Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination

Molecular Plant

Volumn 9, Issue 1, 2016, Pages 34-45

  Shu, Kai ^a,c   Liu, Xiao Dong ^b,d   Xie, Qi ^a   He, Zu Hua ^b  

^a INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

^b INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY   (China)

^c SICHUAN AGRICULTURAL UNIVERSITY   (China)

^d XINJIANG AGRICULTURAL UNIVERSITY   (China)

Author keywords

ABA; auxin; crosstalk; GA; germination; seed dormancy

Indexed keywords

PHYTOHORMONE;

DORMANCY; GERMINATION; GROWTH, DEVELOPMENT AND AGING; PHYSIOLOGY; PLANT; PLANT PHYSIOLOGY; PLANT SEED; SIGNAL TRANSDUCTION;

GERMINATION; PLANT DORMANCY; PLANT GROWTH REGULATORS; PLANT PHYSIOLOGICAL PHENOMENA; PLANTS; SEEDS; SIGNAL TRANSDUCTION;

EID: 84952985047     PISSN: 16742052     EISSN: 17529867     Source Type: Journal    
DOI: 10.1016/j.molp.2015.08.010     Document Type: Review

References (110)

1. E. Arc, M. Galland, B. Godin, G. Cueff, and L. Rajjou Nitric oxide implication in the control of seed dormancy and germination Front Plant Sci. 4 2013 346
2. E. Arc, J. Sechet, F. Corbineau, L. Rajjou, and A. Marion-Poll ABA crosstalk with ethylene and nitric oxide in seed dormancy and germination Front Plant Sci. 4 2013 63
3. J.M. Barrero, A.A. Millar, J. Griffiths, T. Czechowski, W.R. Scheible, M. Udvardi, J.B. Reid, J.J. Ross, J.V. Jacobsen, and F. Gubler Gene expression profiling identifies two regulatory genes controlling dormancy and ABA sensitivity in Arabidopsis seeds Plant J. 61 2010 611 622
4. J.M. Barrero, A.B. Downie, Q. Xu, and F. Gubler A role for barley CRYPTOCHROME1 in light regulation of grain dormancy and germination Plant Cell 26 2014 1094 1104
5. C. Belin, C. Megies, E. Hauserova, and L. Lopez-Molina Abscisic acid represses growth of the Arabidopsis embryonic axis after germination by enhancing auxin signaling Plant Cell 21 2009 2253 2268
6. M.F. Belmonte, R.C. Kirkbride, S.L. Stone, J.M. Pelletier, A.Q. Bui, E.C. Yeung, M. Hashimoto, J. Fei, C.M. Harada, M.D. Munoz, and et al. Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed Proc. Natl. Acad. Sci. USA 110 2013 E435 E444
7. L. Bentsink, and M. Koornneef Seed dormancy and germination Arabidopsis Book 6 2008 e0119
8. I.M. Brocard-Gifford, T.J. Lynch, and R.R. Finkelstein Regulatory networks in seeds integrating developmental, abscisic acid, sugar, and light signaling Plant Physiol. 131 2003 78 92
9. N.V. Bykova, B. Hoehn, C. Rampitsch, J. Hu, J.A. Stebbing, and R. Knox Thiol redox-sensitive seed proteome in dormant and non-dormant hybrid genotypes of wheat Phytochemistry 72 2011 1162 1172
10. R. Cantoro, C.D. Crocco, R.L. Benech-Arnold, and M.V. Rodriguez In vitro binding of Sorghum bicolor transcription factors ABI4 and ABI5 to a conserved region of a GA 2-OXIDASE promoter: possible role of this interaction in the expression of seed dormancy J. Exp. Bot. 64 2013 5721 5735
11. M.L. Chen, Y.Q. Huang, J.Q. Liu, B.F. Yuan, and Y.Q. Feng Highly sensitive profiling assay of acidic plant hormones using a novel mass probe by capillary electrophoresis-time of flight-mass spectrometry J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 879 2011 938 944
12. W.H. Cheng, M.H. Chiang, S.G. Hwang, and P.C. Lin Antagonism between abscisic acid and ethylene in Arabidopsis acts in parallel with the reciprocal regulation of their metabolism and signaling pathways Plant Mol. Biol. 71 2009 61 80
