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Volumn 108, Issue 3, 2015, Pages 585-595

Simulations show that virus assembly and budding are facilitated by membrane microdomains

Author keywords

[No Author keywords available]

Indexed keywords

MIRIDAE;

EID: 84947201450     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2014.12.017     Document Type: Article
Times cited : (35)

References (99)
  • 1
    • 79953740665 scopus 로고    scopus 로고
    • Thermodynamics and mechanics of membrane curvature generation and sensing by proteins and lipids
    • T. Baumgart, and B.R. Capraro S.L. Das Thermodynamics and mechanics of membrane curvature generation and sensing by proteins and lipids Annu. Rev. Phys. Chem. 62 2011 483 506
    • (2011) Annu. Rev. Phys. Chem. , vol.62 , pp. 483-506
    • Baumgart, T.1    Capraro, B.R.2    Das, S.L.3
  • 2
    • 80455174164 scopus 로고    scopus 로고
    • Shaping membranes for endocytosis
    • S.G. Amara, E. Bamberg, B.K. Fleischmann, T. Gudermann, R. Jahn, W.J. Lederer, R. Lill, B. Nilius, S. Offermanns, Springer Berlin, Germany
    • M. Krauss, and V. Haucke Shaping membranes for endocytosis S.G. Amara, E. Bamberg, B.K. Fleischmann, T. Gudermann, R. Jahn, W.J. Lederer, R. Lill, B. Nilius, S. Offermanns, Reviews of Physiology, Biochemistry and Pharmacology Vol. 161 2011 Springer Berlin, Germany 45 66
    • (2011) Reviews of Physiology, Biochemistry and Pharmacology , vol.161 VOL. , pp. 45-66
    • Krauss, M.1    Haucke, V.2
  • 5
    • 34248229690 scopus 로고    scopus 로고
    • More than one door - Budding of enveloped viruses through cellular membranes
    • S. Welsch, B. Müller, and H.-G. Kräusslich More than one door - budding of enveloped viruses through cellular membranes FEBS Lett. 581 2007 2089 2097
    • (2007) FEBS Lett. , vol.581 , pp. 2089-2097
    • Welsch, S.1    Müller, B.2    Kräusslich, H.-G.3
  • 6
    • 28044439862 scopus 로고    scopus 로고
    • Membrane deformations induced by the matrix protein of vesicular stomatitis virus in a minimal system
    • J. Solon, and O. Gareil Y. Gaudin Membrane deformations induced by the matrix protein of vesicular stomatitis virus in a minimal system J. Gen. Virol. 86 2005 3357 3363
    • (2005) J. Gen. Virol. , vol.86 , pp. 3357-3363
    • Solon, J.1    Gareil, O.2    Gaudin, Y.3
  • 7
    • 0029933250 scopus 로고    scopus 로고
    • Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes
    • H. Vennema, and G.J. Godeke P.J. Rottier Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes EMBO J. 15 1996 2020 2028
    • (1996) EMBO J. , vol.15 , pp. 2020-2028
    • Vennema, H.1    Godeke, G.J.2    Rottier, P.J.3
  • 9
    • 79952088584 scopus 로고    scopus 로고
    • The role of lipids in retrovirus replication
    • A.A. Waheed, and E.O. Freed The role of lipids in retrovirus replication Viruses 2 2010 1146 1180
    • (2010) Viruses , vol.2 , pp. 1146-1180
    • Waheed, A.A.1    Freed, E.O.2
  • 10
    • 79952069060 scopus 로고    scopus 로고
    • Influenza virus assembly and budding
    • J.S. Rossman, and R.A. Lamb Influenza virus assembly and budding Virology 411 2011 229 236
    • (2011) Virology , vol.411 , pp. 229-236
    • Rossman, J.S.1    Lamb, R.A.2
  • 11
    • 80051876147 scopus 로고    scopus 로고
    • Alphaviruses in gene therapy
    • K. Lundstrom Alphaviruses in gene therapy Viruses 1 2009 13 25
    • (2009) Viruses , vol.1 , pp. 13-25
    • Lundstrom, K.1
  • 12
    • 84872141121 scopus 로고    scopus 로고
    • The packaging of different cargo into enveloped viral nanoparticles
    • F. Cheng, and I.B. Tsvetkova S. Mukhopadhyay The packaging of different cargo into enveloped viral nanoparticles Mol. Pharm. 10 2013 51 58
    • (2013) Mol. Pharm. , vol.10 , pp. 51-58
    • Cheng, F.1    Tsvetkova, I.B.2    Mukhopadhyay, S.3
  • 13
    • 77952311664 scopus 로고    scopus 로고
    • Oncolytic viruses move forward in clinical trials
