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Volumn 5, Issue , 2015, Pages

Annual periodicity in planktonic bacterial and archaeal community composition of eutrophic Lake Taihu

Author keywords

[No Author keywords available]

Indexed keywords

ARCHAEON; CLUSTER ANALYSIS; CYTOLOGY; LAKE; PLANKTON;

EID: 84946010395     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep15488     Document Type: Article
Times cited : (74)

References (86)
  • 1
    • 84876931018 scopus 로고    scopus 로고
    • Harmful cyanobacterial blooms: Causes, consequences, and controls
    • Paerl, H. W. & Otten, T. G. Harmful cyanobacterial blooms: causes, consequences, and controls. Microb Ecol 65, 995-1010, doi: 10.1007/s00248-012-0159-y (2013
    • (2013) Microb Ecol , vol.65 , pp. 995-1010
    • Paerl, H.W.1    Otten, T.G.2
  • 2
    • 84922058368 scopus 로고    scopus 로고
    • Mitigating harmful cyanobacterial blooms in a human-And climatically-impacted world
    • Paerl, H. W. Mitigating harmful cyanobacterial blooms in a human-And climatically-impacted world. Life (Basel) 4, 988-1012, doi: 10.3390/life4040988 (2014
    • (2014) Life (Basel) , vol.4 , pp. 988-1012
    • Paerl, H.W.1
  • 3
    • 84855486166 scopus 로고    scopus 로고
    • Basin-scale control on the phytoplankton biomass in lake Victoria
    • Cozar, A. et al. Basin-scale control on the phytoplankton biomass in Lake Victoria, Africa. PLoS One 7, e29962, doi: 10.1371/journal.pone.0029962 (2012
    • (2012) Africa. PLoS One , vol.7 , pp. e29962
    • Cozar, A.1
  • 4
    • 84864762325 scopus 로고    scopus 로고
    • Interannual variability of cyanobacterial blooms in lake erie
    • Stumpf, R. P., Wynne, T. T., Baker, D. B. & Fahnenstiel, G. L. Interannual variability of cyanobacterial blooms in Lake Erie. PLoS One 7, e42444, doi: 10.1371/journal.pone.0042444 (2012
    • (2012) PLoS One , vol.7 , pp. e42444
    • Stumpf, R.P.1    Wynne, T.T.2    Baker, D.B.3    Fahnenstiel, G.L.4
  • 5
    • 84920084257 scopus 로고    scopus 로고
    • Distribution and incidence of algal blooms in lake taihu
    • Duan, H. et al. Distribution and incidence of algal blooms in Lake Taihu. Aquatic Sciences. 1-8, doi: 10.1007/s00027-014-0367-2 (2014
    • (2014) Aquatic Sciences , pp. 1-8
    • Duan, H.1
  • 6
    • 2542629061 scopus 로고    scopus 로고
    • Do cyanobacteria dominate in eutrophic lakes because they fix atmospheric nitrogen?
