메뉴 건너뛰기




Volumn 10, Issue 11, 2015, Pages

Ultrasensitive detection of RNA and DNA viruses simultaneously using duplex UNDP-PCR assay

Author keywords

[No Author keywords available]

Indexed keywords

BUFFER; GOLD NANOPARTICLE; DNA PROBE; NANOPARTICLE;

EID: 84952683862     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0141545     Document Type: Article
Times cited : (13)

References (33)
  • 1
    • 84921458976 scopus 로고    scopus 로고
    • Preliminary study on prevalence, risk factor and genetic homogeneity of porcine reproductive and respiratory syndrome virus in registered pig farms in Heilongjiang, China
    • 25581817
    • Wang J, Wen H, Wang S, Sun W, Shen N, Liu Z, et al. Preliminary Study on Prevalence, Risk Factor and Genetic Homogeneity of Porcine Reproductive and Respiratory Syndrome Virus in Registered Pig Farms in Heilongjiang, China. Transboundary and emerging diseases. 2015. doi:10.1111/tbed.12312 PMID: 25581817.
    • (2015) Transboundary and Emerging Diseases
    • Wang, J.1    Wen, H.2    Wang, S.3    Sun, W.4    Shen, N.5    Liu, Z.6
  • 3
    • 84903446871 scopus 로고    scopus 로고
    • Classical swine fever in China: A minireview
    • 24793098
    • Luo Y, Li S, Sun Y, Qiu HJ. Classical swine fever in China: a minireview. Veterinary microbiology. 2014;172(1-2):1-6. doi:10.1016/j.vetmic.2014.04.004 PMID: 24793098.
    • (2014) Veterinary Microbiology , vol.172 , Issue.1-2 , pp. 1-6
    • Luo, Y.1    Li, S.2    Sun, Y.3    Qiu, H.J.4
  • 4
    • 84930205132 scopus 로고    scopus 로고
    • Molecular epidemiology of outbreak-associated pseudorabies virus (PRV) strains in central China
    • 25860998
    • Wang Y, Qiao S, Li X, Xie W, Guo J, Li Q, et al. Molecular epidemiology of outbreak-associated pseudorabies virus (PRV) strains in central China. Virus genes. 2015;50(3):401-9. doi:10.1007/s11262-015-1190-0 PMID: 25860998.
    • (2015) Virus Genes , vol.50 , Issue.3 , pp. 401-409
    • Wang, Y.1    Qiao, S.2    Li, X.3    Xie, W.4    Guo, J.5    Li, Q.6
  • 5
    • 84930901372 scopus 로고    scopus 로고
    • Prevalence of emerging porcine parvoviruses and their co-infections with porcine circovirus type 2 in China
    • 25742931
    • Sun J, Huang L, Wei Y, Wang Y, Chen D, Du W, et al. Prevalence of emerging porcine parvoviruses and their co-infections with porcine circovirus type 2 in China. Archives of virology. 2015;160(5):1339-44. doi:10.1007/s00705-015-2373-7 PMID: 25742931.
    • (2015) Archives of Virology , vol.160 , Issue.5 , pp. 1339-1344
    • Sun, J.1    Huang, L.2    Wei, Y.3    Wang, Y.4    Chen, D.5    Du, W.6
  • 6
    • 77957019522 scopus 로고    scopus 로고
    • Molecular epidemiology of porcine epidemic diarrhea virus in China
    • 20544234
    • Chen J, Wang C, Shi H, Qiu H, Liu S, Chen X, et al. Molecular epidemiology of porcine epidemic diarrhea virus in China. Archives of virology. 2010;155(9):1471-6. doi:10.1007/s00705-010-0720-2 PMID: 20544234.