    • K. Rowan Oncolytic viruses move forward in clinical trials J. Natl. Cancer Inst. 102 2010 590 595
    • (2010) J. Natl. Cancer Inst. , vol.102 , pp. 590-595
    • Rowan, K.1
  • 15
    • 84865142815 scopus 로고    scopus 로고
    • Mechanisms of budding of nanoscale particles through lipid bilayers
    • T. Ruiz-Herrero, E. Velasco, and M.F. Hagan Mechanisms of budding of nanoscale particles through lipid bilayers J. Phys. Chem. B 116 2012 9595 9603
    • (2012) J. Phys. Chem. B , vol.116 , pp. 9595-9603
    • Ruiz-Herrero, T.1    Velasco, E.2    Hagan, M.F.3
  • 16
    • 79961188661 scopus 로고    scopus 로고
    • The effect of interactions on the cellular uptake of nanoparticles
    • A. Chaudhuri, G. Battaglia, and R. Golestanian The effect of interactions on the cellular uptake of nanoparticles Phys. Biol. 8 2011 04600
    • (2011) Phys. Biol. , vol.8 , pp. 04600
    • Chaudhuri, A.1    Battaglia, G.2    Golestanian, R.3
  • 17
    • 0037198824 scopus 로고    scopus 로고
    • Adhesion and wrapping in colloid-vesicle complexes
    • M. Deserno, and W.M. Gelbart Adhesion and wrapping in colloid-vesicle complexes J. Phys. Chem. B 106 2002 5543 5552
    • (2002) J. Phys. Chem. B , vol.106 , pp. 5543-5552
    • Deserno, M.1    Gelbart, W.M.2
  • 18
    • 0038116918 scopus 로고    scopus 로고
    • Wrapping of a spherical colloid by a fluid membrane
    • M. Deserno, and T. Bickel Wrapping of a spherical colloid by a fluid membrane Europhys. Lett. 62 2003 767
    • (2003) Europhys. Lett. , vol.62 , pp. 767
    • Deserno, M.1    Bickel, T.2
  • 19
    • 42749105111 scopus 로고    scopus 로고
    • Elastic deformation of a fluid membrane upon colloid binding
    • M. Deserno Elastic deformation of a fluid membrane upon colloid binding Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 69 2004 031903
    • (2004) Phys. Rev. e Stat. Nonlin. Soft Matter Phys. , vol.69 , pp. 031903
    • Deserno, M.1
  • 20
    • 70349301623 scopus 로고    scopus 로고
    • Monte Carlo simulations of complex formation between a mixed fluid vesicle and a charged colloid
    • M. Fošnarič, and A. Iglič S. May Monte Carlo simulations of complex formation between a mixed fluid vesicle and a charged colloid J. Chem. Phys. 131 2009 105103
    • (2009) J. Chem. Phys. , vol.131 , pp. 105103
    • Fošnarič, M.1    Iglič, A.2    May, S.3
  • 21
    • 38049125209 scopus 로고    scopus 로고
    • Modeling the thermodynamics of the interaction of nanoparticles with cell membranes
    • V.V. Ginzburg, and S. Balijepalli Modeling the thermodynamics of the interaction of nanoparticles with cell membranes Nano Lett. 7 2007 3716 3722
    • (2007) Nano Lett. , vol.7 , pp. 3716-3722
    • Ginzburg, V.V.1    Balijepalli, S.2
  • 22
    • 40449122796 scopus 로고    scopus 로고
    • Nanoparticle-mediated cellular response is size-dependent
    • W. Jiang, and B.Y.S. Kim W.C.W. Chan Nanoparticle-mediated cellular response is size-dependent Nat. Nanotechnol. 3 2008 145 150
    • (2008) Nat. Nanotechnol. , vol.3 , pp. 145-150
    • Jiang, W.1    Kim, B.Y.S.2    Chan, W.C.W.3
  • 23
    • 77958093257 scopus 로고    scopus 로고
    • A simple method to evaluate the optimal size of nanoparticles for endocytosis based on kinetic diffusion of receptors
    • X. Li, and D. Xing A simple method to evaluate the optimal size of nanoparticles for endocytosis based on kinetic diffusion of receptors Appl. Phys. Lett. 97 2010 153704
    • (2010) Appl. Phys. Lett. , vol.97 , pp. 153704
    • Li, X.1    Xing, D.2
  • 24
    • 77749279963 scopus 로고    scopus 로고
    • Thermodynamics of charged nanoparticle adsorption on charge-neutral membranes: A simulation study
    • Y. Li, and N. Gu Thermodynamics of charged nanoparticle adsorption on charge-neutral membranes: a simulation study J. Phys. Chem. B 114 2010 2749 2754
    • (2010) J. Phys. Chem. B , vol.114 , pp. 2749-2754
    • Li, Y.1    Gu, N.2
  • 25
    • 34548411407 scopus 로고    scopus 로고