    • Ferber, L. R., Levine, S. N., Lini, A. & Livingston, G. P. Do cyanobacteria dominate in eutrophic lakes because they fix atmospheric nitrogen? Freshwater Biology 49, 690-708, doi: 10.1111/j.1365-2427.2004.01218.x (2004
    • (2004) Freshwater Biology , vol.49 , pp. 690-708
    • Ferber, L.R.1    Levine, S.N.2    Lini, A.3    Livingston, G.P.4
  • 7
    • 60749088668 scopus 로고    scopus 로고
    • Ecology controlling eutrophication: Nitrogen and phosphorus
    • Conley, D. J. et al. ECOLOGY Controlling Eutrophication: Nitrogen and Phosphorus. Science 323, 1014-1015, doi: 10.1126/science.1167755 (2009
    • (2009) Science , vol.323 , pp. 1014-1015
    • Conley, D.J.1
  • 9
    • 27444448209 scopus 로고    scopus 로고
    • The formation and degradation of cyanobacterium aphanizomenon flos-Aquae blooms: The importance of ph, water temperature, and day length
    • Yamamoto, Y. & Nakahara, H. The formation and degradation of cyanobacterium Aphanizomenon flos-Aquae blooms: the importance of pH, water temperature, and day length. Limnology 6, 1-6, doi: 10.1007/s10201-004-0138-1 (2005
    • (2005) Limnology , vol.6 , pp. 1-6
    • Yamamoto, Y.1    Nakahara, H.2
  • 10
    • 16244365570 scopus 로고    scopus 로고
    • Hypothesis on cyanobacteria bloom-forming mechanism in large shallow eutrophic lake
    • Kong, F. X. & Gao, G. Hypothesis on cyanobacteria bloom-forming mechanism in large shallow eutrophic lake. Acta Ecologica Sinica 25(3), 589-595 (2005
    • (2005) Acta Ecologica Sinica , vol.25 , Issue.3 , pp. 589-595
    • Kong, F.X.1    Gao, G.2
  • 11
    • 65649084531 scopus 로고    scopus 로고
    • The effects of temperature and nutrients on the growth and dynamics of toxic and non-toxic strains of microcystis during cyanobacteria blooms
    • Davis, T. W., Berry, D. L., Boyer, G. L. & Gobler, C. J. The effects of temperature and nutrients on the growth and dynamics of toxic and non-toxic strains of Microcystis during cyanobacteria blooms. Harmful Algae 8, 715-725, doi: 10.1016/j.hal.2009.02.004 (2009
    • (2009) Harmful Algae , vol.8 , pp. 715-725
    • Davis, T.W.1    Berry, D.L.2    Boyer, G.L.3    Gobler, C.J.4
  • 12
    • 80053257116 scopus 로고    scopus 로고
    • Increasing oxygen radicals and water temperature select for toxic microcystis sp
    • Dziallas, C. & Grossart, H. P. Increasing oxygen radicals and water temperature select for toxic Microcystis sp. PLoS One 6, e25569, doi: 10.1371/journal.pone.0025569 (2011
    • (2011) PLoS One , vol.6 , pp. e25569
    • Dziallas, C.1    Grossart, H.P.2
  • 13
    • 0037088111 scopus 로고    scopus 로고
    • Microbial activity and bacterial community structure during degradation of microcystins
    • Christoffersen, K., Lyck, S. & Winding, A. Microbial activity and bacterial community structure during degradation of microcystins. Aquatic Microbial Ecology 27, 125-136, doi: 10.3354/Ame027125 (2002
    • (2002) Aquatic Microbial Ecology , vol.27 , pp. 125-136
    • Christoffersen, K.1    Lyck, S.2    Winding, A.3
  • 14
    • 20044362251 scopus 로고    scopus 로고
    • Zooplankton community structure, micro-zooplankton grazing impact, and seston energy content in the st johns river system, Florida as influenced by the toxic cyanobacterium cylindrospermopsis raciborskii
    • Leonard, J. A. & Paerl, H. W. Zooplankton community structure, micro-zooplankton grazing impact, and seston energy content in the St. Johns river system, Florida as influenced by the toxic cyanobacterium Cylindrospermopsis raciborskii. Hydrobiologia 537, 89-97, doi: 10.1007/s10750-004-2483-9 (2005
    • (2005) Hydrobiologia , vol.537 , pp. 89-97
    • Leonard, J.A.1    Paerl, H.W.2
  • 15
    • 84876559227 scopus 로고    scopus 로고
    • Metagenomic identification of bacterioplankton taxa and pathways involved in microcystin degradation in lake erie
    • ARTN e61890
    • Mou, X. Z., Lu, X. X., Jacob, J., Sun, S. L. & Heath, R. Metagenomic Identification of Bacterioplankton Taxa and Pathways Involved in Microcystin Degradation in Lake Erie. PLoS ONE 8, doi: ARTN e61890 DOI 10.1371/journal.pone.0061890 (2013).