    • (2010) Archives of Virology , vol.155 , Issue.9 , pp. 1471-1476
    • Chen, J.1    Wang, C.2    Shi, H.3    Qiu, H.4    Liu, S.5    Chen, X.6
  • 7
    • 84880835373 scopus 로고    scopus 로고
    • Occurrence and investigation of enteric viral infections in pigs with diarrhea in China
    • 23494226
    • Zhang Q, Hu R, Tang X, Wu C, He Q, Zhao Z, et al. Occurrence and investigation of enteric viral infections in pigs with diarrhea in China. Archives of virology. 2013;158(8):1631-6. doi:10.1007/s00705-013-1659-x PMID: 23494226.
    • (2013) Archives of Virology , vol.158 , Issue.8 , pp. 1631-1636
    • Zhang, Q.1    Hu, R.2    Tang, X.3    Wu, C.4    He, Q.5    Zhao, Z.6
  • 8
    • 84878183574 scopus 로고    scopus 로고
    • The survey of porcine teschoviruses, porcine circovirus and porcine transmissible gastroenteritis virus infecting piglets in clinical specimens in China
    • 23224864
    • Wang L, Ge C, Wang D, Li Y, Hu J. The survey of porcine teschoviruses, porcine circovirus and porcine transmissible gastroenteritis virus infecting piglets in clinical specimens in China. Tropical animal health and production. 2013;45(5):1087-91. doi:10.1007/s11250-012-0329-4 PMID: 23224864.
    • (2013) Tropical Animal Health and Production , vol.45 , Issue.5 , pp. 1087-1091
    • Wang, L.1    Ge, C.2    Wang, D.3    Li, Y.4    Hu, J.5
  • 9
    • 84883809709 scopus 로고    scopus 로고
    • A multiplex RT-PCR assay for rapid and differential diagnosis of four porcine diarrhea associated viruses in field samples from pig farms in East China from 2010 to 2012
    • 23988656
    • Zhao J, Shi BJ, Huang XG, Peng MY, Zhang XM, He DN, et al. A multiplex RT-PCR assay for rapid and differential diagnosis of four porcine diarrhea associated viruses in field samples from pig farms in East China from 2010 to 2012. J Virol Methods. 2013;194(1-2):107-12. doi:10.1016/j.jviromet.2013.08. 008 PMID: 23988656.
    • (2013) J Virol Methods , vol.194 , Issue.1-2 , pp. 107-112
    • Zhao, J.1    Shi, B.J.2    Huang, X.G.3    Peng, M.Y.4    Zhang, X.M.5    He, D.N.6
  • 10
    • 0020408368 scopus 로고
    • Enzyme-linked immunosorbent assay for the detection of the coronavirus-like agent and its antibodies in pigs with porcine epidemic diarrhea
    • 7179716
    • Callebaut P, Debouck P, Pensaert M. Enzyme-linked immunosorbent assay for the detection of the coronavirus-like agent and its antibodies in pigs with porcine epidemic diarrhea. Veterinary microbiology. 1982;7(4):295-306. PMID: 7179716.
    • (1982) Veterinary Microbiology , vol.7 , Issue.4 , pp. 295-306
    • Callebaut, P.1    Debouck, P.2    Pensaert, M.3
  • 12
    • 0034720423 scopus 로고    scopus 로고
    • Detection and differentiation of porcine epidemic diarrhoea virus and transmissible gastroenteritis virus in clinical samples by multiplex RT-PCR
    • 10872784
    • Kim O, Choi C, Kim B, Chae C. Detection and differentiation of porcine epidemic diarrhoea virus and transmissible gastroenteritis virus in clinical samples by multiplex RT-PCR. The Veterinary record. 2000;146(22):637-40. PMID: 10872784.
