New primers for detecting and quantifying denitrifying anaerobic methane oxidation archaea in different ecological niches

Applied Microbiology and Biotechnology

Volumn 99, Issue 22, 2015, Pages 9805-9812

  Ding, Jing ^a   Ding, Zhao Wei ^b   Fu, Liang ^b   Lu, Yong Ze ^b   Cheng, Shuk H ^a,c   Zeng, Raymond J ^a,b  

^a University of Science and Technology of China   (China)

^b UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA   (China)

^c CITY UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

ANME 2d; DAMO; Environmental samples; New primer design; Phylogenetic analysis; Real time PCR

Indexed keywords

METHANE; NUCLEIC ACIDS;

DAMO; ENVIRONMENTAL SAMPLE; PHYLOGENETIC ANALYSIS; PRIMER DESIGN; REAL-TIME PCR;

POLYMERASE CHAIN REACTION;

METHANE; PRIMER DNA; RIVER WATER; RNA 16S; ARCHAEAL DNA; RIBOSOME DNA;

ANOXIC CONDITIONS; DENITRIFICATION; ENVIRONMENTAL FATE; GENETIC MARKER; METHANE; NICHE; OXIDATION; PHYLOGENETICS; POLYMERASE CHAIN REACTION; PROKARYOTE; RICE; RIVER POLLUTION;

ARTICLE; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CLINICAL EVALUATION; CONTROLLED STUDY; DENITRIFYING ANAEROBIC METHANE OXIDATION; DENITRIFYING ARCHAEON; DNA EXTRACTION; ECOLOGICAL NICHE; ENRICHMENT CULTURE; ENVIRONMENTAL IMPACT; LIMIT OF QUANTITATION; MICROBIAL DIVERSITY; MOLECULAR PHYLOGENY; NONHUMAN; PHYLOGENETIC TREE; REAL TIME POLYMERASE CHAIN REACTION; WATER POLLUTION; ANAEROBIC GROWTH; ARCHAEON; CHEMISTRY; CLASSIFICATION; EVALUATION STUDY; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; OXIDATION REDUCTION REACTION; POLYMERASE CHAIN REACTION; PROCEDURES; SENSITIVITY AND SPECIFICITY;

ANAEROBIOSIS; ARCHAEA; DNA PRIMERS; DNA, ARCHAEAL; DNA, RIBOSOMAL; METHANE; OXIDATION-REDUCTION; POLYMERASE CHAIN REACTION; REAL-TIME POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S; SENSITIVITY AND SPECIFICITY; WATER MICROBIOLOGY;

EID: 84946486211     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-015-6893-6     Document Type: Article

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