13. V. Chinnusamy, Z. Gong, and J.K. Zhu Abscisic acid-mediated epigenetic processes in plant development and stress responses J. Integr. Plant Biol. 50 2008 1187 1195
14. J.N. Cho, J.Y. Ryu, Y.M. Jeong, J. Park, J.J. Song, R.M. Amasino, B. Noh, and Y.S. Noh Control of seed germination by light-induced histone arginine demethylation activity Dev. Cell 22 2012 736 748
15. C.E. Cook, L.P. Whichard, B. Turner, M.E. Wall, and G.H. Egley Germination of witchweed (Striga lutea Lour.): isolation and properties of a potent stimulant Science 154 1966 1189 1190
16. F. Corbineau, Q. Xia, C. Bailly, and H. El-Maarouf-Bouteau Ethylene, a key factor in the regulation of seed dormancy Front Plant Sci. 5 2014 539
17. S.R. Cutler, P.L. Rodriguez, R.R. Finkelstein, and S.R. Abrams Abscisic acid: emergence of a core signaling network Annu. Rev. Plant Biol. 61 2010 651 679
18. Z.J. Ding, J.Y. Yan, G.X. Li, Z.C. Wu, S.Q. Zhang, and S.J. Zheng WRKY41 controls Arabidopsis seed dormancy via direct regulation of ABI3 transcript levels not downstream of ABA Plant J. 79 2014 810 823
19. A. Fernandez-Arbaizar, J.J. Regalado, and O. Lorenzo Isolation and characterization of novel mutant loci suppressing the ABA hypersensitivity of the Arabidopsis coronatine insensitive 1-16 (coi1-16) mutant during germination and seedling growth Plant Cell Physiol. 53 2012 53 63
20. R.R. Finkelstein Mutations at 2 new Arabidopsis Aba response loci are similar to the Abi3 mutations Plant J. 5 1994 765 771
21. R. Finkelstein, W. Reeves, T. Ariizumi, and C. Steber Molecular aspects of seed dormancy Annu. Rev. Plant Biol. 59 2008 387 415
22. S. Footitt, I. Douterelo-Soler, H. Clay, and W.E. Finch-Savage Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways Proc. Natl. Acad. Sci. USA 108 2011 20236 20241
23. S. Footitt, K. Muller, A.R. Kermode, and W.E. Finch-Savage Seed dormancy cycling in Arabidopsis: chromatin remodelling and regulation of DOG1 in response to seasonal environmental signals Plant J. 81 2015 413 425
24. A. Frey, D. Effroy, V. Lefebvre, M. Seo, F. Perreau, A. Berger, J. Sechet, A. To, H.M. North, and A. Marion-Poll Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members Plant J. 70 2011 501 512
25. K. Graeber, K. Nakabayashi, E. Miatton, G. Leubner-Metzger, and W.J. Soppe Molecular mechanisms of seed dormancy Plant Cell Environ. 35 2012 1769 1786
26. K. Graeber, A. Linkies, T. Steinbrecher, K. Mummenhoff, D. Tarkowska, V. Tureckova, M. Ignatz, K. Sperber, A. Voegele, H. de Jong, and et al. DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination Proc. Natl. Acad. Sci. USA 111 2014 E3571 E3580
27. C. Guan, X. Wang, J. Feng, S. Hong, Y. Liang, B. Ren, and J. Zuo Cytokinin antagonizes abscisic acid-mediated inhibition of cotyledon greening by promoting the degradation of abscisic acid insensitive5 protein in Arabidopsis Plant Physiol. 164 2014 1515 1526
28. F. Gubler, A.A. Millar, and J.V. Jacobsen Dormancy release, ABA and pre-harvest sprouting Curr. Opin. Plant Biol. 8 2005 183 187
29. F. Gubler, T. Hughes, P. Waterhouse, and J. Jacobsen Regulation of dormancy in barley by blue light and after-ripening: effects on abscisic acid and gibberellin metabolism Plant Physiol. 147 2008 886 896
