-
1
-
-
85030313899
-
OHSUMED: an interactive retrieval evaluation and new large test collection for research
-
Springer-Verlag New York Inc., New York, NY, USA, W. Bruce Croft, C.J. van Rijsbergen (Eds.)
-
Hersh William, Buckley Chris, Leone T.J., Hickam David OHSUMED: an interactive retrieval evaluation and new large test collection for research. Proceedings of the 17th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR '94) 1994, 192-201. Springer-Verlag New York Inc., New York, NY, USA. W. Bruce Croft, C.J. van Rijsbergen (Eds.).
-
(1994)
Proceedings of the 17th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR '94)
, pp. 192-201
-
-
Hersh, W.1
Buckley, C.2
Leone, T.J.3
Hickam, D.4
-
2
-
-
0742306576
-
Background and overview for KDD Cup 2002 task 1: information extraction from biomedical articles
-
(December 2002)
-
Yeh Alexander, Hirschman Lynette, Morgan Alexander Background and overview for KDD Cup 2002 task 1: information extraction from biomedical articles. SIGKDD Explor. Newsl. 2002, 4(2):87-89. (December 2002), http://doi.acm.org/10.1145/772862.772873. 10.1145/772862.772873.
-
(2002)
SIGKDD Explor. Newsl.
, vol.4
, Issue.2
, pp. 87-89
-
-
Yeh, A.1
Hirschman, L.2
Morgan, A.3
-
3
-
-
58149242540
-
TREC genomics special issue overview
-
Hersh William, Voorhees Ellen TREC genomics special issue overview. Inf. Retrieval 2008, 12:1-15.
-
(2008)
Inf. Retrieval
, vol.12
, pp. 1-15
-
-
Hersh, W.1
Voorhees, E.2
-
4
-
-
80053240828
-
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions
-
Chapman W.W., Nadkarni P.M., Hirschman L., D'Avolio L.W., Savova G.K., Uzuner Ö. Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. J. Am. Med. Inform. Assoc. 2011, 18(5):540-543.
-
(2011)
J. Am. Med. Inform. Assoc.
, vol.18
, Issue.5
, pp. 540-543
-
-
Chapman, W.W.1
Nadkarni, P.M.2
Hirschman, L.3
D'Avolio, L.W.4
Savova, G.K.5
Uzuner, Ö.6
-
6
-
-
84886418080
-
-
Pamela Forner, Henning Müller, Roberto Paredes, Paolo Rosso, Benno Stein (Eds.), Chapter in Information Access Evaluation. Multilinguality, Multimodality, and Visualization Volume 8138 of the series Lecture Notes in Computer Science
-
Hanna Suominen, Sanna Salanterä, Sumithra Velupillai, Wendy W. Chapman, Guergana Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J.F. Jones, Johannes Leveling, Liadh Kelly, Lorraine Goeuriot, David Martinez, Guido Zuccon, "Overview of the ShARe/CLEF eHealth Evaluation Lab 2013", in: Pamela Forner, Henning Müller, Roberto Paredes, Paolo Rosso, Benno Stein (Eds.), Chapter in Information Access Evaluation. Multilinguality, Multimodality, and Visualization, Volume 8138 of the series Lecture Notes in Computer Science, 2013, pp. 212-231.
-
(2013)
"Overview of the ShARe/CLEF eHealth Evaluation Lab 2013"
, pp. 212-231
-
-
Suominen, H.1
Salanterä, S.2
Velupillai, S.3
Chapman, W.W.4
Savova, G.5
Elhadad, N.6
Pradhan, S.7
South, B.R.8
Mowery, D.L.9
Jones, G.J.F.10
Leveling, J.11
Kelly, L.12
Goeuriot, L.13
Martinez, D.14
Zuccon, G.15
-
7
-
-
84906730141
-
Overview of the ShARe/CLEF eHealth Evaluation Lab 2014
-
Liadh Kelly, Lorraine Goeuriot, Hanna Suominen, Tobias Schreck, Gondy Leroy, Danielle L. Mowery, Sumithra Velupillai, Wendy W. Chapman, David Martinez, Guido Zuccon, João Palotti, Overview of the ShARe/CLEF eHealth Evaluation Lab 2014", in: Evangelos Kanoulas, Mihai Lupu, Paul Clough, Mark Sanderson, Mark Hall, Allan Hanbury, Elaine Toms (Eds.), Chapter in Information Access Evaluation. Multilinguality, Multimodality, and Interaction, Volume 8685 of the series Lecture Notes in Computer Science, 2014. pp. 172-191.
