-
1
-
-
84975742565
-
A map of human genome variation from population-scale sequencing
-
1000 Genomes Project Consortium Abecasis, G. R., D. Altshuler, A. Auton, L. D. Brooks, R. M. Durbin et al., 2010 A map of human genome variation from population-scale sequencing. Nature 467: 1061-1073.
-
(2010)
Nature
, vol.467
, pp. 1061-1073
-
-
Abecasis, G.R.1
Altshuler, D.2
Auton, A.3
Brooks, L.D.4
Durbin, R.M.5
1000 Genomes Project Consortium6
-
2
-
-
0038444113
-
The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms
-
Akhunov, E. D., A. W. Goodyear, S. Geng, L.-L. Qi, B. Echalier et al., 2003 The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms. Genome Res. 13: 753-763.
-
(2003)
Genome Res
, vol.13
, pp. 753-763
-
-
Akhunov, E.D.1
Goodyear, A.W.2
Geng, S.3
Qi, L.-L.4
Echalier, B.5
-
3
-
-
0242349686
-
High-resolution crossover maps for each bivalent of Zea mays using recombination nodules
-
Anderson, L. K., G. G. Doyle, B. Brigham, J. Carter, K. D. Hooker et al., 2003 High-resolution crossover maps for each bivalent of Zea mays using recombination nodules. Genetics 165: 849- 865.
-
(2003)
Genetics
, vol.165
, pp. 849-865
-
-
Anderson, L.K.1
Doyle, G.G.2
Brigham, B.3
Carter, J.4
Hooker, K.D.5
-
4
-
-
78449299668
-
R/qtl: High-throughput multiple QTL mapping
-
Arends, D., P. Prins, R. C. Jansen, and K. W. Broman, 2010 R/qtl: high-throughput multiple QTL mapping. Bioinformatics 26: 2990-2992.
-
(2010)
Bioinformatics
, vol.26
, pp. 2990-2992
-
-
Arends, D.1
Prins, P.2
Jansen, R.C.3
Broman, K.W.4
-
6
-
-
84859636918
-
A fine-scale chimpanzee genetic map from population sequencing
-
Auton, A., A. Fledel-Alon, S. Pfeifer, O. Venn, L. Ségurel et al., 2012 A fine-scale chimpanzee genetic map from population sequencing. Science 336: 193-198.
-
(2012)
Science
, vol.336
, pp. 193-198
-
-
Auton, A.1
Fledel-Alon, A.2
Pfeifer, S.3
Venn, O.4
Ségurel, L.5
-
7
-
-
0037223888
-
The evolutionary genomics of pathogen recombination
-
Awadalla, P., 2003 The evolutionary genomics of pathogen recombination. Nat. Rev. Genet. 4: 50-60.
-
(2003)
Nat. Rev. Genet
, vol.4
, pp. 50-60
-
-
Awadalla, P.1
-
8
-
-
77950628781
-
The recombination landscape of the zebra finch Taeniopygia guttata genome
-
Backström, N., W. Forstmeier, H. Schielzeth, H. Mellenius, K. Nam et al., 2010 The recombination landscape of the zebra finch Taeniopygia guttata genome. Genome Res. 20: 485-495.
-
(2010)
Genome Res
, vol.20
, pp. 485-495
-
-
Backström, N.1
Forstmeier, W.2
Schielzeth, H.3
Mellenius, H.4
Nam, K.5
-
9
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
Baird, N. A., P. D. Etter, T. S. Atwood, M. C. Currey, A. L. Shiver et al., 2008 Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 3: e3376.
-
(2008)
PLoS One
, vol.3
-
-
Baird, N.A.1
Etter, P.D.2
Atwood, T.S.3
Currey, M.C.4
Shiver, A.L.5
-
10
-
-
0017257301
-
The genetic control of meiosis
-
Baker, B. S., A. T. Carpenter, M. S. Esposito, R. E. Esposito, and L. Sandler, 1976 The genetic control of meiosis. Annu. Rev. Genet. 10: 53-134.
-
(1976)
Annu. Rev. Genet
, vol.10
, pp. 53-134
-
-
Baker, B.S.1
Carpenter, A.T.2
Esposito, M.S.3
Esposito, R.E.4
Sandler, L.5
-
11
-
-
73349090580
-
Diversity and evolution of effector loci in natural populations of the plant pathogen Melampsora lini
-
Barrett, L. G., P. H. Thrall, P. N. Dodds, and C. C. Linde, 2009 Diversity and evolution of effector loci in natural populations of the plant pathogen Melampsora lini. Mol. Biol. Evol. 26: 2499-2513.
-
(2009)
Mol. Biol. Evol
, vol.26
, pp. 2499-2513
-
-
Barrett, L.G.1
Thrall, P.H.2
Dodds, P.N.3
Linde, C.C.4
-
12
-
-
51449114296
-
Meiotic recombination at the ends of chromosomes in Saccharomyces cerevisiae
-
Barton, A. B., M. R. Pekosz, R. S. Kurvathi, and D. B. Kaback, 2008 Meiotic recombination at the ends of chromosomes in Saccharomyces cerevisiae. Genetics 179: 1221-1235.