30. H.H. Hoang, J. Sechet, C. Bailly, J. Leymarie, and F. Corbineau Inhibition of germination of dormant barley (Hordeum vulgare L.) grains by blue light as related to oxygen and hormonal regulation Plant Cell Environ. 37 2014 1393 1403
31. M.J. Holdsworth, L. Bentsink, and W.J. Soppe Molecular networks regulating Arabidopsis seed maturation, after-ripening, dormancy and germination New Phytol. 179 2008 33 54
32. Y.F. Hong, T.H. Ho, C.F. Wu, S.L. Ho, R.H. Yeh, C.A. Lu, P.W. Chen, L.C. Yu, A. Chao, and S.M. Yu Convergent starvation signals and hormone crosstalk in regulating nutrient mobilization upon germination in cereals Plant Cell 24 2012 2857 2873
33. Y. Hu, and D. Yu BRASSINOSTEROID INSENSITIVE2 interacts with ABSCISIC ACID INSENSITIVE5 to mediate the antagonism of brassinosteroids to abscisic acid during seed germination in Arabidopsis Plant Cell 26 2014 4394 4408
34. K.E. Hubbard, N. Nishimura, K. Hitomi, E.D. Getzoff, and J.I. Schroeder Early abscisic acid signal transduction mechanisms: newly discovered components and newly emerging questions Genes Dev. 24 2010 1695 1708
35. S.E. Jacobsen, and N.E. Olszewski Mutations at the spindly locus of Arabidopsis alter gibberellin signal-transduction Plant Cell. 5 1993 887 896
36. J.V. Jacobsen, J.M. Barrero, T. Hughes, M. Julkowska, J.M. Taylor, Q. Xu, and F. Gubler Roles for blue light, jasmonate and nitric oxide in the regulation of dormancy and germination in wheat grain (Triticum aestivum L.) Planta 238 2013 121 138
37. L. Jiang, X. Liu, G. Xiong, H. Liu, F. Chen, L. Wang, X. Meng, G. Liu, H. Yu, Y. Yuan, and et al. DWARF 53 acts as a repressor of strigolactone signalling in rice Nature 504 2013 401 405
38. M. Kanai, M. Nishimura, and M. Hayashi A peroxisomal ABC transporter promotes seed germination by inducing pectin degradation under the control of ABI5 Plant J. 62 2010 936 947
39. S.L. Kendall, A. Hellwege, P. Marriot, C. Whalley, I.A. Graham, and S. Penfield Induction of dormancy in Arabidopsis summer annuals requires parallel regulation of DOG1 and hormone metabolism by low temperature and CBF transcription factors Plant Cell 23 2011 2568 2580
40. W. Kim, Y. Lee, J. Park, N. Lee, and G. Choi HONSU, a protein phosphatase 2C, regulates seed dormancy by inhibiting ABA signaling in Arabidopsis Plant Cell Physiol. 54 2013 555 572
41. 2+ level to counteract effect of abscisic acid in seed germination Plant Physiol. 167 2015 1630 1642
42. B. Kucera, M.A. Cohn, and G. Leubner-Metzger Plant hormone interactions during seed dormancy release and germination Seed Sci. Res. 15 2005 281 307
43. K.P. Lee, and L. Lopez-Molina A seed coat bedding assay to genetically explore in vitro how the endosperm controls seed germination in Arabidopsis thaliana J. Vis. Exp. 81 2013 e50732
44. S. Lee, H. Cheng, K.E. King, W. Wang, Y. He, A. Hussain, J. Lo, N.P. Harberd, and J. Peng Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition Genes Dev. 16 2002 646 658
45. K.P. Lee, U. Piskurewicz, V. Tureckova, M. Strnad, and L. Lopez-Molina A seed coat bedding assay shows that RGL2-dependent release of abscisic acid by the endosperm controls embryo growth in Arabidopsis dormant seeds Proc. Natl. Acad. Sci. USA 107 2010 19108 19113
46. S. Lee, S.G. Kim, and C.M. Park Salicylic acid promotes seed germination under high salinity by modulating antioxidant activity in Arabidopsis New Phytol. 188 2010 626 637