-
(2014)
", in: Evangelos Kanoulas, Mihai Lupu, Paul Clough, Mark Sanderson, Mark Hall, Allan Hanbury, Elaine Toms (Eds.), Chapter in Information Access Evaluation. Multilinguality, Multimodality, and Interaction, Volume 8685 of the series Lecture Notes in Computer Science
, pp. 172-191
-
-
Kelly, L.1
Goeuriot, L.2
Suominen, H.3
Schreck, T.4
Leroy, G.5
Mowery, D.L.6
Velupillai, S.7
Chapman, W.W.8
Martinez, D.9
Zuccon, G.10
Palotti, J.11
-
8
-
-
84963772329
-
Temporal annotations in the clinical domain
-
Styler William, Bethard Steven, Finan Sean, Palmer Martha, Pradhan Sameer, de Groen Piet, Erickson Brad, Miller Timothy, Chen Lin., Savova Guergana K., Pustejovsky James Temporal annotations in the clinical domain. Trans. Assoc. Comput. Linguistics 2014.
-
(2014)
Trans. Assoc. Comput. Linguistics
-
-
Styler, W.1
Bethard, S.2
Finan, S.3
Palmer, M.4
Pradhan, S.5
de Groen, P.6
Erickson, B.7
Miller, T.8
Chen, L.9
Savova, G.K.10
Pustejovsky, J.11
-
9
-
-
84905195863
-
Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research
-
(Epub 2014 Feb 17)
-
Deleger L., Lingren T., Ni Y., Kaiser M., Stoutenborough L., Marsolo K., Kouril M., Molnar K., Solti I. Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research. J. Biomed. Inform. 2014, 50:173-183. (Epub 2014 Feb 17). 10.1016/j.jbi.2014.01.014.
-
(2014)
J. Biomed. Inform.
, vol.50
, pp. 173-183
-
-
Deleger, L.1
Lingren, T.2
Ni, Y.3
Kaiser, M.4
Stoutenborough, L.5
Marsolo, K.6
Kouril, M.7
Molnar, K.8
Solti, I.9
-
11
-
-
34548508913
-
Evaluating the state-of-the-art in automatic de-identification
-
Uzuner Ö., Luo Y., Szolovits P. Evaluating the state-of-the-art in automatic de-identification. J. Med. Inform. Assoc. 2007, 14(5):550-563. 10.1197/jamia.M2444.
-
(2007)
J. Med. Inform. Assoc.
, vol.14
, Issue.5
, pp. 550-563
-
-
Uzuner, Ö.1
Luo, Y.2
Szolovits, P.3
-
12
-
-
34548516061
-
Identifying patient smoking status from medical discharge records
-
Uzuner Özlem, Goldstein Ira, Luo Yuan, Kohane Isaac Identifying patient smoking status from medical discharge records. J. Am. Med. Inform. Assoc. 2008, 15:14-24.
-
(2008)
J. Am. Med. Inform. Assoc.
, vol.15
, pp. 14-24
-
-
Uzuner, Özlem1
Goldstein, I.2
Luo, Y.3
Kohane, I.4
-
13
-
-
67649352145
-
Focus on i2b2 obesity NLP challenge: viewpoint paper: recognizing obesity and comorbidities in sparse data
-
Uzuner Ö. Focus on i2b2 obesity NLP challenge: viewpoint paper: recognizing obesity and comorbidities in sparse data. J. Med. Inform. Assoc. 2009, 16(4):561-570. 10.1197/jamia.M3115.
-
(2009)
J. Med. Inform. Assoc.
, vol.16
, Issue.4
, pp. 561-570
-
-
Uzuner, Ö.1
-
15
-
-
80053292637
-
2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text
-
Uzuner Ö., South B.R., Shen S., DuVall S.L. 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text. J. Am. Med. Inform. Assoc. 2011, 18:552-556.
-
(2011)
J. Am. Med. Inform. Assoc.
, vol.18
, pp. 552-556
-
-
Uzuner, Ö.1
South, B.R.2
Shen, S.3
DuVall, S.L.4
-
16
-
-
84872234230
-
Evaluating the state of the art in coreference resolution for electronic medical records
-
Uzuner Ö., Bodnari A., Shen S., Forbush T., Pestian J., South B.R. Evaluating the state of the art in coreference resolution for electronic medical records. J. Am. Med. Inform. Assoc. 2012, 19(5):786-791.