    • Designing synthetic vesicles that engulf nanoscopic particles
    • K.A. Smith, D. Jasnow, and A.C. Balazs Designing synthetic vesicles that engulf nanoscopic particles J. Chem. Phys. 127 2007 084703
    • (2007) J. Chem. Phys. , vol.127 , pp. 084703
    • Smith, K.A.1    Jasnow, D.2    Balazs, A.C.3
  • 26
    • 1942423643 scopus 로고    scopus 로고
    • A statistical-thermodynamic model of viral budding
    • S. Tzlil, and M. Deserno A. Ben-Shaul A statistical-thermodynamic model of viral budding Biophys. J. 86 2004 2037 2048
    • (2004) Biophys. J. , vol.86 , pp. 2037-2048
    • Tzlil, S.1    Deserno, M.2    Ben-Shaul, A.3
  • 27
    • 83655190545 scopus 로고    scopus 로고
    • Receptor-mediated endocytosis of nanoparticles of various shapes
    • R. Vácha, F.J. Martinez-Veracoechea, and D. Frenkel Receptor-mediated endocytosis of nanoparticles of various shapes Nano Lett. 11 2011 5391 5395
    • (2011) Nano Lett. , vol.11 , pp. 5391-5395
    • Vácha, R.1    Martinez-Veracoechea, F.J.2    Frenkel, D.3
  • 28
    • 79960726867 scopus 로고    scopus 로고
    • Wrapping and internalization of nanoparticles by lipid bilayers: A computer simulation study
    • K. Yang, and Y.-q. Ma Wrapping and internalization of nanoparticles by lipid bilayers: a computer simulation study Aust. J. Chem. 64 2011 894
    • (2011) Aust. J. Chem. , vol.64 , pp. 894
    • Yang, K.1    Ma, Y.-Q.2
  • 29
    • 84894202184 scopus 로고    scopus 로고
    • Shape and orientation matter for the cellular uptake of nonspherical particles
    • S. Dasgupta, T. Auth, and G. Gompper Shape and orientation matter for the cellular uptake of nonspherical particles Nano Lett. 14 2014 687 693
    • (2014) Nano Lett. , vol.14 , pp. 687-693
    • Dasgupta, S.1    Auth, T.2    Gompper, G.3
  • 30
    • 84878150480 scopus 로고    scopus 로고
    • Wrapping of ellipsoidal nano-particles by fluid membranes
    • S. Dasgupta, T. Auth, and G. Gompper Wrapping of ellipsoidal nano-particles by fluid membranes Soft Matter 9 2013 5473 5482
    • (2013) Soft Matter , vol.9 , pp. 5473-5482
    • Dasgupta, S.1    Auth, T.2    Gompper, G.3
  • 31
    • 34249325178 scopus 로고    scopus 로고
    • Aggregation and vesiculation of membrane proteins by curvature-mediated interactions
    • B.J. Reynwar, and G. Illya M. Deserno Aggregation and vesiculation of membrane proteins by curvature-mediated interactions Nature 447 2007 461 464
    • (2007) Nature , vol.447 , pp. 461-464
    • Reynwar, B.J.1    Illya, G.2    Deserno, M.3
  • 32
    • 56649101921 scopus 로고    scopus 로고
    • Model of human immunodeficiency virus budding and self-assembly: Role of the cell membrane
    • R. Zhang, and T.T. Nguyen Model of human immunodeficiency virus budding and self-assembly: role of the cell membrane Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 78 2008 051903
    • (2008) Phys. Rev. e Stat. Nonlin. Soft Matter Phys. , vol.78 , pp. 051903
    • Zhang, R.1    Nguyen, T.T.2
  • 33
    • 84901997385 scopus 로고    scopus 로고
    • Shape and energy of a membrane bud induced by protein coats or viral protein assembly
    • L. Foret Shape and energy of a membrane bud induced by protein coats or viral protein assembly Eur. Phys. J. E Soft Matter 37 2014 42
    • (2014) Eur. Phys. J. e Soft Matter , vol.37 , pp. 42
    • Foret, L.1
  • 34
    • 84868022359 scopus 로고    scopus 로고
    • Influence of fluctuating membranes on self-assembly of patchy colloids
    • R. Matthews, and C. Likos Influence of fluctuating membranes on self-assembly of patchy colloids Phys. Rev. Lett. 109 2012 178302
    • (2012) Phys. Rev. Lett. , vol.109 , pp. 178302
    • Matthews, R.1    Likos, C.2
  • 35
    • 84878772477 scopus 로고    scopus 로고
    • Structures and pathways for clathrin self-assembly in the bulk and on membranes
    • R. Matthews, and C.N. Likos Structures and pathways for clathrin self-assembly in the bulk and on membranes Soft Matter 9 2013 5794 5806