47. H.G. Lee, K. Lee, and P.J. Seo The Arabidopsis MYB96 transcription factor plays a role in seed dormancy Plant Mol. Biol. 87 2015 371 381
48. K. Lee, H.G. Lee, S. Yoon, H.U. Kim, and P.J. Seo The Arabidopsis MYB96 transcription factor is a positive regulator of ABI4 in the control of seed germination Plant Physiol. 168 2015 677 689
49. S.J. Lee, M.H. Lee, J.I. Kim, and S.Y. Kim Arabidopsis putative MAP kinase kinase kinases Raf10 and Raf11 are positive regulators of seed dormancy and ABA response Plant Cell Physiol. 56 2015 84 97
50. T. Lenser, and G. Theissen Molecular mechanisms involved in convergent crop domestication Trends Plant Sci. 18 2013 704 714
51. S. Lim, J. Park, N. Lee, J. Jeong, S. Toh, A. Watanabe, J. Kim, H. Kang, D.H. Kim, N. Kawakami, and et al. ABA-INSENSITIVE3, ABA-INSENSITIVE5, and DELLAs interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis Plant Cell 25 2014 4863 4878
52. A. Linkies, and G. Leubner-Metzger Beyond gibberellins and abscisic acid: how ethylene and jasmonates control seed germination Plant Cell Rep. 31 2012 253 270
53. A. Linkies, K. Muller, K. Morris, V. Tureckova, M. Wenk, C.S. Cadman, F. Corbineau, M. Strnad, J.R. Lynn, W.E. Finch-Savage, and et al. Ethylene interacts with abscisic acid to regulate endosperm rupture during germination: a comparative approach using Lepidium sativum and Arabidopsis thaliana Plant Cell 21 2009 3803 3822
54. Y. Liu, M. Koornneef, and W.J. Soppe The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy Plant Cell 19 2007 433 444
55. Y. Liu, R. Geyer, M. van Zanten, A. Carles, Y. Li, A. Horold, S. van Nocker, and W.J. Soppe Identification of the Arabidopsis REDUCED DORMANCY 2 gene uncovers a role for the polymerase associated factor 1 complex in seed dormancy PLoS One 6 2011 e22241
56. A. Liu, F. Gao, Y. Kanno, M.C. Jordan, Y. Kamiya, M. Seo, and B.T. Ayele Regulation of wheat seed dormancy by after-ripening is mediated by specific transcriptional switches that induce changes in seed hormone metabolism and signaling PLoS One 8 2013 e56570
57. X. Liu, H. Zhang, Y. Zhao, Z. Feng, Q. Li, H.Q. Yang, S. Luan, J. Li, and Z.H. He Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis Proc. Natl. Acad. Sci. USA 110 2013 15485 15490
58. Y. Ma Regulators of PP2C phosphatase activity function as abscisic acid sensors Science 324 2009 1264 1268
59. D.R. MacGregor, S.L. Kendall, H. Florance, F. Fedi, K. Moore, K. Paszkiewicz, N. Smirnoff, and S. Penfield Seed production temperature regulation of primary dormancy occurs through control of seed coat phenylpropanoid metabolism New Phytol. 205 2015 642 652
60. H. Magome, S. Yamaguchi, A. Hanada, Y. Kamiya, and K. Oda The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene, GA2ox7, under high-salinity stress in Arabidopsis Plant J. 56 2008 613 626
61. C. Martinez-Andujar, M.I. Ordiz, Z. Huang, M. Nonogaki, R.N. Beachy, and H. Nonogaki Induction of 9-cis-epoxycarotenoid dioxygenase in Arabidopsis thaliana seeds enhances seed dormancy Proc. Natl. Acad. Sci. USA 108 2011 17225 17229
62. T. Matakiadis, A. Alboresi, Y. Jikumaru, K. Tatematsu, O. Pichon, J.P. Renou, Y. Kamiya, E. Nambara, and H.N. Truong The Arabidopsis abscisic acid catabolic gene CYP707A2 plays a key role in nitrate control of seed dormancy Plant Physiol. 149 2009 949 960