-
(2012)
J. Am. Med. Inform. Assoc.
, vol.19
, Issue.5
, pp. 786-791
-
-
Uzuner, Ö.1
Bodnari, A.2
Shen, S.3
Forbush, T.4
Pestian, J.5
South, B.R.6
-
17
-
-
84882744737
-
Evaluating temporal relations in clinical text: 2012 i2b2 challenge
-
(September-October)
-
Sun W., Rumshisky A., Uzuner Ö. Evaluating temporal relations in clinical text: 2012 i2b2 challenge. J. Am. Med. Inform. Assoc. 2013, 20(5):806-813. (September-October). 10.1136/amiajnl-2013-001628.
-
(2013)
J. Am. Med. Inform. Assoc.
, vol.20
, Issue.5
, pp. 806-813
-
-
Sun, W.1
Rumshisky, A.2
Uzuner, Ö.3
-
18
-
-
84957033447
-
Challenges in synthesizing replacements for PHI in narrative EMRs
-
(Eds.), Chapter in Medical Data Privacy Handbook, Springer, Anticipated Publication
-
A. Stubbs, Ö. Uzuner, C. Kotfila, I. Goldstein, P. Szolovitz, Challenges in synthesizing replacements for PHI in narrative EMRs, in: Aris Gkoulalas-Divanis, Grigorios Loukides (Eds.), Chapter in Medical Data Privacy Handbook, Springer, Anticipated Publication 2015.
-
(2015)
Aris Gkoulalas-Divanis, Grigorios Loukides
-
-
Stubbs, A.1
Uzuner, Ö.2
Kotfila, C.3
Goldstein, I.4
Szolovitz, P.5
-
19
-
-
78149490620
-
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications
-
Savova G.K., Masanz J.J., Ogren P.V., Zheng J., Sohn S., Kipper-Schuler K.C., Chute C.G. Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. J. Am. Med. Inform. Assoc. 2010, 17:507-513.
-
(2010)
J. Am. Med. Inform. Assoc.
, vol.17
, pp. 507-513
-
-
Savova, G.K.1
Masanz, J.J.2
Ogren, P.V.3
Zheng, J.4
Sohn, S.5
Kipper-Schuler, K.C.6
Chute, C.G.7
-
20
-
-
84940707615
-
Annotating risk factors for heart disease in clinical narratives for diabetic patients
-
Amber Stubbs, Özlem Uzuner, Annotating risk factors for heart disease in clinical narratives for diabetic patients, J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data, J. Biomed. Inform. 58S (2015) S78-S91, . doi:10.1016/j.jbi.2015.05.009.
-
(2015)
J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data, J. Biomed. Inform.
, vol.58S
, pp. S78-S91
-
-
Stubbs, A.1
Uzuner, Ö.2
-
21
-
-
84922381210
-
Heart Disease and Stroke Statistics - 2015 Update: A Report From the American Heart Association
-
Circulation 131 (2015) e29-e322 (Published online before print December 17, 2014 ).
-
Dariush Mozaffarian, Emelia J. Benjamin, Alan S. Go, Donna K. Arnett, Michael J. Blaha, Mary Cushman, Sarah de Ferranti, Jean-Pierre Després, Heather J. Fullerton, Virginia J. Howard, Mark D. Huffman, Suzanne E. Judd, Brett M. Kissela, Daniel T. Lackland, Judith H. Lichtman, Lynda D. Lisabeth, Simin Liu, Rachel H. Mackey, David B. Matchar, Darren K. McGuire, Emile R. Mohler, Claudia S. Moy, Paul Muntner, Michael E. Mussolino, Khurram Nasir, Robert W. Neumar, Graham Nichol, Latha Palaniappan, Dilip K. Pandey, Mathew J. Reeves, Carlos J. Rodriguez, Paul D. Sorlie, Joel Stein, Amytis Towfighi, Tanya N. Turan, Salim S. Virani, Joshua Z. Willey, Daniel Woo, Robert W. Yeh, Melanie B. Turner, Heart Disease and Stroke Statistics - 2015 Update: A Report From the American Heart Association, Circulation 131 (2015) e29-e322 (Published online before print December 17, 2014, ). doi:10.1161/CIR.0000000000000152.