    • (2013) Soft Matter , vol.9 , pp. 5794-5806
    • Matthews, R.1    Likos, C.N.2
  • 36
    • 84880151374 scopus 로고    scopus 로고
    • Dynamics of self-assembly of model viral capsids in the presence of a fluctuating membrane
    • R. Matthews, and C.N. Likos Dynamics of self-assembly of model viral capsids in the presence of a fluctuating membrane J. Phys. Chem. B 117 2013 8283 8292
    • (2013) J. Phys. Chem. B , vol.117 , pp. 8283-8292
    • Matthews, R.1    Likos, C.N.2
  • 37
    • 33644848399 scopus 로고    scopus 로고
    • Molecular dynamics simulations of the complete satellite tobacco mosaic virus
    • P.L. Freddolino, and A.S. Arkhipov K. Schulten Molecular dynamics simulations of the complete satellite tobacco mosaic virus Structure 14 2006 437 449
    • (2006) Structure , vol.14 , pp. 437-449
    • Freddolino, P.L.1    Arkhipov, A.S.2    Schulten, K.3
  • 38
    • 0031737889 scopus 로고    scopus 로고
    • Local rules simulation of the kinetics of virus capsid self-assembly
    • R. Schwartz, and P.W. Shor B. Berger Local rules simulation of the kinetics of virus capsid self-assembly Biophys. J. 75 1998 2626 2636
    • (1998) Biophys. J. , vol.75 , pp. 2626-2636
    • Schwartz, R.1    Shor, P.W.2    Berger, B.3
  • 39
    • 33745787907 scopus 로고    scopus 로고
    • Dynamic pathways for viral capsid assembly
    • M.F. Hagan, and D. Chandler Dynamic pathways for viral capsid assembly Biophys. J. 91 2006 42 54
    • (2006) Biophys. J. , vol.91 , pp. 42-54
    • Hagan, M.F.1    Chandler, D.2
  • 41
    • 33847712647 scopus 로고    scopus 로고
    • Deciphering the kinetic mechanism of spontaneous self-assembly of icosahedral capsids
    • H.D. Nguyen, V.S. Reddy, and C.L. Brooks III Deciphering the kinetic mechanism of spontaneous self-assembly of icosahedral capsids Nano Lett. 7 2007 338 344
    • (2007) Nano Lett. , vol.7 , pp. 338-344
    • Nguyen, H.D.1    Reddy, V.S.2    Brooks, C.L.3
  • 42
    • 34548455021 scopus 로고    scopus 로고
    • Reversible self-assembly of patchy particles into monodisperse icosahedral clusters
    • A.W. Wilber, and J.P.K. Doye P. Wong Reversible self-assembly of patchy particles into monodisperse icosahedral clusters J. Chem. Phys. 127 2007 085106
    • (2007) J. Chem. Phys. , vol.127 , pp. 085106
    • Wilber, A.W.1    Doye, J.P.K.2    Wong, P.3
  • 43
    • 61649113957 scopus 로고    scopus 로고
    • Generalized structural polymorphism in self-assembled viral particles
    • H.D. Nguyen, and C.L. Brooks III Generalized structural polymorphism in self-assembled viral particles Nano Lett. 8 2008 4574 4581
    • (2008) Nano Lett. , vol.8 , pp. 4574-4581
    • Nguyen, H.D.1    Brooks, C.L.2
  • 44
    • 67749130949 scopus 로고    scopus 로고
    • Invariant polymorphism in virus capsid assembly
    • H.D. Nguyen, V.S. Reddy, and C.L. Brooks III Invariant polymorphism in virus capsid assembly J. Am. Chem. Soc. 131 2009 2606 2614
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 2606-2614
    • Nguyen, H.D.1    Reddy, V.S.2    Brooks, C.L.3
  • 46
    • 70449413366 scopus 로고    scopus 로고
    • Monodisperse self-assembly in a model with protein-like interactions
    • A.W. Wilber, and J.P.K. Doye A.C.F. Lewis Monodisperse self-assembly in a model with protein-like interactions J. Chem. Phys. 131 2009 175102
    • (2009) J. Chem. Phys. , vol.131 , pp. 175102
    • Wilber, A.W.1    Doye, J.P.K.2    Lewis, A.C.F.3
  • 47
    • 70449365061 scopus 로고    scopus 로고
    • Self-assembly of monodisperse clusters: Dependence on target geometry
    • A.W. Wilber, J.P.K. Doye, and A.A. Louis Self-assembly of monodisperse clusters: dependence on target geometry J. Chem. Phys. 131 2009 175101
    • (2009) J. Chem. Phys. , vol.131 , pp. 175101
    • Wilber, A.W.1    Doye, J.P.K.2    Louis, A.A.3
  • 48
    • 0033184831 scopus 로고    scopus 로고