-
(2008)
Genetics
, vol.179
, pp. 1221-1235
-
-
Barton, A.B.1
Pekosz, M.R.2
Kurvathi, R.S.3
Kaback, D.B.4
-
13
-
-
0026529344
-
Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster
-
Begun, D. J., and C. F. Aquadro, 1992 Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 356: 519-520.
-
(1992)
Nature
, vol.356
, pp. 519-520
-
-
Begun, D.J.1
Aquadro, C.F.2
-
14
-
-
84905049901
-
Trimmomatic: A flexible trimmer for Illumina sequence data
-
Bolger, A. M., M. Lohse, and B. Usadel, 2014 Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30: 2114-2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
15
-
-
84857191279
-
An SNP-based linkage map for zebrafish reveals sex determination loci
-
Bradley, K. M., J. P. Breyer, D. B. Melville, K. W. Broman, E. W. Knapik et al., 2011 An SNP-based linkage map for zebrafish reveals sex determination loci. G3 1: 3-9.
-
(2011)
G3
, vol.1
, pp. 3-9
-
-
Bradley, K.M.1
Breyer, J.P.2
Melville, D.B.3
Broman, K.W.4
Knapik, E.W.5
-
16
-
-
25444478350
-
Meiotic synapsis proceeds from a limited number of subtelomeric sites in the human male
-
Brown, P. W., L. Judis, E. R. Chan, S. Schwartz, A. Seftel et al., 2005 Meiotic synapsis proceeds from a limited number of subtelomeric sites in the human male. Am. J. Hum. Genet. 77: 556-566.
-
(2005)
Am. J. Hum. Genet
, vol.77
, pp. 556-566
-
-
Brown, P.W.1
Judis, L.2
Chan, E.R.3
Schwartz, S.4
Seftel, A.5
-
17
-
-
84877777277
-
Coevolution and life cycle specialization of plant cell wall degrading enzymes in a hemibiotrophic pathogen
-
Brunner, P. C., S. F. F. Torriani, D. Croll, E. H. Stukenbrock, and B. A. McDonald, 2013 Coevolution and life cycle specialization of plant cell wall degrading enzymes in a hemibiotrophic pathogen. Mol. Biol. Evol. 30: 1337-1347.
-
(2013)
Mol. Biol. Evol
, vol.30
, pp. 1337-1347
-
-
Brunner, P.C.1
Torriani, S.F.F.2
Croll, D.3
Stukenbrock, E.H.4
McDonald, B.A.5
-
19
-
-
80053459911
-
A diverse population of Cryptococcus gattii molecular type VGIII in southern Californian HIV/AIDS patients
-
Byrnes, E. J., W. Li, P. Ren, Y. Lewit, K. Voelz et al., 2011 A diverse population of Cryptococcus gattii molecular type VGIII in southern Californian HIV/AIDS patients. PLoS Pathog. 7: e1002205.
-
(2011)
PLoS Pathog
, vol.7
-
-
Byrnes, E.J.1
Li, W.2
Ren, P.3
Lewit, Y.4
Voelz, K.5
-
21
-
-
0030831182
-
Genetic and physical maps of Saccharomyces cerevisiae
-
Cherry, J. M., C. Ball, S. Weng, G. Juvik, R. Schmidt et al., 1997 Genetic and physical maps of Saccharomyces cerevisiae. Nature 387: 67-73.
-
(1997)
Nature
, vol.387
, pp. 67-73
-
-
Cherry, J.M.1
Ball, C.2
Weng, S.3
Juvik, G.4
Schmidt, R.5
-
22
-
-
34047200066
-
Live hot, die young: Transmission distortion in recombination hotspots
-
Coop, G., and S. R. Myers, 2007 Live hot, die young: transmission distortion in recombination hotspots. PLoS Genet. 3: e35.
-
(2007)
PLoS Genet
, vol.3
-
-
Coop, G.1
Myers, S.R.2
-
23
-
-
0036828166
-
Frequency of sexual reproduction by Mycosphaerella graminicola on partially resistant wheat cultivars
-
Cowger, C., B. A. McDonald, and C. C. Mundt, 2002 Frequency of sexual reproduction by Mycosphaerella graminicola on partially resistant wheat cultivars. Phytopathology 92: 1175-1181.
-
(2002)
Phytopathology
, vol.92
, pp. 1175-1181
-
-
Cowger, C.1
McDonald, B.A.2
Mundt, C.C.3
-
24
-
-
47649128449
-
Frequency of sexual recombination by Mycosphaerella graminicola in mild and severe epidemics
-
Cowger, C., P. C. Brunner, and C. C. Mundt, 2008 Frequency of sexual recombination by Mycosphaerella graminicola in mild and severe epidemics. Phytopathology 98: 752-759.
-
(2008)
Phytopathology
, vol.98
, pp. 752-759
-
-
Cowger, C.1
Brunner, P.C.2
Mundt, C.C.3
-
25
-
-
84861196424
-
The accessory genome as a cradle for adaptive evolution in pathogens
-
Croll, D., and B. A. McDonald, 2012 The accessory genome as a cradle for adaptive evolution in pathogens. PLoS Pathog. 8: e1002608.
