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Volumn 6, Issue 4, 2015, Pages 1215-1229

Identification of candidate genes for seed glucosinolate content using association mapping in brassica napus l

Author keywords

Association mapping; Brassica napus L; Seed glucosinolate (GS) content; Single nucleotide polymorphism (SNP)

Indexed keywords

GLUCOSINOLATE;

EID: 84947802400     PISSN: None     EISSN: 20734425     Source Type: Journal    
DOI: 10.3390/genes6041215     Document Type: Article
Times cited : (46)

References (44)
  • 1
    • 0035536794 scopus 로고    scopus 로고
    • Agricultural aspects of rape and other Brassica products
    • Walker, K.C.; Booth, E.J. Agricultural aspects of rape and other Brassica products. Eur. J. Lipid Sci. Technol. 2001, 103, 441–446.
    • (2001) Eur. J. Lipid Sci. Technol , vol.103 , pp. 441-446
    • Walker, K.C.1    Booth, E.J.2
  • 2
    • 0032143283 scopus 로고    scopus 로고
    • Current research developments on polyphenolics of rapeseed/canola: A review
    • Naczk, M.; Amarowicz, R.; Sullivan, A.; Shahidi, F. Current research developments on polyphenolics of rapeseed/canola: A review. Food Chem. 1998, 62, 489–502.
    • (1998) Food Chem , vol.62 , pp. 489-502
    • Naczk, M.1    Amarowicz, R.2    Sullivan, A.3    Shahidi, F.4
  • 3
    • 0037331477 scopus 로고    scopus 로고
    • Detection of loci controlling seed glucosinolate content and their association with Sclerotinia resistance in Brassica napus
    • Zhao, J.; Meng, J. Detection of loci controlling seed glucosinolate content and their association with Sclerotinia resistance in Brassica napus. Plant Breed. 2003, 122, 19–23.
    • (2003) Plant Breed , vol.122 , pp. 19-23
    • Zhao, J.1    Meng, J.2
  • 4
    • 0042072811 scopus 로고    scopus 로고
    • Homoeologous loci control the accumulation of seed glucosinolates in oilseed rape (Brassica napus)
    • Howell, P.; Sharpe, A.; Lydiate, D. Homoeologous loci control the accumulation of seed glucosinolates in oilseed rape (Brassica napus). Genome 2003, 46, 454–460.
    • (2003) Genome , vol.46 , pp. 454-460
    • Howell, P.1    Sharpe, A.2    Lydiate, D.3
  • 5
    • 0029106677 scopus 로고
    • Mapping the genome of rapeseed (Brassica napus L.). I. Construction of an RFLP linkage map and localization of QTLs for seed glucosinolate content
    • Uzunova, M.; Ecke, W.; Weissleder, K.; R bbelen, G. Mapping the genome of rapeseed (Brassica napus L.). I. Construction of an RFLP linkage map and localization of QTLs for seed glucosinolate content. Theor. Appl. Genet. 1995, 90, 194–204.
    • (1995) Theor. Appl. Genet , vol.90 , pp. 194-204
    • Uzunova, M.1    Ecke, W.2    Weissleder, K.3    R Bbelen, G.4
  • 6
    • 85019468100 scopus 로고    scopus 로고
    • Quantitative traits loci analysis of seed glucosinolate content in Brassica napus using high-density SNP map (In Chinese)
    • Jian, H.J.; Wei, L.J.; Li, J.N.; Xu, X.F.; Chen, L.; Liu, L.Z. Quantitative traits loci analysis of seed glucosinolate content in Brassica napus using high-density SNP map (In Chinese). Acta Agron. Sin. 2014, 40, 1386–1391.