    • Supramolecular self-assembly: Molecular dynamics modeling of polyhedral shell formation
    • D. Rapaport, J. Johnson, and J. Skolnick Supramolecular self-assembly: molecular dynamics modeling of polyhedral shell formation Comput. Phys. Commun. 121-122 1999 231 235
    • (1999) Comput. Phys. Commun. , vol.121-122 , pp. 231-235
    • Rapaport, D.1    Johnson, J.2    Skolnick, J.3
  • 49
    • 38349040438 scopus 로고    scopus 로고
    • Self-assembly of polyhedral shells: A molecular dynamics study
    • D.C. Rapaport Self-assembly of polyhedral shells: a molecular dynamics study Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 70 2004 051905
    • (2004) Phys. Rev. e Stat. Nonlin. Soft Matter Phys. , vol.70 , pp. 051905
    • Rapaport, D.C.1
  • 50
    • 55149103754 scopus 로고    scopus 로고
    • Role of reversibility in viral capsid growth: A paradigm for self-assembly
    • D.C. Rapaport Role of reversibility in viral capsid growth: a paradigm for self-assembly Phys. Rev. Lett. 101 2008 186101
    • (2008) Phys. Rev. Lett. , vol.101 , pp. 186101
    • Rapaport, D.C.1
  • 51
    • 80052957030 scopus 로고    scopus 로고
    • Mechanisms of kinetic trapping in self-assembly and phase transformation
    • M.F. Hagan, O.M. Elrad, and R.L. Jack Mechanisms of kinetic trapping in self-assembly and phase transformation J. Chem. Phys. 135 2011 104115
    • (2011) J. Chem. Phys. , vol.135 , pp. 104115
    • Hagan, M.F.1    Elrad, O.M.2    Jack, R.L.3
  • 52
    • 78349258978 scopus 로고    scopus 로고
    • Multiscale computer simulation of the immature HIV-1 virion
    • G.S. Ayton, and G.A. Voth Multiscale computer simulation of the immature HIV-1 virion Biophys. J. 99 2010 2757 2765
    • (2010) Biophys. J. , vol.99 , pp. 2757-2765
    • Ayton, G.S.1    Voth, G.A.2
  • 53
    • 79960302607 scopus 로고    scopus 로고
    • Simulated self-assembly of the HIV-1 capsid: Protein shape and native contacts are sufficient for two-dimensional lattice formation
    • B. Chen, and R. Tycko Simulated self-assembly of the HIV-1 capsid: protein shape and native contacts are sufficient for two-dimensional lattice formation Biophys. J. 100 2011 3035 3044
    • (2011) Biophys. J. , vol.100 , pp. 3035-3044
    • Chen, B.1    Tycko, R.2
  • 54
    • 84879301280 scopus 로고    scopus 로고
    • Viral genome structures are optimal for capsid assembly
    • J.D. Perlmutter, C. Qiao, and M.F. Hagan Viral genome structures are optimal for capsid assembly eLife 2 2013 e00632
    • (2013) ELife , vol.2 , pp. e00632
    • Perlmutter, J.D.1    Qiao, C.2    Hagan, M.F.3
  • 55
    • 79551478383 scopus 로고    scopus 로고
    • Encapsulation of a polymer by an icosahedral virus
    • O.M. Elrad, and M.F. Hagan Encapsulation of a polymer by an icosahedral virus Phys. Biol. 7 2010 045003
    • (2010) Phys. Biol. , vol.7 , pp. 045003
    • Elrad, O.M.1    Hagan, M.F.2
  • 56
    • 84861706182 scopus 로고    scopus 로고
    • Langevin dynamics simulation of polymer-assisted virus-like assembly
    • J.P. Mahalik, and M. Muthukumar Langevin dynamics simulation of polymer-assisted virus-like assembly J. Chem. Phys. 136 2012 135101
    • (2012) J. Chem. Phys. , vol.136 , pp. 135101
    • Mahalik, J.P.1    Muthukumar, M.2
  • 57
    • 84887034184 scopus 로고    scopus 로고
    • Icosahedral capsid formation by capsomers and short polyions
    • R. Zhang, and P. Linse Icosahedral capsid formation by capsomers and short polyions J. Chem. Phys. 138 2013 154901
    • (2013) J. Chem. Phys. , vol.138 , pp. 154901
    • Zhang, R.1    Linse, P.2
  • 58
    • 29144473001 scopus 로고    scopus 로고
    • Solvent-free model for self-assembling fluid bilayer membranes: Stabilization of the fluid phase based on broad attractive tail potentials
    • I.R. Cooke, and M. Deserno Solvent-free model for self-assembling fluid bilayer membranes: stabilization of the fluid phase based on broad attractive tail potentials J. Chem. Phys. 123 2005 224710