-
(2012)
PLoS Pathog
, vol.8
-
-
Croll, D.1
McDonald, B.A.2
-
26
-
-
84879670944
-
Breakage-fusionbridge cycles and large insertions contribute to the rapid evolution of accessory chromosomes in a fungal pathogen
-
Croll, D., M. Zala, and B. A. McDonald, 2013 Breakage-fusionbridge cycles and large insertions contribute to the rapid evolution of accessory chromosomes in a fungal pathogen. PLoS Genet. 9: e1003567.
-
(2013)
PLoS Genet
, vol.9
-
-
Croll, D.1
Zala, M.2
McDonald, B.A.3
-
27
-
-
84875230189
-
Genomic signatures of selection at linked sites: Unifying the disparity among species
-
Cutter, A. D., and B. A. Payseur, 2013 Genomic signatures of selection at linked sites: unifying the disparity among species. Nat. Rev. Genet. 14: 262-274.
-
(2013)
Nat. Rev. Genet
, vol.14
, pp. 262-274
-
-
Cutter, A.D.1
Payseur, B.A.2
-
28
-
-
79960405019
-
The variant call format and VCFtools
-
Danecek, P., A. Auton, G. Abecasis, C. A. Albers, E. Banks et al.1000 Genomes Project Analysis Group, 2011 The variant call format and VCFtools. Bioinformatics 27: 2156-2158.
-
(2011)
Bioinformatics
, vol.27
, pp. 2156-2158
-
-
Danecek, P.1
Auton, A.2
Abecasis, G.3
Albers, C.A.4
Banks, E.5
-
29
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo, M. A., E. Banks, R. Poplin, K. V. Garimella, J. R. Maguire et al., 2011 A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet. 43: 491-498.
-
(2011)
Nat. Genet
, vol.43
, pp. 491-498
-
-
DePristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
-
30
-
-
33846032295
-
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?
-
Didelot, X., M. Achtman, J. Parkhill, N. R. Thomson, and D. Falush, 2007 A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination? Genome Res. 17: 61-68.
-
(2007)
Genome Res
, vol.17
, pp. 61-68
-
-
Didelot, X.1
Achtman, M.2
Parkhill, J.3
Thomson, N.R.4
Falush, D.5
-
31
-
-
30044442013
-
Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots."
-
Drouaud, J., 2005 Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots." Genome Res. 16: 106-114.
-
(2005)
Genome Res
, vol.16
, pp. 106-114
-
-
Drouaud, J.1
-
32
-
-
44949198268
-
The impact of recombination on nucleotide substitutions in the human genome
-
Duret, L., and P. F. Arndt, 2008 The impact of recombination on nucleotide substitutions in the human genome. PLoS Genet. 4: e1000071.
-
(2008)
PLoS Genet
, vol.4
-
-
Duret, L.1
Arndt, P.F.2
-
33
-
-
70350236484
-
Biased gene conversion and the evolution of mammalian genomic landscapes
-
Duret, L., and N. Galtier, 2009 Biased gene conversion and the evolution of mammalian genomic landscapes. Annu Rev Genom Hum G 10: 285-311.
-
(2009)
Annu Rev Genom Hum G
, vol.10
, pp. 285-311
-
-
Duret, L.1
Galtier, N.2
-
34
-
-
84857207047
-
SNP discovery and genotyping for evolutionary genetics using RAD sequencing
-
Etter, P. D., S. Bassham, P. A. Hohenlohe, E. A. Johnson, and W. A. Cresko, 2011 SNP discovery and genotyping for evolutionary genetics using RAD sequencing. Methods Mol. Biol. 772: 157- 178.
-
(2011)
Methods Mol. Biol
, vol.772
, pp. 157-178
-
-
Etter, P.D.1
Bassham, S.2
Hohenlohe, P.A.3
Johnson, E.A.4
Cresko, W.A.5
-
35
-
-
81755187011
-
Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage
-
Farrer, R. A., L. A. Weinert, J. Bielby, T. W. J. Garner, F. Balloux et al., 2011 Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage. Proc. Natl. Acad. Sci. USA 108: 18732- 18736.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 18732-18736
-
-
Farrer, R.A.1
Weinert, L.A.2
Bielby, J.3
Garner, T.W.J.4
Balloux, F.5
-
36
-
-
70349534372
-
Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host
-
Fisher, M. C., T. W. J. Garner, and S. F. Walker, 2009 Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host. Annu. Rev. Microbiol. 63: 291-310.
-
(2009)
Annu. Rev. Microbiol
, vol.63
, pp. 291-310
-
-
Fisher, M.C.1
Garner, T.W.J.2
Walker, S.F.3
-
37
-
-
27644483074
-
Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak
-
Fraser, J. A., S. S. Giles, E. C. Wenink, S. G. Geunes-Boyer, J. R. Wright et al., 2005 Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak. Nature 437: 1360-1364.
-
(2005)
Nature
, vol.437
, pp. 1360-1364
-
-
Fraser, J.A.1
Giles, S.S.2
Wenink, E.C.3
Geunes-Boyer, S.G.4
Wright, J.R.5
-
38
-
-
0034633494
-
Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae
-
Gerton, J. L., J. DeRisi, R. Shroff, M. Lichten, P. O. Brown et al., 2000 Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 97: 11383-11390.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 11383-11390
-
-
Gerton, J.L.1
DeRisi, J.2
Shroff, R.3
Lichten, M.4
Brown, P.O.5
-
39
-
-
79959834134
-
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis
-
Goodwin, S. B., S. Ben M'Barek, A. H. J. Wittenberg, C. F. Crane, J. K. Hane et al., 2011 Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. PLoS Genet. 7: e1002070.