    • (2013) PLoS ONE , vol.8
    • Mou, X.Z.1    Lu, X.X.2    Jacob, J.3    Sun, S.L.4    Heath, R.5
  • 16
    • 84887579783 scopus 로고    scopus 로고
    • Decrease of nh4+-n by bacterioplankton accelerated the removal of cyanobacterial blooms in aerated aquatic ecosystem
    • Yang, X. et al. Decrease of NH4+-N by bacterioplankton accelerated the removal of cyanobacterial blooms in aerated aquatic ecosystem. Journal of Environmental Sciences-China 25, 2223-2228, doi: 10.1016/S1001-0742(12)60282-4 (2013
    • (2013) Journal of Environmental Sciences-China , vol.25 , pp. 2223-2228
    • Yang, X.1
  • 17
    • 79959791909 scopus 로고    scopus 로고
    • Phytoplankton community succession shaping bacterioplankton community composition in lake taihu
    • Niu, Y. et al. Phytoplankton community succession shaping bacterioplankton community composition in Lake Taihu, China. Water Res 45, 4169-4182, doi: 10.1016/j.watres.2011.05.022 (2011
    • (2011) China. Water Res , vol.45 , pp. 4169-4182
    • Niu, Y.1
  • 18
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive earth's biogeochemical cycles
    • Falkowski, P. G., Fenchel, T. & Delong, E. F. The microbial engines that drive Earth's biogeochemical cycles. Science 320, 1034-1039, doi: 10.1126/science.1153213 (2008
    • (2008) Science , vol.320 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    Delong, E.F.3
  • 19
    • 84921668207 scopus 로고    scopus 로고
    • Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping
    • Zhao, M. et al. Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping. The ISME journal 8, 2045-2055, doi: 10.1038/ismej.2014.46 (2014
    • (2014) The ISME Journal , vol.8 , pp. 2045-2055
    • Zhao, M.1
  • 21
    • 84900490246 scopus 로고    scopus 로고
    • Are algal blooms occurring later in lake taihu? Climate local effects outcompete mitigation prevention
    • Duan, H. T., Ma, R. H., Zhang, Y. C. & Loiselle, S. A. Are algal blooms occurring later in Lake Taihu? Climate local effects outcompete mitigation prevention. Journal of Plankton Research 36, 866-871, doi: 10.1093/plankt/fbt132 (2014
    • (2014) Journal of Plankton Research , vol.36 , pp. 866-871
    • Duan, H.T.1    Ma, R.H.2    Zhang, Y.C.3    Loiselle, S.A.4
  • 22
    • 84873537424 scopus 로고    scopus 로고
    • Growth characteristics of algae during early stages of phytoplankton bloom in lake taihu, China
    • Jia, Y., Dan, J., Zhang, M. & Kong, F. Growth characteristics of algae during early stages of phytoplankton bloom in Lake Taihu, China. J Environ Sci (China) 25, 254-261 (2013
    • (2013) J Environ Sci (China) , vol.25 , pp. 254-261
    • Jia, Y.1    Dan, J.2    Zhang, M.3    Kong, F.4
  • 23
    • 33947270946 scopus 로고    scopus 로고
    • Nitrogen dynamics and microbial food web structure during a summer cyanobacterial bloom in a subtropical, shallow, well-mixed, eutrophic lake (lake taihu, China
    • McCarthy, M. J. et al. Nitrogen dynamics and microbial food web structure during a summer cyanobacterial bloom in a subtropical, shallow, well-mixed, eutrophic lake (Lake Taihu, China). Hydrobiologia 581, 195-207, doi: 10.1007/s10750-006-0496-2 (2007
    • (2007) Hydrobiologia , vol.581 , pp. 195-207
    • McCarthy, M.J.1
  • 24
    • 44249125950 scopus 로고    scopus 로고
    • Controlling factors of spring-summer phytoplankton succession in lake taihu (meiliang bay, China