    • (2014) Acta Agron. Sin , vol.40 , pp. 1386-1391
    • Jian, H.J.1    Wei, L.J.2    Li, J.N.3    Xu, X.F.4    Chen, L.5    Liu, L.Z.6
  • 7
    • 84940613582 scopus 로고    scopus 로고
    • QTL identification on two genetic systems for rapeseed glucosinolate and erucic acid contents over two seasons
    • Xu, J.; Long, Y.; Wu, J.; Xu, H.; Zhao, Z.; Wen, J.; Meng, J.; Shi, C. QTL identification on two genetic systems for rapeseed glucosinolate and erucic acid contents over two seasons. Euphytica 2015, 205, 647–657.
    • (2015) Euphytica , vol.205 , pp. 647-657
    • Xu, J.1    Long, Y.2    Wu, J.3    Xu, H.4    Zhao, Z.5    Wen, J.6    Meng, J.7    Shi, C.8
  • 8
    • 36349031096 scopus 로고    scopus 로고
    • Marker-assisted increase of genetic diversity in a double-low seed quality winter oilseed rape genetic background
    • Basunanda, P.; Spiller, T.; Hasan, M.; Gehringer, A.; Schondelmaier, J.; Lühs, W.; Friedt, W.; Snowdon, R. Marker-assisted increase of genetic diversity in a double-low seed quality winter oilseed rape genetic background. Plant Breed. 2007, 126, 581–587.
    • (2007) Plant Breed , vol.126 , pp. 581-587
    • Basunanda, P.1    Spiller, T.2    Hasan, M.3    Gehringer, A.4    Schondelmaier, J.5    Lühs, W.6    Friedt, W.7    Snowdon, R.8
  • 9
    • 33745879786 scopus 로고    scopus 로고
    • Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 1. Identification of genomic regions from winter germplasm
    • Quijada, P.A.; Udall, J.A.; Lambert, B.; Osborn, T.C. Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 1. Identification of genomic regions from winter germplasm. Theor. Appl. Genet. 2006, 113, 549–561.
    • (2006) Theor. Appl. Genet , vol.113 , pp. 549-561
    • Quijada, P.A.1    Udall, J.A.2    Lambert, B.3    Osborn, T.C.4
  • 10
    • 5144221069 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars
    • Kraakman, A.T.W.; Niks, R.E.; van den Berg, P.M.M.M.; Stam, P.; van Eeuwijk, F.A. Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars. Genetics 2004, 168, 435–446.
    • (2004) Genetics , vol.168 , pp. 435-446
    • Kraakman, A.T.W.1    Niks, R.E.2    Van Den Berg, P.M.M.M.3    Stam, P.4    Van Eeuwijk, F.A.5
  • 11
    • 79952509464 scopus 로고    scopus 로고
    • Association mapping for enhancing maize (Zea mays L.) genetic improvement
    • Yan, J.; Warburton, M.; Crouch, J. Association mapping for enhancing maize (Zea mays L.) genetic improvement. Crop Sci. 2011, 51, 433–449.
    • (2011) Crop Sci , vol.51 , pp. 433-449
    • Yan, J.1    Warburton, M.2    Crouch, J.3
  • 12
    • 77949517584 scopus 로고    scopus 로고
    • Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers
    • Yan, J.B.; Shah, T.; Warburton, M.L.; Buckler, E.S.; McMullen, M.D.; Crouch, J. Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers. PLoS ONE 2009, 4, e8451.
    • (2009) Plos ONE , vol.4
    • Yan, J.B.1    Shah, T.2    Warburton, M.L.3    Buckler, E.S.4    McMullen, M.D.5    Crouch, J.6
  • 13
    • 33947323124 scopus 로고    scopus 로고
    • Association mapping of yield and its components in rice cultivars
    • Agrama, H.; Eizenga, G.; Yan, W. Association mapping of yield and its components in rice cultivars. Mol. Breed. 2007, 19, 341–356.
    • (2007) Mol. Breed , vol.19 , pp. 341-356
    • Agrama, H.1    Eizenga, G.2    Yan, W.3
  • 14
    • 0034055765 scopus 로고    scopus 로고
    • Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci
    • Meuwissen, T.; Goddard, M. Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci. Genetics 2000, 155, 421–430.