-
(2011)
PLoS Genet
, vol.7
-
-
Goodwin, S.B.1
Ben M'Barek, S.2
Wittenberg, A.H.J.3
Crane, C.F.4
Hane, J.K.5
-
40
-
-
0035812705
-
Success and virulence in Toxoplasma as the result of sexual recombination between two distinct ancestries
-
Grigg, M. E., S. Bonnefoy, A. B. Hehl, Y. Suzuki, and J. C. Boothroyd, 2001 Success and virulence in Toxoplasma as the result of sexual recombination between two distinct ancestries. Science 294: 161-165.
-
(2001)
Science
, vol.294
, pp. 161-165
-
-
Grigg, M.E.1
Bonnefoy, S.2
Hehl, A.B.3
Suzuki, Y.4
Boothroyd, J.C.5
-
41
-
-
0000774060
-
Sex vs. non-sex vs. parasite
-
Hamilton, W. D., 1980 Sex vs. non-sex vs. parasite. Oikos 35: 282-290.
-
(1980)
Oikos
, vol.35
, pp. 282-290
-
-
Hamilton, W.D.1
-
42
-
-
0035319804
-
To err (meiotically) is human: The genesis of human aneuploidy
-
Hassold, T., and P. Hunt, 2001 To err (meiotically) is human: the genesis of human aneuploidy. Nat. Rev. Genet. 2: 280-291.
-
(2001)
Nat. Rev. Genet
, vol.2
, pp. 280-291
-
-
Hassold, T.1
Hunt, P.2
-
43
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
-
Heinz, S., C. Benner, N. Spann, E. Bertolino, Y. C. Lin et al., 2010 Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell 38: 576-589.
-
(2010)
Mol. Cell
, vol.38
, pp. 576-589
-
-
Heinz, S.1
Benner, C.2
Spann, N.3
Bertolino, E.4
Lin, Y.C.5
-
44
-
-
0013979181
-
The effect of linkage on limits to artificial selection
-
Hill, W. G., and A. Robertson, 1966 The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
-
(1966)
Genet. Res
, vol.8
, pp. 269-294
-
-
Hill, W.G.1
Robertson, A.2
-
45
-
-
48349124258
-
High-throughput sequencing provides insights into genome variation and evolution in Salmonella typhi
-
Holt, K. E., J. Parkhill, C. J. Mazzoni, P. Roumagnac, F.-X. Weill et al., 2008 High-throughput sequencing provides insights into genome variation and evolution in Salmonella typhi. Nat. Genet. 40: 987-993.
-
(2008)
Nat. Genet
, vol.40
, pp. 987-993
-
-
Holt, K.E.1
Parkhill, J.2
Mazzoni, C.J.3
Roumagnac, P.4
Weill, F.-X.5
-
46
-
-
28044436941
-
How homologous recombination generates a mutable genome
-
Hurles, M., 2005 How homologous recombination generates a mutable genome. Hum. Genomics 2: 179-186.
-
(2005)
Hum. Genomics
, vol.2
, pp. 179-186
-
-
Hurles, M.1
-
47
-
-
1842717957
-
Comparative recombination rates in the rat, mouse, and human genomes
-
Jensen-Seaman, M. I., T. S. Furey, B. A. Payseur, Y. Lu, K. M. Roskin et al., 2004 Comparative recombination rates in the rat, mouse, and human genomes. Genome Res. 14: 528-538.
-
(2004)
Genome Res
, vol.14
, pp. 528-538
-
-
Jensen-Seaman, M.I.1
Furey, T.S.2
Payseur, B.A.3
Lu, Y.4
Roskin, K.M.5
-
48
-
-
79953261109
-
High recombination rates and hotspots in a Plasmodium falciparum genetic cross
-
Jiang, H., N. Li, V. Gopalan, M. M. Zilversmit, S. Varma et al., 2011 High recombination rates and hotspots in a Plasmodium falciparum genetic cross. Genome Biol. 12: R33.
-
(2011)
Genome Biol
, vol.12
-
-
Jiang, H.1
Li, N.2
Gopalan, V.3
Zilversmit, M.M.4
Varma, S.5
-
49
-
-
0344466795
-
Chromosome size-dependent control of meiotic reciprocal recombination in Saccharomyces cerevisiae: The role of crossover interference
-
Kaback, D. B., D. Barber, J. Mahon, J. Lamb, and J. You, 1999 Chromosome size-dependent control of meiotic reciprocal recombination in Saccharomyces cerevisiae: the role of crossover interference. Genetics 152: 1475-1486.
-
(1999)
Genetics
, vol.152
, pp. 1475-1486
-
-
Kaback, D.B.1
Barber, D.2
Mahon, J.3
Lamb, J.4
You, J.5
-
50
-
-
84893420263
-
Genomic variability as a driver of plant-pathogen coevolution?
-
Karasov, T. L., M. W. Horton, and J. Bergelson, 2014 Genomic variability as a driver of plant-pathogen coevolution? Curr. Opin. Plant Biol. 18C: 24-30.