    • (2005) J. Chem. Phys. , vol.123 , pp. 224710
    • Cooke, I.R.1    Deserno, M.2
  • 59
    • 12944264524 scopus 로고    scopus 로고
    • The energy landscape as a unifying theme in molecular science
    • D.J. Wales The energy landscape as a unifying theme in molecular science Philos. Trans. A Math. Phys. Eng. Sci 363 2005 357 377
    • (2005) Philos. Trans. A Math. Phys. Eng. Sci , vol.363 , pp. 357-377
    • Wales, D.J.1
  • 60
    • 62349124904 scopus 로고    scopus 로고
    • Energy landscapes for shells assembled from pentagonal and hexagonal pyramids
    • S.N. Fejer, and T.R. James D.J. Wales Energy landscapes for shells assembled from pentagonal and hexagonal pyramids Phys. Chem. Chem. Phys. 11 2009 2098 2104
    • (2009) Phys. Chem. Chem. Phys. , vol.11 , pp. 2098-2104
    • Fejer, S.N.1    James, T.R.2    Wales, D.J.3
  • 61
    • 79952229154 scopus 로고    scopus 로고
    • Retroviral matrix and lipids, the intimate interaction
    • E. Hamard-Peron, and D. Muriaux Retroviral matrix and lipids, the intimate interaction Retrovirology 8 2011 15
    • (2011) Retrovirology , vol.8 , pp. 15
    • Hamard-Peron, E.1    Muriaux, D.2
  • 62
    • 0036827828 scopus 로고    scopus 로고
    • Nucleic acid-independent retrovirus assembly can be driven by dimerization
    • M.C. Johnson, and H.M. Scobie V.M. Vogt Nucleic acid-independent retrovirus assembly can be driven by dimerization J. Virol. 76 2002 11177 11185
    • (2002) J. Virol. , vol.76 , pp. 11177-11185
    • Johnson, M.C.1    Scobie, H.M.2    Vogt, V.M.3
  • 63
    • 79953323443 scopus 로고    scopus 로고
    • Live-cell visualization of dynamics of HIV budding site interactions with an ESCRT component
    • V. Baumgärtel, and S. Ivanchenko D.C. Lamb Live-cell visualization of dynamics of HIV budding site interactions with an ESCRT component Nat. Cell Biol. 13 2011 469 474
    • (2011) Nat. Cell Biol. , vol.13 , pp. 469-474
    • Baumgärtel, V.1    Ivanchenko, S.2    Lamb, D.C.3
  • 64
    • 41249087856 scopus 로고    scopus 로고
    • General purpose molecular dynamics simulations fully implemented on graphics processing units
    • J.A. Anderson, C.D. Lorenz, and A. Travesset General purpose molecular dynamics simulations fully implemented on graphics processing units J. Comput. Phys. 227 2008 5342 5359
    • (2008) J. Comput. Phys. , vol.227 , pp. 5342-5359
    • Anderson, J.A.1    Lorenz, C.D.2    Travesset, A.3
  • 65
    • 79961021801 scopus 로고    scopus 로고
    • Rigid body constraints realized in massively-parallel molecular dynamics on graphics processing units
    • T.D. Nguyen, and C.L. Phillips S.C. Glotzer Rigid body constraints realized in massively-parallel molecular dynamics on graphics processing units Comput. Phys. Commun. 182 2011 2307 2313
    • (2011) Comput. Phys. Commun. , vol.182 , pp. 2307-2313
    • Nguyen, T.D.1    Phillips, C.L.2    Glotzer, S.C.3
  • 66
    • 36749107785 scopus 로고
    • Molecular dynamics simulations at constant pressure and/or temperature
    • H.C. Andersen Molecular dynamics simulations at constant pressure and/or temperature J. Chem. Phys. 72 1980 2384
    • (1980) J. Chem. Phys. , vol.72 , pp. 2384
    • Andersen, H.C.1
  • 67
    • 66249104660 scopus 로고    scopus 로고
    • Mesoscopic membrane physics: Concepts, simulations, and selected applications
    • M. Deserno Mesoscopic membrane physics: concepts, simulations, and selected applications Macromol. Rapid Commun. 30 2009 752 771
    • (2009) Macromol. Rapid Commun. , vol.30 , pp. 752-771
    • Deserno, M.1
  • 69
    • 74849118341 scopus 로고    scopus 로고
    • Lipid rafts as a membrane-organizing principle
    • D. Lingwood, and K. Simons Lipid rafts as a membrane-organizing principle Science 327 2010 46 50
    • (2010) Science , vol.327 , pp. 46-50
    • Lingwood, D.1    Simons, K.2
  • 70
    • 85028119064 scopus 로고    scopus 로고
    • Virus assembly and plasma membrane domains: Which came first?