    • (2000) Genetics , vol.155 , pp. 421-430
    • Meuwissen, T.1    Goddard, M.2
  • 15
    • 78650522492 scopus 로고    scopus 로고
    • Identification of QTLs for phenolic compounds in oilseed rape (Brassica napus L.) by association mapping using SSR markers
    • Rezaeizad, A.; Wittkop, B.; Snowdon, R.; Hasan, M.; Mohammadi, V.; Zali, A.; Friedt, W. Identification of QTLs for phenolic compounds in oilseed rape (Brassica napus L.) by association mapping using SSR markers. Euphytica 2011, 177, 335–342.
    • (2011) Euphytica , vol.177 , pp. 335-342
    • Rezaeizad, A.1    Wittkop, B.2    Snowdon, R.3    Hasan, M.4    Mohammadi, V.5    Zali, A.6    Friedt, W.7
  • 16
    • 78649239956 scopus 로고    scopus 로고
    • Association mapping of seed oil content in Brassica napus and comparison with quantitative trait loci identified from linkage mapping
    • Zou, J.; Jiang, C.; Cao, Z.; Li, R.; Long, Y.; Chen, S.; Meng, J. Association mapping of seed oil content in Brassica napus and comparison with quantitative trait loci identified from linkage mapping. Genome 2010, 53, 908–916.
    • (2010) Genome , vol.53 , pp. 908-916
    • Zou, J.1    Jiang, C.2    Cao, Z.3    Li, R.4    Long, Y.5    Chen, S.6    Meng, J.7
  • 17
    • 84922421003 scopus 로고    scopus 로고
    • Associative transcriptomics study dissects the genetic architecture of seed glucosinolate content in Brassica napus
    • Lu, G.; Harper, A.L.; Trick, M.; Morgan, C.; Fraser, F.; O’Neill, C.; Bancroft, I. Associative transcriptomics study dissects the genetic architecture of seed glucosinolate content in Brassica napus. DNA Res. 2014, 21, 613–625.
    • (2014) DNA Res , vol.21 , pp. 613-625
    • Lu, G.1    Harper, A.L.2    Trick, M.3    Morgan, C.4    Fraser, F.5    O’Neill, C.6    Bancroft, I.7
  • 18
    • 84906969626 scopus 로고    scopus 로고
    • Genome-wide association study dissects the genetic architecture of seed weight and seed quality in rapeseed (Brassica napus L.)
    • Li, F.; Chen, B.; Xu, K.; Wu, J.; Song, W.; Bancroft, I.; Harper, A.L.; Trick, M.; Liu, S.; Gao, G. Genome-wide association study dissects the genetic architecture of seed weight and seed quality in rapeseed (Brassica napus L.). DNA Res. 2014, 21, 355–367.
    • (2014) DNA Res , vol.21 , pp. 355-367
    • Li, F.1    Chen, B.2    Xu, K.3    Wu, J.4    Song, W.5    Bancroft, I.6    Harper, A.L.7    Trick, M.8    Liu, S.9    Gao, G.10
  • 20
  • 22
    • 84879973766 scopus 로고    scopus 로고
    • Et al.Differential accumulation of phenolic compounds and expression of related genes in black-and yellow-seeded Brassica napus
    • Qu, C.; Fu, F.; Lu, K.; Zhang, K.; Wang, R.; Xu, X.; Wang, M.; Lu, J.; Wan, H.; Zhanglin, T.; et al. Differential accumulation of phenolic compounds and expression of related genes in black-and yellow-seeded Brassica napus. J. Exp. Bot. 2013, 64, 2885–2898.
    • (2013) J. Exp. Bot , vol.64 , pp. 2885-2898
    • Qu, C.1    Fu, F.2    Lu, K.3    Zhang, K.4    Wang, R.5    Xu, X.6    Wang, M.7    Lu, J.8    Wan, H.9    Zhanglin, T.10
  • 24
    • 84947709025 scopus 로고    scopus 로고
    • A genome-wide association study of plant height and primary branch number in Rapeseed (Brassica napus)
    • Li, F.; Chen, B.; Xu, K.; Gao, G.; Yan, G.; Qiao, J.; Li, J.; Li, H.; Li, L.; Xiao, X. A genome-wide association study of plant height and primary branch number in Rapeseed (Brassica napus). Plant Sci. 2015.