    • (2000) The Veterinary Record , vol.146 , Issue.22 , pp. 637-640
    • Kim, O.1    Choi, C.2    Kim, B.3    Chae, C.4
  • 13
    • 0036259921 scopus 로고    scopus 로고
    • Comparison of reverse transcription polymerase chain reaction, immunohistochemistry, and in situ hybridization for the detection of porcine epidemic diarrhea virus in pigs
    • 11989732 PubMed Central PMCID: PMC226992
    • Kim O, Chae C. Comparison of reverse transcription polymerase chain reaction, immunohistochemistry, and in situ hybridization for the detection of porcine epidemic diarrhea virus in pigs. Canadian journal of veterinary research = Revue canadienne de recherche veterinaire. 2002;66(2):112-6. PMID: 11989732; PubMed Central PMCID: PMC226992.
    • (2002) Canadian Journal of Veterinary Research = Revue Canadienne de Recherche Veterinaire , vol.66 , Issue.2 , pp. 112-116
    • Kim, O.1    Chae, C.2
  • 14
    • 84860579788 scopus 로고    scopus 로고
    • Development of multiplex PCR for simultaneous detection of six swine DNA and RNA viruses
    • 22575688
    • Xu XG, Chen GD, Huang Y, Ding L, Li ZC, Chang CD, et al. Development of multiplex PCR for simultaneous detection of six swine DNA and RNA viruses. J Virol Methods. 2012;183(1):69-74. doi:10. 1016/j.jviromet.2012.03.034 PMID: 22575688.
    • (2012) J Virol Methods , vol.183 , Issue.1 , pp. 69-74
    • Xu, X.G.1    Chen, G.D.2    Huang, Y.3    Ding, L.4    Li, Z.C.5    Chang, C.D.6
  • 15
    • 79954443340 scopus 로고    scopus 로고
    • Reverse transcription loop-mediated isothermal amplification for rapid detection of transmissible gastroenteritis virus
    • 21127872
    • Li P, Ren X. Reverse transcription loop-mediated isothermal amplification for rapid detection of transmissible gastroenteritis virus. Current microbiology. 2011;62(3):1074-80. doi:10.1007/s00284-010-9825-9 PMID: 21127872.
    • (2011) Current Microbiology , vol.62 , Issue.3 , pp. 1074-1080
    • Li, P.1    Ren, X.2
  • 16
    • 70349730232 scopus 로고    scopus 로고
    • A real-time TaqMan RT-PCR assay with an internal amplification control for rapid detection of transmissible gastroenteritis virus in swine fecal samples
    • 19729039
    • Vemulapalli R, Gulani J, Santrich C. A real-time TaqMan RT-PCR assay with an internal amplification control for rapid detection of transmissible gastroenteritis virus in swine fecal samples. J Virol Methods. 2009;162(1-2):231-5. doi:10.1016/j.jviromet.2009.08.016 PMID: 19729039.
    • (2009) J Virol Methods , vol.162 , Issue.1-2 , pp. 231-235
    • Vemulapalli, R.1    Gulani, J.2    Santrich, C.3
  • 17
    • 84923595513 scopus 로고    scopus 로고
    • Rapid and sensitive detection of porcine epidemic diarrhea virus by reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip
    • 25444939
    • Gou H, Deng J, Wang J, Pei J, Liu W, Zhao M, et al. Rapid and sensitive detection of porcine epidemic diarrhea virus by reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip. Molecular and cellular probes. 2015;29(1):48-53. doi:10.1016/j.mcp. 2014.11. 004 PMID: 25444939.
    • (2015) Molecular and Cellular Probes , vol.29 , Issue.1 , pp. 48-53
    • Gou, H.1    Deng, J.2    Wang, J.3    Pei, J.4    Liu, W.5    Zhao, M.6
  • 18
    • 5644295573 scopus 로고    scopus 로고
    • Development of a novel real-time RT-PCR assay with LUX primer for the detection of swine transmissible gastroenteritis virus
    • 15488621
    • Chen R, Huang W, Lin Z, Zhou Z, Yu H, Zhu D. Development of a novel real-time RT-PCR assay with LUX primer for the detection of swine transmissible gastroenteritis virus. J Virol Methods. 2004;122(1):57-61. doi:10.1016/j.jviromet.2004.08.003 PMID: 15488621.