-
(2014)
Curr. Opin. Plant Biol
, vol.18 C
, pp. 24-30
-
-
Karasov, T.L.1
Horton, M.W.2
Bergelson, J.3
-
51
-
-
0029789635
-
Successful crosses and molecular tetrad and progeny analyses demonstrate heterothallism in Mycosphaerella graminicola
-
Kema, G. H. J., E. C. P. Verstappen, M. Todorova, and C. Waalwijk, 1996 Successful crosses and molecular tetrad and progeny analyses demonstrate heterothallism in Mycosphaerella graminicola. Curr. Genet. 30: 251-258.
-
(1996)
Curr. Genet
, vol.30
, pp. 251-258
-
-
Kema, G.H.J.1
Verstappen, E.C.P.2
Todorova, M.3
Waalwijk, C.4
-
52
-
-
0036672060
-
A combined amplified fragment length polymorphism and randomly amplified polymorphism DNA genetic linkage map of Mycosphaerella graminicola, the septoria tritici leaf blotch pathogen of wheat
-
Kema, G. H. J., S. B. Goodwin, S. Hamza, E. C. P. Verstappen, J. R. Cavaletto et al., 2002 A combined amplified fragment length polymorphism and randomly amplified polymorphism DNA genetic linkage map of Mycosphaerella graminicola, the septoria tritici leaf blotch pathogen of wheat. Genetics 161: 1497-1505.
-
(2002)
Genetics
, vol.161
, pp. 1497-1505
-
-
Kema, G.H.J.1
Goodwin, S.B.2
Hamza, S.3
Verstappen, E.C.P.4
Cavaletto, J.R.5
-
53
-
-
18544381909
-
A high-resolution recombination map of the human genome
-
Kong, A., D. F. Gudbjartsson, J. Sainz, G. M. Jonsdottir, S. A. Gudjonsson et al., 2002 A high-resolution recombination map of the human genome. Nat. Genet. 31: 241-247.
-
(2002)
Nat. Genet
, vol.31
, pp. 241-247
-
-
Kong, A.1
Gudbjartsson, D.F.2
Sainz, J.3
Jonsdottir, G.M.4
Gudjonsson, S.A.5
-
54
-
-
62449226213
-
A high-density single nucleotide polymorphism map for Neurospora crassa
-
Lambreghts, R., M. Shi, W. J. Belden, D. Decaprio, D. Park et al., 2009 A high-density single nucleotide polymorphism map for Neurospora crassa. Genetics 181: 767-781.
-
(2009)
Genetics
, vol.181
, pp. 767-781
-
-
Lambreghts, R.1
Shi, M.2
Belden, W.J.3
Decaprio, D.4
Park, D.5
-
55
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead, B., and S. L. Salzberg, 2012 Fast gapped-read alignment with Bowtie 2. Nat. Methods 9: 357-359.
-
(2012)
Nat. Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
56
-
-
0026563916
-
Systematic detection of errors in genetic linkage data
-
Lincoln, S. E., and E. S. Lander, 1992 Systematic detection of errors in genetic linkage data. Genomics 14: 604-610.
-
(1992)
Genomics
, vol.14
, pp. 604-610
-
-
Lincoln, S.E.1
Lander, E.S.2
-
57
-
-
77952008500
-
A review of red queen models for the persistence of obligate sexual reproduction
-
Lively, C. M., 2010 A review of red queen models for the persistence of obligate sexual reproduction. J. Hered. 101: S13-S20.
-
(2010)
J. Hered
, vol.101
, pp. S13-S20
-
-
Lively, C.M.1
-
58
-
-
47949108144
-
High-resolution mapping of meiotic crossovers and noncrossovers in yeast
-
Mancera, E., R. Bourgon, A. Brozzi, W. Huber, and L. M. Steinmetz, 2008 High-resolution mapping of meiotic crossovers and noncrossovers in yeast. Nature 454: 479-485.
-
(2008)
Nature
, vol.454
, pp. 479-485
-
-
Mancera, E.1
Bourgon, R.2
Brozzi, A.3
Huber, W.4
Steinmetz, L.M.5
-
59
-
-
0000201616
-
Crossing-over
-
Mather, K., 1938 Crossing-over. Biol. Rev. 13: 252-292.
-
(1938)
Biol. Rev
, vol.13
, pp. 252-292
-
-
Mather, K.1
-
60
-
-
0036028757
-
Pathogen population genetics, evolutionary potential, and durable resistance
-
McDonald, B. A., and C. Linde, 2002 Pathogen population genetics, evolutionary potential, and durable resistance. Annu. Rev. Phytopathol. 40: 349-379.
-
(2002)
Annu. Rev. Phytopathol
, vol.40
, pp. 349-379
-
-
McDonald, B.A.1
Linde, C.2
-
61
-
-
41949136199
-
The mating-type chromosome in the filamentous ascomycete Neurospora tetrasperma represents a model for early evolution of sex chromosomes
-
Menkis, A., D. J. Jacobson, T. Gustafsson, and H. Johannesson, 2008 The mating-type chromosome in the filamentous ascomycete Neurospora tetrasperma represents a model for early evolution of sex chromosomes. PLoS Genet. 4: e1000030.