    • (2015) Plant Sci
    • Li, F.1    Chen, B.2    Xu, K.3    Gao, G.4    Yan, G.5    Qiao, J.6    Li, J.7    Li, H.8    Li, L.9    Xiao, X.10
  • 25
    • 84929176018 scopus 로고    scopus 로고
    • Unravelling the complex trait of harvest index in rapeseed (Brassica napus L.) with association mapping
    • Luo, X.; Ma, C.; Yue, Y.; Hu, K.; Li, Y.; Duan, Z.; Wu, M.; Tu, J.; Shen, J.; Yi, B. Unravelling the complex trait of harvest index in rapeseed (Brassica napus L.) with association mapping. BMC Genomics 2015.
    • (2015) BMC Genomics
    • Luo, X.1    Ma, C.2    Yue, Y.3    Hu, K.4    Li, Y.5    Duan, Z.6    Wu, M.7    Tu, J.8    Shen, J.9    Yi, B.10
  • 28
    • 84908587274 scopus 로고    scopus 로고
    • Elucidating the role of transport processes in leaf glucosinolate distribution
    • Madsen, S.R.; Olsen, C.E.; Nour-Eldin, H.H.; Halkier, B.A. Elucidating the role of transport processes in leaf glucosinolate distribution. Plant Physiol. 2014, 166, 1450–1462.
    • (2014) Plant Physiol , vol.166 , pp. 1450-1462
    • Madsen, S.R.1    Olsen, C.E.2    Nour-Eldin, H.H.3    Halkier, B.A.4
  • 29
    • 84884695670 scopus 로고    scopus 로고
    • Integration of biosynthesis and long-distance transport establish organ-specific glucosinolate profiles in vegetative Arabidopsis
    • Andersen, T.G.; Nour-Eldin, H.H.; Fuller, V.L.; Olsen, C.E.; Burow, M.; Halkier, B.A. Integration of biosynthesis and long-distance transport establish organ-specific glucosinolate profiles in vegetative Arabidopsis. Plant Cell Online 2013, 25, 3133–3145.
    • (2013) Plant Cell Online , vol.25 , pp. 3133-3145
    • Andersen, T.G.1    Nour-Eldin, H.H.2    Fuller, V.L.3    Olsen, C.E.4    Burow, M.5    Halkier, B.A.6
  • 31
    • 34249809696 scopus 로고    scopus 로고
    • The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana
    • Gigolashvili, T.; Berger, B.; Mock, H.P.; Müller, C.; Weisshaar, B.; Flügge, U.I. The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana. Plant J.2007, 50, 886–901.
    • (2007) Plant J , vol.50 , pp. 886-901
    • Gigolashvili, T.1    Berger, B.2    Mock, H.P.3    Müller, C.4    Weisshaar, B.5    Flügge, U.I.6
  • 33
    • 84900483147 scopus 로고    scopus 로고
    • MYB34, MYB51, and MYB122 distinctly regulate indolic glucosinolate biosynthesis in Arabidopsis thaliana
    • Frerigmann, H.; Gigolashvili, T. MYB34, MYB51, and MYB122 distinctly regulate indolic glucosinolate biosynthesis in Arabidopsis thaliana. Mol. Plant 2014, 7, 814–828.
    • (2014) Mol. Plant , vol.7 , pp. 814-828
    • Frerigmann, H.1    Gigolashvili, T.2
  • 34
    • 84880844952 scopus 로고    scopus 로고
    • MYB transcription factors regulate glucosinolate biosynthesis in different organs of Chinese cabbage (Brassica rapa ssp. pekinensis)
    • Kim, Y.B.; Li, X.; Kim, S.-J.; Kim, H.H.; Lee, J.; Kim, H.; Park, S.U. MYB transcription factors regulate glucosinolate biosynthesis in different organs of Chinese cabbage (Brassica rapa ssp. pekinensis). Molecules 2013, 18, 8682–8695.