    • A. Kerviel, and A. Thomas D. Muriaux Virus assembly and plasma membrane domains: which came first? Virus Res. 171 2013 332 340
    • (2013) Virus Res. , vol.171 , pp. 332-340
    • Kerviel, A.1    Thomas, A.2    Muriaux, D.3
  • 71
    • 84876934637 scopus 로고    scopus 로고
    • Formation of raft-like assemblies within clusters of influenza hemagglutinin observed by MD simulations
    • D.L. Parton, and A. Tek M.S.P. Sansom Formation of raft-like assemblies within clusters of influenza hemagglutinin observed by MD simulations PLOS Comput. Biol. 9 2013 e1003034
    • (2013) PLOS Comput. Biol. , vol.9 , pp. e1003034
    • Parton, D.L.1    Tek, A.2    Sansom, M.S.P.3
  • 73
    • 84903731786 scopus 로고    scopus 로고
    • Modeling viral capsid assembly
    • M.F. Hagan Modeling viral capsid assembly Adv. Chem. Phys. 155 2014 1 68
    • (2014) Adv. Chem. Phys. , vol.155 , pp. 1-68
    • Hagan, M.F.1
  • 74
    • 80051615759 scopus 로고    scopus 로고
    • New insights into HIV assembly and trafficking
    • M. Balasubramaniam, and E.O. Freed New insights into HIV assembly and trafficking Physiology (Bethesda) 26 2011 236 251
    • (2011) Physiology (Bethesda) , vol.26 , pp. 236-251
    • Balasubramaniam, M.1    Freed, E.O.2
  • 75
    • 77955204579 scopus 로고    scopus 로고
    • Mechanisms of capsid assembly around a polymer
    • A. Kivenson, and M.F. Hagan Mechanisms of capsid assembly around a polymer Biophys. J. 99 2010 619 628
    • (2010) Biophys. J. , vol.99 , pp. 619-628
    • Kivenson, A.1    Hagan, M.F.2
  • 76
    • 84906257465 scopus 로고    scopus 로고
    • Pathways for virus assembly around nucleic acids
    • J.D. Perlmutter, M.R. Perkett, and M.F. Hagan Pathways for virus assembly around nucleic acids J. Mol. Biol. 426 2014 3148 3165
    • (2014) J. Mol. Biol. , vol.426 , pp. 3148-3165
    • Perlmutter, J.D.1    Perkett, M.R.2    Hagan, M.F.3
  • 78
    • 0027294580 scopus 로고
    • Domain-induced budding of fluid membranes
    • R. Lipowsky Domain-induced budding of fluid membranes Biophys. J. 64 1993 1133 1138
    • (1993) Biophys. J. , vol.64 , pp. 1133-1138
    • Lipowsky, R.1
  • 79
    • 33645992810 scopus 로고    scopus 로고
    • Classical nucleation theory of virus capsids
    • R. Zandi, and P. van der Schoot H. Reiss Classical nucleation theory of virus capsids Biophys. J. 90 2006 1939 1948
    • (2006) Biophys. J. , vol.90 , pp. 1939-1948
    • Zandi, R.1    Van Der Schoot, P.2    Reiss, H.3
  • 80
    • 83455177154 scopus 로고    scopus 로고
    • Analyzing mechanisms and microscopic reversibility of self-assembly
    • J. Grant, R.L. Jack, and S. Whitelam Analyzing mechanisms and microscopic reversibility of self-assembly J. Chem. Phys. 135 2011 214505
    • (2011) J. Chem. Phys. , vol.135 , pp. 214505
    • Grant, J.1    Jack, R.L.2    Whitelam, S.3
  • 81
    • 79551501748 scopus 로고    scopus 로고
    • Modeling capsid self-assembly: Design and analysis
    • D.C. Rapaport Modeling capsid self-assembly: design and analysis Phys. Biol. 7 2010 045001
    • (2010) Phys. Biol. , vol.7 , pp. 045001
    • Rapaport, D.C.1
  • 82
    • 84881068557 scopus 로고    scopus 로고
    • Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck
    • A.N. Becalska, and C.F. Kelley A.A. Rodal Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck Mol. Biol. Cell. 24 2013 2406 2418
    • (2013) Mol. Biol. Cell. , vol.24 , pp. 2406-2418
    • Becalska, A.N.1    Kelley, C.F.2    Rodal, A.A.3
  • 83
    • 84882290578 scopus 로고    scopus 로고
    • COPI buds 60-nm lipid droplets from reconstituted water-phospholipid-triacylglyceride interfaces, suggesting a tension clamp function
    • A.R. Thiam, and B. Antonny F. Pincet COPI buds 60-nm lipid droplets from reconstituted water-phospholipid-triacylglyceride interfaces, suggesting a tension clamp function Proc. Natl. Acad. Sci. USA 110 2013 13244 13249
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 13244-13249
    • Thiam, A.R.1    Antonny, B.2    Pincet, F.3
  • 84
    • 55949131570 scopus 로고    scopus 로고
    • COPI coat assembly occurs on liquid-disordered domains and the associated membrane deformations are limited by membrane tension
    • J.-B. Manneville, and J.-F. Casella B. Goud COPI coat assembly occurs on liquid-disordered domains and the associated membrane deformations are limited by membrane tension Proc. Natl. Acad. Sci. USA 105 2008 16946 16951
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 16946-16951
    • Manneville, J.-B.1    Casella, J.-F.2    Goud, B.3
  • 85
    • 0038617775 scopus 로고    scopus 로고
    • Flavivirus capsid is a dimeric α-helical protein