63. M. Mehrnia, S. Balazadeh, M.I. Zanor, and B. Mueller-Roeber EBE, an AP2/ERF transcription factor highly expressed in proliferating cells, affects shoot architecture in Arabidopsis Plant Physiol. 162 2013 842 857
64. R.S. Meyer, and M.D. Purugganan Evolution of crop species: genetics of domestication and diversification Nat. Rev. Genet. 14 2013 840 852
65. A.A. Millar, J.V. Jacobsen, J.J. Ross, C.A. Helliwell, A.T. Poole, G. Scofield, J.B. Reid, and F. Gubler Seed dormancy and ABA metabolism in Arabidopsis and barley: the role of ABA 8′-hydroxylase Plant J. 45 2006 942 954
66. K. Nakabayashi, M. Bartsch, Y. Xiang, E. Miatton, S. Pellengahr, R. Yano, M. Seo, and W.J. Soppe The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds Plant Cell 24 2012 2826 2838
67. S. Nakamura, F. Abe, H. Kawahigashi, K. Nakazono, A. Tagiri, T. Matsumoto, S. Utsugi, T. Ogawa, H. Handa, H. Ishida, and et al. A wheat homolog of MOTHER OF FT AND TFL1 acts in the regulation of germination Plant Cell 23 2011 3215 3229
68. E. Nambara, M. Okamoto, K. Tatematsu, R. Yano, M. Seo, and Y. Kamiya Abscisic acid and the control of seed dormancy and germination Seed Sci. Res. 20 2010 55 67
69. M. Nonogaki, K. Sall, E. Nambara, and H. Nonogaki Amplification of ABA biosynthesis and signaling through a positive feedback mechanism in seeds Plant J. 78 2014 527 539
70. E. Oh, S. Yamaguchi, J. Hu, J. Yusuke, B. Jung, I. Paik, H.S. Lee, T.P. Sun, Y. Kamiya, and G. Choi PIL5, a phytochrome-interacting bHLH protein, regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds Plant cell 19 2007 1192 1208
71. D. Papaefthimiou, E. Likotrafiti, A. Kapazoglou, K. Bladenopoulos, and A. Tsaftaris Epigenetic chromatin modifiers in barley: III. Isolation and characterization of the barley GNAT-MYST family of histone acetyltransferases and responses to exogenous ABA Plant Physiol. Biochem. 48 2010 98 107
72. S.Y. Park, P. Fung, N. Nishimura, D.R. Jensen, H. Fujii, Y. Zhao, S. Lumba, J. Santiago, A. Rodrigues, T.F.F. Chow, and et al. Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins Science 324 2009 1068 1071
73. J. Park, Y.S. Kim, S.G. Kim, J.H. Jung, J.C. Woo, and C.M. Park Integration of auxin and salt signals by the NAC transcription factor NTM2 during seed germination in Arabidopsis Plant Physiol. 156 2011 537 549
74. U. Piskurewicz, Y. Jikumaru, N. Kinoshita, E. Nambara, Y. Kamiya, and L. Lopez-Molina The gibberellic acid signaling repressor RGL2 inhibits Arabidopsis seed germination by stimulating abscisic acid synthesis and ABI5 activity Plant Cell 20 2008 2729 2745
75. L. Rajjou, M. Duval, K. Gallardo, J. Catusse, J. Bally, C. Job, and D. Job Seed germination and vigor Annu. Rev. Plant Biol. 63 2012 507 533
76. S. Ramaih, M. Guedira, and G.M. Paulsen Relationship of indoleacetic acid and tryptophan to dormancy and preharvest sprouting of wheat Funct. Plant Biol. 30 2003 939 945
77. F. Resentini, A. Felipo-Benavent, L. Colombo, M.A. Blazquez, D. Alabadi, and S. Masiero TCP14 and TCP15 mediate the promotion of seed germination by gibberellins in Arabidopsis thaliana Mol. Plant 8 2015 482 485
78. R. Richter, C. Behringer, M. Zourelidou, and C. Schwechheimer Convergence of auxin and gibberellin signaling on the regulation of the GATA transcription factors GNC and GNL in Arabidopsis thaliana Proc. Natl. Acad. Sci. USA 110 2013 13192 13197