    • (2013) Molecules , vol.18 , pp. 8682-8695
    • Kim, Y.B.1    Li, X.2    Kim, S.-J.3    Kim, H.H.4    Lee, J.5    Kim, H.6    Park, S.U.7
  • 36
    • 84882709816 scopus 로고    scopus 로고
    • Targeted silencing of BjMYB28 transcription factor gene directs development of low glucosinolate lines in oilseed Brassica juncea
    • Augustine, R.; Mukhopadhyay, A.; Bisht, N.C. Targeted silencing of BjMYB28 transcription factor gene directs development of low glucosinolate lines in oilseed Brassica juncea. Plant Biotechnol. J. 2013, 11, 855–866.
    • (2013) Plant Biotechnol. J , vol.11 , pp. 855-866
    • Augustine, R.1    Mukhopadhyay, A.2    Bisht, N.C.3
  • 37
    • 84877938378 scopus 로고    scopus 로고
    • BZR1 andBES1 participate in regulation of glucosinolate biosynthesis by brassinosteroids in Arabidopsis
    • Guo, R.; Qian, H.; Shen, W.; Liu, L.; Zhang, M.; Cai, C.; Zhao, Y.; Qiao, J.; Wang, Q. BZR1 andBES1 participate in regulation of glucosinolate biosynthesis by brassinosteroids in Arabidopsis. J. Exp. Bot. 2013, 64, 2401–2412.
    • (2013) J. Exp. Bot , vol.64 , pp. 2401-2412
    • Guo, R.1    Qian, H.2    Shen, W.3    Liu, L.4    Zhang, M.5    Cai, C.6    Zhao, Y.7    Qiao, J.8    Wang, Q.9
  • 39
    • 84947766027 scopus 로고    scopus 로고
    • (accessed on 22 September 2015)
    • The Manufacture’s Protocol of BeadChips. Available online: http://www.illumina.com/technology/infinium_hd_assay.ilmn (accessed on 22 September 2015).
    • The Manufacture’s Protocol of Beadchips
  • 40
    • 33846933954 scopus 로고    scopus 로고
    • Methods for linkage disequilibrium mapping in crops
    • Mackay, I.; Powell, W. Methods for linkage disequilibrium mapping in crops. Trends Plant Sci.2007, 12, 57–63.
    • (2007) Trends Plant Sci , vol.12 , pp. 57-63
    • Mackay, I.1    Powell, W.2
  • 41
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard, J.K.; Stephens, M.; Donnelly, P. Inference of population structure using multilocus genotype data. Genetics 2000, 155, 945–959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 42
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno, G.; Regnaut, S.; Goudet, J. Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study. Mol. Ecol. 2005, 14, 2611–2620.
    • (2005) Mol. Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 43
    • 84871345497 scopus 로고    scopus 로고
    • (accessed on 22 September 2015)
    • The Arabidopsis Information Resource (TAIR). Available online: http://www.arabidopsis.org/index.jsp (accessed on 22 September 2015).
    • The Arabidopsis Information Resource (TAIR)
  • 44
    • 77949356583 scopus 로고    scopus 로고
    • Comparison of five endogenous reference genes for specific PCR detection and quantification of Brassica napus
    • Wu, G.; Li, Z.; Yuhua, W.; Yinglong, C.; Changming, L. Comparison of five endogenous reference genes for specific PCR detection and quantification of Brassica napus. J. Agric. Food Chem. 2010, 58, 2812–2817.
    • (2010) J. Agric. Food Chem , vol.58 , pp. 2812-2817
    • Wu, G.1    Li, Z.2    Yuhua, W.3    Yinglong, C.4    Changming, L.5


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