-
-
-
Mozaffarian, D.1
Benjamin, E.J.2
Go, A.S.3
Arnett, D.K.4
Blaha, M.J.5
Cushman, M.6
de Ferranti, S.7
Després, J.P.8
Fullerton, H.J.9
Howard, V.J.10
Huffman, M.D.11
Judd, S.E.12
Kissela, B.M.13
Lackland, D.T.14
Lichtman, J.H.15
Lisabeth, L.D.16
Liu, S.17
Mackey, R.H.18
Matchar, D.B.19
McGuire, D.K.20
Mohle, E.R.21
Moy, C.S.22
Muntner, P.23
Mussolino, M.E.24
Nasir, K.25
Neumar, R.W.26
Nichol, G.27
Palaniappan, L.28
Pandey, D.K.29
Reeves, M.J.30
Rodriguez, C.J.31
Sorlie, P.D.32
Stein, J.33
Towfighi, A.34
Turan, T.N.35
Virani, S.S.36
Willey, J.Z.37
Woo, D.38
Yeh, R.W.39
Turner, M.B.40
more..
-
22
-
-
84951026409
-
Annotating longitudinal clinical narratives for de-identification: the 2014 i2b2/UTHealth corpus
-
August 2015
-
Amber Stubbs, Özlem Uzuner, Annotating longitudinal clinical narratives for de-identification: the 2014 i2b2/UTHealth corpus, J. Biomed. Inform., August 2015, pii: S1532-0464(15)00182-3, 58S (2015) S20-S29. doi:10.1016/j.jbi.2015.07.020.
-
(2015)
J. Biomed. Inform.
, vol.58S
, pp. S20-S29
-
-
Stubbs, A.1
Uzuner, Ö.2
-
23
-
-
84922770448
-
A matching framework for modeling symptom and medication relationships from clinical notes
-
(November).
-
Y. Ling, Y. An, X. Hu, A matching framework for modeling symptom and medication relationships from clinical notes, in: Bioinformatics and Biomedicine (BIBM), 2014 IEEE International Conference on IEEE, 2014, pp. 515-520 (November).
-
(2014)
Bioinformatics and Biomedicine (BIBM), 2014 IEEE International Conference on IEEE
, pp. 515-520
-
-
Ling, Y.1
An, Y.2
Hu, X.3
-
24
-
-
84886258393
-
Syntactic parsing of clinical text: guideline and corpus development with handling ill-formed sentences
-
(November-December, Epub 2013 Aug 1)
-
Fan J.W., Yang E.W., Jiang M., Prasad R., Loomis R.M., Zisook D.S., Denny J.C., Xu H., Huang Y. Syntactic parsing of clinical text: guideline and corpus development with handling ill-formed sentences. J. Am. Med. Inform. Assoc. 2013, 20(6):1168-1177. (November-December, Epub 2013 Aug 1). 10.1136/amiajnl-2013-001810.
-
(2013)
J. Am. Med. Inform. Assoc.
, vol.20
, Issue.6
, pp. 1168-1177
-
-
Fan, J.W.1
Yang, E.W.2
Jiang, M.3
Prasad, R.4
Loomis, R.M.5
Zisook, D.S.6
Denny, J.C.7
Xu, H.8
Huang, Y.9
-
25
-
-
84873102400
-
Assertion modeling and its role in clinical phenotype identification
-
(Epub 2012 Sep 21)
-
Bejan C.A., Vanderwende L., Xia F., Yetisgen-Yildiz M. Assertion modeling and its role in clinical phenotype identification. J. Biomed. Inform. 2013, 46(1):68-74. (Epub 2012 Sep 21). 10.1016/j.jbi.2012.09.001.
-
(2013)
J. Biomed. Inform.
, vol.46
, Issue.1
, pp. 68-74
-
-
Bejan, C.A.1
Vanderwende, L.2
Xia, F.3
Yetisgen-Yildiz, M.4
-
27
-
-
84977478580
-
Data exploration and visualization of risk factors for heart disease from medical documents using non-negative matrix factorization (NMF)
-
Washington, DC, November 14
-
Yuan Ling, Xingpeng Jiang, Yuan An, Xiaohua Hu, Data exploration and visualization of risk factors for heart disease from medical documents using non-negative matrix factorization (NMF), Presentation at the Seventh i2b2 Shared Task and Workshop: Challenges in Natural Language Processing for Clinical Data, Washington, DC, November 14, 2014.