    • Ke, Z. X., Xie, P. & Guo, L. G. Controlling factors of spring-summer phytoplankton succession in Lake Taihu (Meiliang Bay, China). Hydrobiologia 607, 41-49, doi: 10.1007/s10750-008-9365-5 (2008
    • (2008) Hydrobiologia , vol.607 , pp. 41-49
    • Ke, Z.X.1    Xie, P.2    Guo, L.G.3
  • 25
    • 84890027153 scopus 로고    scopus 로고
    • Environmental factors controlling colony formation in blooms of the cyanobacteria microcystis spp. in lake taihu
    • Ma, J. R. et al. Environmental factors controlling colony formation in blooms of the cyanobacteria Microcystis spp. in Lake Taihu, China. Harmful Algae 31, 136-142, doi: 10.1016/j.hal.2013.10.016 (2014
    • (2014) China. Harmful Algae , vol.31 , pp. 136-142
    • Ma, J.R.1
  • 26
    • 60049083597 scopus 로고    scopus 로고
    • Bacterial and archaeal assemblages in sediments of a large shallow freshwater lake, lake taihu, as revealed by denaturing gradient gel electrophoresis
    • Liu, F. H. et al. Bacterial and archaeal assemblages in sediments of a large shallow freshwater lake, Lake Taihu, as revealed by denaturing gradient gel electrophoresis. Journal of applied microbiology 106, 1022-1032, doi: 10.1111/j.1365-2672.2008.04069.x (2009
    • (2009) Journal of Applied Microbiology , vol.106 , pp. 1022-1032
    • Liu, F.H.1
  • 27
    • 79959791909 scopus 로고    scopus 로고
    • Phytoplankton community succession shaping bacterioplankton community composition in lake taihu
    • Niu, Y. et al. Phytoplankton community succession shaping bacterioplankton community composition in Lake Taihu, China. Water research 45, 4169-4182, doi: 10.1016/j.watres.2011.05.022 (2011
    • (2011) China. Water Research , vol.45 , pp. 4169-4182
    • Niu, Y.1
  • 28
    • 84925545861 scopus 로고    scopus 로고
    • Dissolved organic carbon and relationship with bacterioplankton community composition in 3 lake regions of lake taihu, China
    • Pang, X. et al. Dissolved organic carbon and relationship with bacterioplankton community composition in 3 lake regions of Lake Taihu, China. Canadian journal of microbiology 60, 669-680, doi: 10.1139/cjm-2013-0847 (2014
    • (2014) Canadian Journal of Microbiology , vol.60 , pp. 669-680
    • Pang, X.1
  • 29
    • 84879184958 scopus 로고    scopus 로고
    • Vertical diversity of sediment bacterial communities in two different trophic states of the eutrophic lake taihu, China
    • Shao, K., Gao, G., Wang, Y., Tang, X. & Qin, B. Vertical diversity of sediment bacterial communities in two different trophic states of the eutrophic Lake Taihu, China. J Environ Sci (China) 25, 1186-1194 (2013
    • (2013) J Environ Sci (China) , vol.25 , pp. 1186-1194
    • Shao, K.1    Gao, G.2    Wang, Y.3    Tang, X.4    Qin, B.5
  • 30
    • 84869216713 scopus 로고    scopus 로고
    • Specific association between bacteria and buoyant microcystis colonies compared with other bulk bacterial communities in the eutrophic lake taihu China
    • Shi, L., Cai, Y., Kong, F. & Yu, Y. Specific association between bacteria and buoyant Microcystis colonies compared with other bulk bacterial communities in the eutrophic Lake Taihu, China. Environmental microbiology reports 4, 669-678, doi: 10.1111/1758-2229.12001 (2012
    • (2012) Environmental Microbiology Reports , vol.4 , pp. 669-678
    • Shi, L.1    Cai, Y.2    Kong, F.3    Yu, Y.4
  • 31
    • 70449115199 scopus 로고    scopus 로고
    • Phylogenetic diversity and specificity of bacteria associated with microcystis aeruginosa and other cyanobacteria