-
(2008)
PLoS Genet
, vol.4
-
-
Menkis, A.1
Jacobson, D.J.2
Gustafsson, T.3
Johannesson, H.4
-
62
-
-
84897510157
-
Molecular characterization and functional analyses of ZtWor1, a transcriptional regulator of the fungal wheat pathogen Zymoseptoria tritici
-
Mirzadi Gohari, A., R. Mehrabi, O. Robert, I. A. Ince, S. Boeren et al., 2014 Molecular characterization and functional analyses of ZtWor1, a transcriptional regulator of the fungal wheat pathogen Zymoseptoria tritici. Mol. Plant Pathol. 15: 394-405.
-
(2014)
Mol. Plant Pathol
, vol.15
, pp. 394-405
-
-
Mirzadi Gohari, A.1
Mehrabi, R.2
Robert, O.3
Ince, I.A.4
Boeren, S.5
-
63
-
-
84870925064
-
Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola
-
Morais do Amaral, A., J. Antoniw, J. J. Rudd, and K. E. Hammond- Kosack, 2012 Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola. PLoS One 7: e49904.
-
(2012)
PLoS One
, vol.7
-
-
Morais do Amaral, A.1
Antoniw, J.2
Rudd, J.J.3
Hammond-Kosack, K.E.4
-
64
-
-
79960099104
-
Running with the red queen: Host-parasite coevolution selects for biparental sex
-
Morran, L. T., O. G. Schmidt, I. A. Gelarden, R. C. Parrish, and C. M. Lively, 2011 Running with the red queen: host-parasite coevolution selects for biparental sex. Science 333: 216-218.
-
(2011)
Science
, vol.333
, pp. 216-218
-
-
Morran, L.T.1
Schmidt, O.G.2
Gelarden, I.A.3
Parrish, R.C.4
Lively, C.M.5
-
65
-
-
0024725347
-
Genetic map of Saccharomyces cerevisiae, edition 10
-
Mortimer, R. K., D. Schild, C. R. Contopoulou, and J. A. Kans, 1989 Genetic map of Saccharomyces cerevisiae, edition 10. Yeast 5: 321-403.
-
(1989)
Yeast
, vol.5
, pp. 321-403
-
-
Mortimer, R.K.1
Schild, D.2
Contopoulou, C.R.3
Kans, J.A.4
-
66
-
-
80052142011
-
GC-biased gene conversion and selection affect GC content in the Oryza genus (rice)
-
Muyle, A., L. Serres-Giardi, A. Ressayre, J. Escobar, and S. Glémin, 2011 GC-biased gene conversion and selection affect GC content in the Oryza genus (rice). Mol. Biol. Evol. 28: 2695-2706.
-
(2011)
Mol. Biol. Evol
, vol.28
, pp. 2695-2706
-
-
Muyle, A.1
Serres-Giardi, L.2
Ressayre, A.3
Escobar, J.4
Glémin, S.5
-
67
-
-
26844482093
-
A fine-scale map of recombination rates and hotspots across the human genome
-
Myers, S., L. Bottolo, C. Freeman, G. McVean, and P. Donnelly, 2005 A fine-scale map of recombination rates and hotspots across the human genome. Science 310: 321-324.
-
(2005)
Science
, vol.310
, pp. 321-324
-
-
Myers, S.1
Bottolo, L.2
Freeman, C.3
McVean, G.4
Donnelly, P.5
-
68
-
-
50449088155
-
A common sequence motif associated with recombination hot spots and genome instability in humans
-
Myers, S., C. Freeman, A. Auton, P. Donnelly, and G. McVean, 2008 A common sequence motif associated with recombination hot spots and genome instability in humans. Nat. Genet. 40: 1124-1129.
-
(2008)
Nat. Genet
, vol.40
, pp. 1124-1129
-
-
Myers, S.1
Freeman, C.2
Auton, A.3
Donnelly, P.4
McVean, G.5
-
69
-
-
0036889393
-
Variation in recombination rate across the genome: Evidence and implications
-
Nachman, M. W., 2002 Variation in recombination rate across the genome: evidence and implications. Curr. Opin. Genet. Dev. 12: 657-663.
-
(2002)
Curr. Opin. Genet. Dev
, vol.12
, pp. 657-663
-
-
Nachman, M.W.1
-
70
-
-
44349193477
-
Nuclear architecture and chromosome dynamics in the search of the pairing partner in meiosis in plants
-
Naranjo, T., and E. Corredor, 2008 Nuclear architecture and chromosome dynamics in the search of the pairing partner in meiosis in plants. Cytogenet. Genome Res. 120: 320-330.
-
(2008)
Cytogenet. Genome Res
, vol.120
, pp. 320-330
-
-
Naranjo, T.1
Corredor, E.2
-
71
-
-
33847044691
-
The evolution of epidemic influenza
-
Nelson, M. I., and E. C. Holmes, 2007 The evolution of epidemic influenza. Nat. Rev. Genet. 8: 196-205.
-
(2007)
Nat. Rev. Genet
, vol.8
, pp. 196-205
-
-
Nelson, M.I.1
Holmes, E.C.2
-
72
-
-
84906943562
-
The wheat-Septoria conflict: A new front opening up?