    • (2004) J Virol Methods , vol.122 , Issue.1 , pp. 57-61
    • Chen, R.1    Huang, W.2    Lin, Z.3    Zhou, Z.4    Yu, H.5    Zhu, D.6
  • 19
    • 84901331197 scopus 로고    scopus 로고
    • Preclinical detection of porcine circovirus type 2 infection using an ultrasensitive nanoparticle DNA probe-based PCR assay
    • 24842840 PubMed Central PMCID: PMC4026479
    • Huang Y, Zhang X, Du Q, Wang F, Zhao X, Zhang W, et al. Preclinical detection of porcine circovirus type 2 infection using an ultrasensitive nanoparticle DNA probe-based PCR assay. PloS one. 2014;9(5):e97869. doi:10.1371/journal.pone.0097869 PMID: 24842840; PubMed Central PMCID: PMC4026479.
    • (2014) PloS One , vol.9 , Issue.5 , pp. e97869
    • Huang, Y.1    Zhang, X.2    Du, Q.3    Wang, F.4    Zhao, X.5    Zhang, W.6
  • 22
    • 84862813130 scopus 로고    scopus 로고
    • Isolation and identification of porcine transmissible gastroenteritis virus Shaanxi strain and sequence analysis of its N gene
    • Ding G DCL., Xu X. G., Tong D. W. Isolation and identification of porcine transmissible gastroenteritis virus Shaanxi strain and sequence analysis of its N gene. Chin J Vet Med. 2011; (47:): 9-12.
    • (2011) Chin J Vet Med. , Issue.47 , pp. 9-12
    • Ding, G.D.C.L.1    Xu, X.G.2    Tong, D.W.3
  • 23
    • 84878471883 scopus 로고    scopus 로고
    • Evidence for different patterns of natural intergenotype recombination between two PCV2 parental strains in the field
    • 23545543
    • Huang Y, Shao M, Xu X, Zhang X, Du Q, Zhao X, et al. Evidence for different patterns of natural intergenotype recombination between two PCV2 parental strains in the field. Virus research. 2013;175(1):78-86. doi:10.1016/j.virusres.2013.03.014 PMID: 23545543.
    • (2013) Virus Research , vol.175 , Issue.1 , pp. 78-86
    • Huang, Y.1    Shao, M.2    Xu, X.3    Zhang, X.4    Du, Q.5    Zhao, X.6
  • 24
    • 84901316791 scopus 로고    scopus 로고
    • 21:6-12. Sequence analysis of porcine parvovirus YL strain and prokaryotic expression of VP2
    • 2012
    • Shi L HY, Xu XG, Tong DW (2012). 21:6-12. Sequence analysis of porcine parvovirus YL strain and prokaryotic expression of VP2. Acta Agriculturae Boreali-occidentalis Sinica. 2012; (21:).
    • (2012) Acta Agriculturae Boreali-occidentalis Sinica , Issue.21
    • Shi, L.H.Y.1    Xu, X.G.2    Tong, D.W.3
  • 25
    • 84877102726 scopus 로고    scopus 로고
    • Porcine epidemic diarrhea virus N protein prolongs S-phase cell cycle, induces endoplasmic reticulum stress, and up-regulates interleukin-8 expression
    • 23562137
    • Xu X, Zhang H, Zhang Q, Huang Y, Dong J, Liang Y, et al. Porcine epidemic diarrhea virus N protein prolongs S-phase cell cycle, induces endoplasmic reticulum stress, and up-regulates interleukin-8 expression. Veterinary microbiology. 2013;164(3-4):212-21. doi:10.1016/j.vetmic.2013.01.034 PMID: 23562137.