79. M. Riefler, O. Novak, M. Strnad, and T. Schmulling Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism Plant Cell 18 2006 40 54
80. A. Saez, A. Rodrigues, J. Santiago, S. Rubio, and P.L. Rodriguez HAB1-SWI3B interaction reveals a link between abscisic acid signaling and putative SWI/SNF chromatin-remodeling complexes in Arabidopsis Plant Cell 20 2008 2972 2988
81. M. Seo, A. Hanada, A. Kuwahara, A. Endo, M. Okamoto, Y. Yamauchi, H. North, A. Marion-Poll, T.P. Sun, T. Koshiba, and et al. Regulation of hormone metabolism in Arabidopsis seeds: phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism Plant J. 48 2006 354 366
82. S.S. Shaik, M. Carciofi, H.J. Martens, K.H. Hebelstrup, and A. Blennow Starch bioengineering affects cereal grain germination and seedling establishment J. Exp. Bot. 65 2014 2257 2270
83. K. Shu, H. Zhang, S. Wang, M. Chen, Y. Wu, S. Tang, C. Liu, Y. Feng, X. Cao, and Q. Xie ABI4 regulates primary seed dormancy by regulating the biogenesis of abscisic acid and gibberellins in Arabidopsis PLoS Genet. 9 2013 e1003577
84. S. Simsek, J.B. Ohm, H. Lu, M. Rugg, W. Berzonsky, M.S. Alamri, and M. Mergoum Effect of pre-harvest sprouting on physicochemical changes of proteins in wheat J. Sci. Food Agric. 94 2014 205 212
85. J.P. Stanga, S.M. Smith, W.R. Briggs, and D.C. Nelson SUPPRESSOR OF MORE AXILLARY GROWTH2 1 controls seed germination and seedling development in Arabidopsis Plant Physiol. 163 2013 318 330
86. C.M. Steber, and P. McCourt A role for brassinosteroids in germination in Arabidopsis Plant Physiol. 125 2001 763 769
87. V. Subbiah, and K.J. Reddy Interactions between ethylene, abscisic acid and cytokinin during germination and seedling establishment in Arabidopsis J. Biosci. 35 2010 451 458
88. S. Toh, Y. Kamiya, N. Kawakami, E. Nambara, P. McCourt, and Y. Tsuchiya Thermoinhibition uncovers a role for strigolactones in Arabidopsis seed germination Plant Cell Physiol. 53 2012 107 117
89. M. Umehara, A. Hanada, S. Yoshida, K. Akiyama, T. Arite, N. Takeda-Kamiya, H. Magome, Y. Kamiya, K. Shirasu, K. Yoneyama, and et al. Inhibition of shoot branching by new terpenoid plant hormones Nature 455 2008 195 200
90. F.E. Vaistij, Y. Gan, S. Penfield, A.D. Gilday, A. Dave, Z. He, E.M. Josse, G. Choi, K.J. Halliday, and I.A. Graham Differential control of seed primary dormancy in Arabidopsis ecotypes by the transcription factor SPATULA Proc. Natl. Acad. Sci. USA 110 2013 10866 10871
91. S. Vanneste, and J. Friml Auxin: a trigger for change in plant development Cell 136 2009 1005 1016
92. L. Wang, D. Hua, J. He, Y. Duan, Z. Chen, X. Hong, and Z. Gong Auxin Response Factor2 (ARF2) and its regulated homeodomain gene HB33 mediate abscisic acid response in Arabidopsis PLoS Genet. 7 2011 e1002172
93. Y. Wang, L. Li, T. Ye, S. Zhao, Z. Liu, Y.Q. Feng, and Y. Wu Cytokinin antagonizes ABA suppression to seed germination of Arabidopsis by downregulating ABI5 expression Plant J. 68 2011 249 261
94. Z. Wang, H. Cao, Y. Sun, X. Li, F. Chen, A. Carles, Y. Li, M. Ding, C. Zhang, X. Deng, and et al. Arabidopsis paired amphipathic helix proteins SNL1 and SNL2 redundantly regulate primary seed dormancy via abscisic acid-ethylene antagonism mediated by histone deacetylation Plant Cell 25 2013 149 166