-
O'Driscoll, A., S. Kildea, F. Doohan, and J. Spink, 2014 The wheat-Septoria conflict: a new front opening up? Trends Plant Sci. 19: 602-610.
-
(2014)
Trends Plant Sci
, vol.19
, pp. 602-610
-
-
O'Driscoll, A.1
Kildea, S.2
Doohan, F.3
Spink, J.4
-
73
-
-
0030871021
-
The evolution of recombination: Removing the limits to natural selection
-
Otto, S. P., and N. H. Barton, 1997 The evolution of recombination: removing the limits to natural selection. Genetics 147: 879-906.
-
(1997)
Genetics
, vol.147
, pp. 879-906
-
-
Otto, S.P.1
Barton, N.H.2
-
74
-
-
0036209507
-
Resolving the paradox of sex and recombination
-
Otto, S. P., and T. Lenormand, 2002 Resolving the paradox of sex and recombination. Nat. Rev. Genet. 3: 252-261.
-
(2002)
Nat. Rev. Genet
, vol.3
, pp. 252-261
-
-
Otto, S.P.1
Lenormand, T.2
-
75
-
-
84895476812
-
How do filamentous pathogens deliver effector proteins into plant cells?
-
Petre, B., and S. Kamoun, 2014 How do filamentous pathogens deliver effector proteins into plant cells? PLoS Biol. 12: e1001801.
-
(2014)
PLoS Biol
, vol.12
-
-
Petre, B.1
Kamoun, S.2
-
76
-
-
84861182813
-
Genome evolution in filamentous plant pathogens: Why bigger can be better
-
Raffaele, S., and S. Kamoun, 2012 Genome evolution in filamentous plant pathogens: why bigger can be better. Nat. Rev. Microbiol. 10: 417-430.
-
(2012)
Nat. Rev. Microbiol
, vol.10
, pp. 417-430
-
-
Raffaele, S.1
Kamoun, S.2
-
77
-
-
78650149135
-
Genome evolution following host jumps in the Irish potato famine pathogen lineage
-
Raffaele, S., R. A. Farrer, L. M. Cano, D. J. Studholme, D. MacLean et al., 2010 Genome evolution following host jumps in the Irish potato famine pathogen lineage. Science 330: 1540-1543.
-
(2010)
Science
, vol.330
, pp. 1540-1543
-
-
Raffaele, S.1
Farrer, R.A.2
Cano, L.M.3
Studholme, D.J.4
MacLean, D.5
-
78
-
-
84878444624
-
Recombination in the threespine stickleback genome: Patterns and consequences
-
Roesti, M., D. Moser, and D. Berner, 2013 Recombination in the threespine stickleback genome: patterns and consequences. Mol. Ecol. 22: 3014-3027.
-
(2013)
Mol. Ecol
, vol.22
, pp. 3014-3027
-
-
Roesti, M.1
Moser, D.2
Berner, D.3
-
79
-
-
55949129165
-
Global gene expression profiles for life stages of the deadly amphibian pathogen Batrachochytrium dendrobatidis
-
Rosenblum, E. B., J. E. Stajich, N. Maddox, and M. B. Eisen, 2008 Global gene expression profiles for life stages of the deadly amphibian pathogen Batrachochytrium dendrobatidis. Proc. Natl. Acad. Sci. USA 105: 17034-17039.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 17034-17039
-
-
Rosenblum, E.B.1
Stajich, J.E.2
Maddox, N.3
Eisen, M.B.4
-
80
-
-
77955350734
-
Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)
-
Stajich, J. E., S. K. Wilke, D. Ahrén, C. H. Au, B. W. Birren et al., 2010 Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Proc. Natl. Acad. Sci. USA 107: 11889-11894.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 11889-11894
-
-
Stajich, J.E.1
Wilke, S.K.2
Ahrén, D.3
Au, C.H.4
Birren, B.W.5
-
81
-
-
26444507920
-
Natural meiotic recombination hot spots in the Schizosaccharomyces pombe genome successfully predicted from the simple sequence motif M26
-
Steiner, W. W., and G. R. Smith, 2005 Natural meiotic recombination hot spots in the Schizosaccharomyces pombe genome successfully predicted from the simple sequence motif M26. Mol. Cell. Biol. 25: 9054-9062.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 9054-9062
-
-
Steiner, W.W.1
Smith, G.R.2
-
82
-
-
51849086869
-
The origins of plant pathogens in agro-ecosystems
-
Stukenbrock, E. H., and B. A. McDonald, 2008 The origins of plant pathogens in agro-ecosystems. Annu. Rev. Phytopathol. 46: 75-100.
-
(2008)
Annu. Rev. Phytopathol
, vol.46
, pp. 75-100
-
-
Stukenbrock, E.H.1
McDonald, B.A.2
-
83
-
-
84859423134
-
Rapid genetic change underpins antagonistic coevolution in a natural host-pathogen metapopulation
-
Thrall, P. H., A.-L. Laine, M. Ravensdale, A. Nemri, P. N. Dodds et al., 2012 Rapid genetic change underpins antagonistic coevolution in a natural host-pathogen metapopulation. Ecol. Lett. 15: 425-435.