    • (2013) Veterinary Microbiology , vol.164 , Issue.3-4 , pp. 212-221
    • Xu, X.1    Zhang, H.2    Zhang, Q.3    Huang, Y.4    Dong, J.5    Liang, Y.6
  • 27
    • 41049096939 scopus 로고    scopus 로고
    • In vitro inhibition of classical swine fever virus replication by siRNAs targeting Npro and NS5B genes
    • 18262291
    • Xu X, Guo H, Xiao C, Zha Y, Shi Z, Xia X, et al. In vitro inhibition of classical swine fever virus replication by siRNAs targeting Npro and NS5B genes. Antiviral research. 2008;78(3):188-93. doi:10.1016/j. antiviral.2007.12.012 PMID: 18262291.
    • (2008) Antiviral Research , vol.78 , Issue.3 , pp. 188-193
    • Xu, X.1    Guo, H.2    Xiao, C.3    Zha, Y.4    Shi, Z.5    Xia, X.6
  • 28
    • 0028281399 scopus 로고
    • A method for the high efficiency of water-soluble carbodiimide-mediated amidation
    • 8053572
    • Sehgal D, Vijay IK. A method for the high efficiency of water-soluble carbodiimide-mediated amidation. Analytical biochemistry. 1994;218(1):87-91. doi:10.1006/abio.1994.1144 PMID: 8053572.
    • (1994) Analytical Biochemistry , vol.218 , Issue.1 , pp. 87-91
    • Sehgal, D.1    Vijay, I.K.2
  • 29
    • 84931561305 scopus 로고    scopus 로고
    • The structure and functions of coronavirus genomic 3' and 5' ends
    • 25736566 PubMed Central PMCID: PMC4476908
    • Yang D, Leibowitz JL. The structure and functions of coronavirus genomic 3' and 5' ends. Virus research. 2015;206:120-33. doi:10.1016/j.virusres.2015.02.025 PMID: 25736566; PubMed Central PMCID: PMC4476908.
    • (2015) Virus Research , vol.206 , pp. 120-133
    • Yang, D.1    Leibowitz, J.L.2
  • 30
    • 79955393818 scopus 로고    scopus 로고
    • Structure and functional relevance of a transcription-regulating sequence involved in coronavirus discontinuous RNA synthesis
    • 21389138 PubMed Central PMCID: PMC3126183
    • Dufour D, Mateos-Gomez PA, Enjuanes L, Gallego J, Sola I. Structure and functional relevance of a transcription-regulating sequence involved in coronavirus discontinuous RNA synthesis. Journal of virology. 2011;85(10):4963-73. doi:10.1128/JVI.02317-10 PMID: 21389138; PubMed Central PMCID: PMC3126183.
    • (2011) Journal of Virology , vol.85 , Issue.10 , pp. 4963-4973
    • Dufour, D.1    Mateos-Gomez, P.A.2    Enjuanes, L.3    Gallego, J.4    Sola, I.5
  • 31
    • 84906513047 scopus 로고    scopus 로고
    • Establishment and application of a multiplex PCR for rapid and simultaneous detection of six viruses in swine
    • 25116201
    • Zeng Z, Liu Z, Wang W, Tang D, Liang H, Liu Z. Establishment and application of a multiplex PCR for rapid and simultaneous detection of six viruses in swine. J Virol Methods. 2014;208:102-6. doi:10. 1016/j.jviromet.2014.08.001 PMID: 25116201.
    • (2014) J Virol Methods , vol.208 , pp. 102-106
    • Zeng, Z.1    Liu, Z.2    Wang, W.3    Tang, D.4    Liang, H.5    Liu, Z.6
  • 33
    • 0141868926 scopus 로고    scopus 로고
    • Nanoparticle-based bio-bar codes for the ultrasensitive detection of proteins
    • 14512622
    • Nam JM, Thaxton CS, Mirkin CA. Nanoparticle-based bio-bar codes for the ultrasensitive detection of proteins. Science. 2003;301(5641):1884-6. doi:10.1126/science.1088755 PMID: 14512622.
    • (2003) Science , vol.301 , Issue.5641 , pp. 1884-1886
    • Nam, J.M.1    Thaxton, C.S.2    Mirkin, C.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.