, E.4    Steenbergen, R.D.5    Wisman, G.B.6
  • 35
    • 84946605924 scopus 로고    scopus 로고
    • Genome and metagenome sequencing: Using the human methyl-binding domain to partition genomic DNA derived from plant tissues
    • 25383266 PubMed Central PMCID: PMC4222543
    • Yigit E, Hernandez DI, Trujillo JT, Dimalanta E, Bailey CD. Genome and metagenome sequencing: Using the human methyl-binding domain to partition genomic DNA derived from plant tissues. Appl Plant Sci. 2014; 2(11). doi: 10.3732/apps.1400064 PMID: 25383266; PubMed Central PMCID: PMC4222543.
    • (2014) Appl Plant Sci. , vol.2 , Issue.11
    • Yigit, E.1    Hernandez, D.I.2    Trujillo, J.T.3    Dimalanta, E.4    Bailey, C.D.5
  • 36
    • 77952355762 scopus 로고    scopus 로고
    • Genome-wide evolutionary analysis of eukaryotic DNA methylation
    • 20395474
    • Zemach A, McDaniel IE, Silva P, Zilberman D. Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science. 2010; 328(5980):916-9. doi: 10.1126/science.1186366 PMID: 20395474.
    • (2010) Science. , vol.328 , Issue.5980 , pp. 916-919
    • Zemach, A.1    McDaniel, I.E.2    Silva, P.3    Zilberman, D.4
  • 37
    • 40749109894 scopus 로고    scopus 로고
    • Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
    • 18278030 PubMed Central PMCID: PMC2377394
    • Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature. 2008; 452(7184):215-9. doi: 10.1038/nature06745 PMID: 18278030; PubMed Central PMCID: PMC2377394.
    • (2008) Nature. , vol.452 , Issue.7184 , pp. 215-219
    • Cokus, S.J.1    Feng, S.2    Zhang, X.3    Chen, Z.4    Merriman, B.5    Haudenschild, C.D.6
  • 38
    • 34548299554 scopus 로고    scopus 로고
    • Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation
    • 17803908
    • Mathieu O, Reinders J, Caikovski M, Smathajitt C, Paszkowski J. Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation. Cell. 2007; 130(5):851-62. doi: 10.1016/j.cell. 2007.07.007 PMID: 17803908.
    • (2007) Cell. , vol.130 , Issue.5 , pp. 851-862
    • Mathieu, O.1    Reinders, J.2    Caikovski, M.3    Smathajitt, C.4    Paszkowski, J.5
  • 39
    • 79957545864 scopus 로고    scopus 로고
    • DNA methylation systems and targets in plants
    • 20727353
    • Meyer P. DNA methylation systems and targets in plants. FEBS letters. 2011; 585(13):2008-15. doi: 10.1016/j.febslet.2010.08.017 PMID: 20727353.
    • (2011) FEBS Letters. , vol.585 , Issue.13 , pp. 2008-2015
    • Meyer, P.1
  • 40
    • 84891522635 scopus 로고    scopus 로고
    • How to interpret methylation sensitive amplified polymorphism (MSAP) profiles?
    • 24393618 PubMed Central PMCID: PMC3890580
    • Fulnecek J, Kovarik A. How to interpret methylation sensitive amplified polymorphism (MSAP) profiles? BMC genetics. 2014; 15:2. doi: 10.1186/1471-2156-15-2 PMID: 24393618; PubMed Central PMCID: PMC3890580.
    • (2014) BMC Genetics. , vol.15 , pp. 2
    • Fulnecek, J.1    Kovarik, A.2
  • 41
    • 0017570818 scopus 로고
    • Specificity of Hpa II and Hae III DNA methylases
    • 600794 PubMed Central PMCID: PMC343235
    • Mann MB, Smith HO. Specificity of Hpa II and Hae III DNA methylases. Nucleic acids research. 1977; 4 (12):4211-21. PMID: 600794; PubMed Central PMCID: PMC343235.
    • (1977) Nucleic Acids Research. , vol.4 , Issue.12 , pp. 4211-4221
    • Mann, M.B.1    Smith, H.O.2
  • 42
    • 84878571199 scopus 로고    scopus 로고
    • Rice epigenomics and epigenetics: Challenges and opportunities
    • 23562565
    • Chen X, Zhou DX. Rice epigenomics and epigenetics: challenges and opportunities. Current opinion in plant biology. 2013; 16(2):164-9. doi: 10.1016/j.pbi.2013.03.004 PMID: 23562565.
    • (2013) Current Opinion in Plant Biology. , vol.16 , Issue.2 , pp. 164-169
    • Chen, X.1    Zhou, D.X.2
  • 43
    • 84891801241 scopus 로고    scopus 로고
    • The other face of restriction: Modification-dependent enzymes
    • 23990325 PubMed Central PMCID: PMC3874153
    • Loenen WA, Raleigh EA. The other face of restriction: modification-dependent enzymes. Nucleic acids research. 2014; 42(1):56-69. doi: 10.1093/nar/gkt747 PMID: 23990325; PubMed Central PMCID: PMC3874153.
    • (2014) Nucleic Acids Research. , vol.42 , Issue.1 , pp. 56-69
    • Loenen, W.A.1    Raleigh, E.A.2
  • 44
    • 77956500617 scopus 로고    scopus 로고
    • A unique family of Mrr-like modification-dependent restriction endonucleases
    • 20444879 PubMed Central PMCID: PMC2938202
    • Zheng Y, Cohen-Karni D, Xu D, Chin HG, Wilson G, Pradhan S, et al. A unique family of Mrr-like modification-dependent restriction endonucleases. Nucleic acids research. 2010; 38(16):5527-34. doi: 10. 1093/nar/gkq327 PMID: 20444879; PubMed Central PMCID: PMC2938202.
    • (2010) Nucleic Acids Research. , vol.38 , Issue.16 , pp. 5527-5534
    • Zheng, Y.1    Cohen-Karni, D.2    Xu, D.3    Chin, H.G.4    Wilson, G.5    Pradhan, S.6
  • 45
    • 84875010066 scopus 로고    scopus 로고
    • Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing
    • 23554971 PubMed Central PMCID: PMC3598902
    • De Meyer T, Mampaey E, Vlemmix M, Denil S, Trooskens G, Renard JP, et al. Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing. PloS one. 2013; 8(3): e59068. doi: 10.1371/journal.pone.0059068 PMID: 23554971; PubMed Central PMCID: PMC3598902.
    • (2013) PloS One. , vol.8 , Issue.3
    • De Meyer, T.1    Mampaey, E.2    Vlemmix, M.3    Denil, S.4    Trooskens, G.5    Renard, J.P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.