-
(2012)
Ecol. Lett
, vol.15
, pp. 425-435
-
-
Thrall, P.H.1
Laine, A.-L.2
Ravensdale, M.3
Nemri, A.4
Dodds, P.N.5
-
84
-
-
60249100256
-
QoI resistance emerged independently at least 4 times in European populations of Mycosphaerella graminicola
-
Torriani, S. F., P. C. Brunner, B. A. McDonald, and H. Sierotzki, 2009 QoI resistance emerged independently at least 4 times in European populations of Mycosphaerella graminicola. Pest Manag. Sci. 65: 155-162.
-
(2009)
Pest Manag. Sci
, vol.65
, pp. 155-162
-
-
Torriani, S.F.1
Brunner, P.C.2
McDonald, B.A.3
Sierotzki, H.4
-
85
-
-
82955233922
-
Evidence for extensive recent intron transposition in closely related fungi
-
Torriani, S. F. F., E. H. Stukenbrock, P. C. Brunner, B. A. McDonald, and D. Croll, 2011 Evidence for extensive recent intron transposition in closely related fungi. Curr. Biol. 21: 2017-2022.
-
(2011)
Curr. Biol
, vol.21
, pp. 2017-2022
-
-
Torriani, S.F.F.1
Stukenbrock, E.H.2
Brunner, P.C.3
McDonald, B.A.4
Croll, D.5
-
87
-
-
84857441787
-
Direct and indirect consequences of meiotic recombination: Implications for genome evolution
-
Webster, M. T., and L. D. Hurst, 2012 Direct and indirect consequences of meiotic recombination: implications for genome evolution. Trends Genet. 28: 101-109.
-
(2012)
Trends Genet
, vol.28
, pp. 101-109
-
-
Webster, M.T.1
Hurst, L.D.2
-
88
-
-
78650701465
-
Self-mating in the definitive host potentiates clonal outbreaks of the apicomplexan parasites Sarcocystis neurona and Toxoplasma gondii
-
Wendte, J. M., M. A. Miller, D. M. Lambourn, S. L. Magargal, D. A. Jessup et al., 2010 Self-mating in the definitive host potentiates clonal outbreaks of the apicomplexan parasites Sarcocystis neurona and Toxoplasma gondii. PLoS Genet. 6: e1001261.
-
(2010)
PLoS Genet
, vol.6
-
-
Wendte, J.M.1
Miller, M.A.2
Lambourn, D.M.3
Magargal, S.L.4
Jessup, D.A.5
-
90
-
-
67649200210
-
Meiosis drives extraordinary genome plasticity in the haploid fungal plant pathogen Mycosphaerella graminicola
-
Wittenberg, A. H. J., T. A. J. van der Lee, S. Ben M'Barek, S. B. Ware, S. B. Goodwin et al., 2009 Meiosis drives extraordinary genome plasticity in the haploid fungal plant pathogen Mycosphaerella graminicola. PLoS One 4: e5863.
-
(2009)
PLoS One
, vol.4
-
-
Wittenberg, A.H.J.1
van der Lee, T.A.J.2
Ben M'Barek, S.3
Ware, S.B.4
Goodwin, S.B.5
-
91
-
-
0028901972
-
Factors that affect the location and frequency of meiosis-induced double-strand breaks in Saccharomyces cerevisiae
-
Wu, T. C., and M. Lichten, 1995 Factors that affect the location and frequency of meiosis-induced double-strand breaks in Saccharomyces cerevisiae. Genetics 140: 55-66.
-
(1995)
Genetics
, vol.140
, pp. 55-66
-
-
Wu, T.C.1
Lichten, M.2
-
92
-
-
0036310724
-
Distribution of mating type alleles in the wheat pathogen Mycosphaerella graminicola over spatial scales from lesions to continents
-
Zhan, J., G. Kema, C. Waalwijk, and B. A. McDonald, 2002 Distribution of mating type alleles in the wheat pathogen Mycosphaerella graminicola over spatial scales from lesions to continents. Fungal Genet. Biol. 36: 128-136.
-
(2002)
Fungal Genet. Biol
, vol.36
, pp. 128-136
-
-
Zhan, J.1
Kema, G.2
Waalwijk, C.3
McDonald, B.A.4
-
93
-
-
24944527490
-
Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola
-
Zhan, J., C. C. Linde, T. Jürgens, U. Merz, F. Steinebrunner et al., 2005 Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola. Mol. Ecol. 14: 2683-2693.
-
(2005)
Mol. Ecol
, vol.14
, pp. 2683-2693
-
-
Zhan, J.1
Linde, C.C.2
Jürgens, T.3
Merz, U.4
Steinebrunner, F.5
-
94
-
-
34249948906
-
Sexual reproduction facilitates the adaptation of parasites to antagonistic host environments: Evidence from empirical study in the wheat- Mycosphaerella graminicola system
-
Zhan, J., C. C. Mundt, and B. A. McDonald, 2007 Sexual reproduction facilitates the adaptation of parasites to antagonistic host environments: evidence from empirical study in the wheat- Mycosphaerella graminicola system. Int. J. Parasitol. 37: 861-870.
-
(2007)
Int. J. Parasitol
, vol.37
, pp. 861-870
-
-
Zhan, J.1
Mundt, C.C.2
McDonald, B.A.3
|