    • C.T. Jones, and L. Ma R.J. Kuhn Flavivirus capsid is a dimeric α-helical protein J. Virol. 77 2003 7143 7149
    • (2003) J. Virol. , vol.77 , pp. 7143-7149
    • Jones, C.T.1    Ma, L.2    Kuhn, R.J.3
  • 86
    • 84862908834 scopus 로고    scopus 로고
    • Molecular understanding of receptor-mediated membrane responses to ligand-coated nanoparticles
    • T. Yue, and X. Zhang Molecular understanding of receptor-mediated membrane responses to ligand-coated nanoparticles Soft Matter 7 2011 9104
    • (2011) Soft Matter , vol.7 , pp. 9104
    • Yue, T.1    Zhang, X.2
  • 87
    • 0000801139 scopus 로고    scopus 로고
    • Interaction of conical membrane inclusions: Effect of lateral tension
    • T.R. Weikl, M.M. Kozlov, and W. Helfrich Interaction of conical membrane inclusions: effect of lateral tension Phys. Rev. E. 57 1998 6988 6995
    • (1998) Phys. Rev. E. , vol.57 , pp. 6988-6995
    • Weikl, T.R.1    Kozlov, M.M.2    Helfrich, W.3
  • 88
    • 68949105608 scopus 로고    scopus 로고
    • Membrane-mediated interactions measured using membrane domains
    • S. Semrau, and T. Idema C. Storm Membrane-mediated interactions measured using membrane domains Biophys. J. 96 2009 4906 4915
    • (2009) Biophys. J. , vol.96 , pp. 4906-4915
    • Semrau, S.1    Idema, T.2    Storm, C.3
  • 89
    • 80052543504 scopus 로고    scopus 로고
    • Membrane-mediated interactions between circular particles in the strongly curved regime
    • B.J. Reynwar, and M. Deserno Membrane-mediated interactions between circular particles in the strongly curved regime Soft Matter. 7 2011 8567 8575
    • (2011) Soft Matter. , vol.7 , pp. 8567-8575
    • Reynwar, B.J.1    Deserno, M.2
  • 90
    • 84956088383 scopus 로고
    • Long-range forces in heterogeneous fluid membranes
    • M. Goulian, R. Bruinsma, and P. Pincus Long-range forces in heterogeneous fluid membranes Europhys. Lett. 22 1993 145 150
    • (1993) Europhys. Lett. , vol.22 , pp. 145-150
    • Goulian, M.1    Bruinsma, R.2    Pincus, P.3
  • 91
    • 28444476999 scopus 로고    scopus 로고
    • Membrane curvature and mechanisms of dynamic cell membrane remodeling
    • H.T. McMahon, and J.L. Gallop Membrane curvature and mechanisms of dynamic cell membrane remodeling Nature 438 2005 590 596
    • (2005) Nature , vol.438 , pp. 590-596
    • McMahon, H.T.1    Gallop, J.L.2
  • 93
    • 79956141898 scopus 로고    scopus 로고
    • Subversion of the actin cytoskeleton during viral infection
    • M.P. Taylor, O.O. Koyuncu, and L.W. Enquist Subversion of the actin cytoskeleton during viral infection Nat. Rev. Microbiol. 9 2011 427 439
    • (2011) Nat. Rev. Microbiol. , vol.9 , pp. 427-439
    • Taylor, M.P.1    Koyuncu, O.O.2    Enquist, L.W.3
  • 94
    • 72249095705 scopus 로고    scopus 로고
    • Retroviral assembly and budding occur through an actin-driven mechanism
    • M. Gladnikoff, and E. Shimoni I. Rousso Retroviral assembly and budding occur through an actin-driven mechanism Biophys. J. 97 2009 2419 2428
    • (2009) Biophys. J. , vol.97 , pp. 2419-2428
    • Gladnikoff, M.1    Shimoni, E.2    Rousso, I.3
  • 96
    • 36849103820 scopus 로고
    • Role of repulsive forces in determining the equilibrium structure of simple liquids
    • J.D. Weeks, D. Chandler, and H.C. Andersen Role of repulsive forces in determining the equilibrium structure of simple liquids J. Chem. Phys. 54 1971 5237
    • (1971) J. Chem. Phys. , vol.54 , pp. 5237
    • Weeks, J.D.1    Chandler, D.2    Andersen, H.C.3
  • 97
    • 5544254964 scopus 로고
    • Molecular dynamics simulation for polymers in the presence of a heat bath
    • G.S. Grest, and K. Kremer Molecular dynamics simulation for polymers in the presence of a heat bath Phys. Rev. A 33 1986 3628 3631
    • (1986) Phys. Rev. A , vol.33 , pp. 3628-3631
    • Grest, G.S.1    Kremer, K.2
  • 98
    • 77949269266 scopus 로고    scopus 로고
    • Membrane composition-mediated protein-protein interactions
    • B.J. Reynwar, and M. Deserno Membrane composition-mediated protein-protein interactions Biointerphases 3 2008 FA117
    • (2008) Biointerphases , vol.3 , pp. FA117
    • Reynwar, B.J.1    Deserno, M.2
  • 99
    • 84897850895 scopus 로고    scopus 로고
    • More than the sum of its parts: Coarse-grained peptide-lipid interactions from a simple cross-parametrization
    • T. Bereau, Z.-J. Wang, and M. Deserno More than the sum of its parts: coarse-grained peptide-lipid interactions from a simple cross-parametrization J. Chem. Phys. 140 2014 115101
    • (2014) J. Chem. Phys. , vol.140 , pp. 115101
    • Bereau, T.1    Wang, Z.-J.2    Deserno, M.3


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