95. R.L. Wilson, H. Kim, A. Bakshi, and B.M. Binder The ethylene receptors ETHYLENE RESPONSE1 and ETHYLENE RESPONSE2 have contrasting roles in seed germination of Arabidopsis during salt stress Plant Physiol. 165 2014 1353 1366
96. J.J. Wind, A. Peviani, B. Snel, J. Hanson, and S.C. Smeekens ABI4: versatile activator and repressor Trends Plant Sci. 18 2013 125 132
97. W. Xi, and H. Yu Mother of FT and TFL1 regulates seed germination and fertility relevant to the brassinosteroid signaling pathway Plant Signal Behav. 5 2010 1315 1317
98. W. Xi, C. Liu, X. Hou, and H. Yu MOTHER OF FT AND TFL1 regulates seed germination through a negative feedback loop modulating ABA signaling in Arabidopsis Plant Cell 22 2010 1733 1748
99. Y. Xiang, K. Nakabayashi, J. Ding, F. He, L. Bentsink, and W.J. Soppe Reduced Dormancy5 encodes a protein phosphatase 2C that is required for seed dormancy in Arabidopsis Plant Cell 26 2014 4362 4375
100. Z. Xie, Z.L. Zhang, S. Hanzlik, E. Cook, and Q.J. Shen Salicylic acid inhibits gibberellin-induced alpha-amylase expression and seed germination via a pathway involving an abscisic-acid-inducible WRKY gene Plant Mol. Biol. 64 2007 293 303
101. M.W. Yaish, A. El-Kereamy, T. Zhu, P.H. Beatty, A.G. Good, Y.M. Bi, and S.J. Rothstein The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice PLoS Genet. 6 2010 e1001098
102. K. Yamagishi, K. Tatematsu, R. Yano, J. Preston, S. Kitamura, H. Takahashi, P. McCourt, Y. Kamiya, and E. Nambara CHOTTO1, a double AP2 domain protein of Arabidopsis thaliana, regulates germination and seedling growth under excess supply of glucose and nitrate Plant Cell Physiol. 50 2009 330 340
103. Y. Yamauchi, N. Takeda-Kamiya, A. Hanada, M. Ogawa, A. Kuwahara, M. Seo, Y. Kamiya, and S. Yamaguchi Contribution of gibberellin deactivation by AtGA2ox2 to the suppression of germination of dark-imbibed Arabidopsis thaliana seeds Plant Cell Physiol. 48 2007 555 561
104. R. Yano, Y. Kanno, Y. Jikumaru, K. Nakabayashi, Y. Kamiya, and E. Nambara CHOTTO1, a putative double APETALA2 repeat transcription factor, is involved in abscisic acid-mediated repression of gibberellin biosynthesis during seed germination in Arabidopsis Plant Physiol. 151 2009 641 654
105. Y. Zhao Auxin biosynthesis and its role in plant development Annu. Rev. Plant Biol. 61 2010 49 64
106. M. Zhao, S. Yang, X. Liu, and K. Wu Arabidopsis histone demethylases LDL1 and LDL2 control primary seed dormancy by regulating delay of germination 1 and ABA signaling-related genes Front Plant Sci. 6 2015 159
107. J. Zheng, F. Chen, Z. Wang, H. Cao, X. Li, X. Deng, W.J. Soppe, Y. Li, and Y. Liu A novel role for histone methyltransferase KYP/SUVH4 in the control of Arabidopsis primary seed dormancy New Phytol. 193 2012 605 616
108. F. Zhou, Q. Lin, L. Zhu, Y. Ren, K. Zhou, N. Shabek, F. Wu, H. Mao, W. Dong, L. Gan, and et al. D14-SCFD3-dependent degradation of D53 regulates strigolactone signalling Nature 504 2013 406 410
109. S.F. Zhou, L. Sun, A.E. Valdes, P. Engstrom, Z.T. Song, S.J. Lu, and J.X. Liu Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis New Phytol. 208 2015 188 197
110. X. Zhou, H. Hao, Y. Zhang, Y. Bai, W. Zhu, Y. Qin, F. Yuan, F. Zhao, M. Wang, J. Hu, and et al. PKS5/CIPK11, a SnRK3-Type protein kinase, is important for ABA responses in Arabidopsis through phosphorylation of ABI5 Plant Physiol. 168 2015 659 676