-
(2014)
Presentation at the Seventh i2b2 Shared Task and Workshop: Challenges in Natural Language Processing for Clinical Data
-
-
Ling, Y.1
Jiang, X.2
An, Y.3
Hu, X.4
-
28
-
-
84940972699
-
Coronary artery disease risk assessment from unstructured electronic health records using text mining
-
Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data.2015
-
Jitendra Jonnagaddala, Siaw-Teng Liaw, Pradeep Ray, Manish Kumar, Nai-Wen Chang, Hong-Jie Dai, Coronary artery disease risk assessment from unstructured electronic health records using text mining. J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data, 2015, 58S (2015) S203-S210, . doi:10.1016/j.jbi.2015.08.003.
-
(2015)
J. Biomed. Inform.
, vol.58S
, pp. S203-S210
-
-
Jonnagaddala, J.1
Liaw, S.-T.2
Ray, P.3
Kumar, M.4
Chang, N.-W.5
Dai, H.-J.6
-
29
-
-
0032510639
-
Prediction of Coronary Heart Disease Using Risk Factor Categories
-
Wilson Peter W.F., D'Agostino Ralph B., Levy Daniel, Belanger Albert M., Silbershatz Halit, Kannel William B. Prediction of Coronary Heart Disease Using Risk Factor Categories. Circulation 1998, 97:1837-1847. 10.1161/01.CIR.97.18.1837.
-
(1998)
Circulation
, vol.97
, pp. 1837-1847
-
-
Wilson, P.W.F.1
D'Agostino, R.B.2
Levy, D.3
Belanger, A.M.4
Silbershatz, H.5
Kannel, W.B.6
-
30
-
-
84951776890
-
A context-aware approach for progression tracking of medical concepts in electronic medical records
-
Chang Nai-Wen, Dai Hong-Jie, Jonnagaddala Jitendra, Chen Chih-Wei, Tzong-Han Tsai Richard, Hsu Wen-Lian A context-aware approach for progression tracking of medical concepts in electronic medical records. J. Biomed. Inform. 2015, 58S:S150-S157. 10.1016/j.jbi.2015.09.013.
-
(2015)
J. Biomed. Inform.
, vol.58S
, pp. S150-S157
-
-
Chang, N.-W.1
Dai, H.-J.2
Jonnagaddala, J.3
Chen, C.-W.4
Tzong-Han Tsai, R.5
Hsu, W.-L.6
-
31
-
-
84946238936
-
Textual inference for eligibility criteria resolution in clinical trials
-
J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data
-
Chaitanya Shivade, Courtney Hebert, Marcelo Lopetegui, Marie-Catherine de Marneffe, Eric Fosler-Lussier, Albert M. Lai, Textual inference for eligibility criteria resolution in clinical trials, J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data, 58S (2015) S211-S218, . doi:10.1016/j.jbi.2015.09.008.
-
(2015)
, vol.58S
, pp. S211-S218
-
-
Shivade, C.1
Hebert, C.2
Lopetegui, M.3
de Marneffe, M.-C.4
Fosler-Lussie, E.5
Lai, A.M.6
-
32
-
-
84939533532
-
Predicting changes in systolic blood pressure using longitudinal patient records
-
Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data
-
John Wes Solomon, Rodney Nielsen, Predicting changes in systolic blood pressure using longitudinal patient records, J. Biomed. Inform., Supplement: 2014 i2b2 Natural Language Processing Challenge in Clinical Data, 58S (2015) S197-S202, . doi:10.1016/j.jbi.2015.06.024.
-
(2015)
J. Biomed. Inform.
, vol.58S
, pp. S197-S202
-
-
Solomon, J.W.1
Nielsen, R.2
-
33
-
-
84911940910
-
Section heading recognition in electronic health records using conditional random fields, Technologies and Applications of Artificial Intelligence
-
Springer
-
Chih-Wei Chen, Nai-Wen Chang, Yung-Chun Chang, Hong-Jie Dai, Section heading recognition in electronic health records using conditional random fields, Technologies and Applications of Artificial Intelligence, Lecture Notes in Computer Science Volume 8916, Springer, 2014, pp. 47-55.
-
(2014)
Lecture Notes in Computer Science
, vol.8916
, pp. 47-55
-
-
Chen, C.-W.1
Chang, N.-W.2
Chang, Y.-C.3
Dai, H.-J.4
-
34
-
-
85089622010
-
Reformatting clinical records based on global layout statistics
-
Proc of SMBM, 2014, Aveiro, Portugal, October 6th-7th
-
P. Zweigenbaum, C. Grouin, Reformatting clinical records based on global layout statistics, in: Proc of SMBM, 2014, Aveiro, Portugal, October 6th-7th, 2014.
-
(2014)
-
-
Zweigenbaum, P.1
Grouin, C.2
|