    • Shi, L. et al. Phylogenetic diversity and specificity of bacteria associated with Microcystis aeruginosa and other cyanobacteria. J Environ Sci (China) 21, 1581-1590 (2009
    • (2009) J Environ Sci (China) , vol.21 , pp. 1581-1590
    • Shi, L.1
  • 32
    • 70349852874 scopus 로고    scopus 로고
    • The vertical distribution of bacterial and archaeal communities in the water and sediment of lake taihu
    • Ye, W. et al. The vertical distribution of bacterial and archaeal communities in the water and sediment of Lake Taihu. FEMS Microbiol Ecol 70, 107-120, doi: 10.1111/j.1574-6941.2009.00761.x (2009
    • (2009) FEMS Microbiol Ecol , vol.70 , pp. 107-120
    • Ye, W.1
  • 33
    • 38949142333 scopus 로고    scopus 로고
    • Characterization of depth-related microbial communities in lake sediment by denaturing gradient gel electrophoresis of amplified 16s rrna fragments
    • Zhao, X. et al. Characterization of depth-related microbial communities in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rRNA fragments. J Environ Sci (China) 20, 224-230 (2008
    • (2008) J Environ Sci (China) , vol.20 , pp. 224-230
    • Zhao, X.1
  • 34
    • 84885424298 scopus 로고    scopus 로고
    • The response of epiphytic microbes to habitat and growth status of potamogeton malaianus miq. in lake taihu
    • Cai, X. et al. The response of epiphytic microbes to habitat and growth status of Potamogeton malaianus Miq. in Lake Taihu. Journal of basic microbiology. doi: 10.1002/jobm.201200220 (2013
    • (2013) Journal of Basic Microbiology
    • Cai, X.1
  • 35
    • 84856051071 scopus 로고    scopus 로고
    • Characterization of the bacterial community composition in a hypoxic zone induced by microcystis blooms in lake taihu China
    • Li, H., Xing, P. & Wu, Q. L. Characterization of the bacterial community composition in a hypoxic zone induced by Microcystis blooms in Lake Taihu, China. FEMS microbiology ecology 79, 773-784, doi: 10.1111/j.1574-6941.2011.01262.x (2012
    • (2012) FEMS Microbiology Ecology , vol.79 , pp. 773-784
    • Li, H.1    Xing, P.2    Wu, Q.L.3
  • 36
    • 84876218762 scopus 로고    scopus 로고
    • Submerged macrophytes modify bacterial community composition in sediments in a large, shallow, freshwater lake
    • Zhao, D. Y. et al. Submerged macrophytes modify bacterial community composition in sediments in a large, shallow, freshwater lake. Canadian journal of microbiology 59, 237-244, doi: 10.1139/cjm-2012-0554 (2013
    • (2013) Canadian Journal of Microbiology , vol.59 , pp. 237-244
    • Zhao, D.Y.1
  • 37
    • 78649745781 scopus 로고    scopus 로고
    • Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in lake taihu China
    • Wu, Y. et al. Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in Lake Taihu, China. Environ Microbiol Rep 2, 569-576, doi: 10.1111/j.1758-2229.2010.00146.x (2010
    • (2010) Environ Microbiol Rep , vol.2 , pp. 569-576
    • Wu, Y.1
  • 38
    • 80051664960 scopus 로고    scopus 로고
    • Active and silent members in the mlr gene cluster of a microcystin-degrading bacterium isolated from lake taihu China
    • Jiang, Y., Shao, J., Wu, X., Xu, Y. & Li, R. Active and silent members in the mlr gene cluster of a microcystin-degrading bacterium isolated from Lake Taihu, China. FEMS Microbiol Lett 322, 108-114, doi: 10.1111/j.1574-6968.2011.02337.x (2011
    • (2011) FEMS Microbiol Lett , vol.322 , pp. 108-114
    • Jiang, Y.1    Shao, J.2    Wu, X.3    Xu, Y.4    Li, R.5
  • 39
    • 77950913348 scopus 로고    scopus 로고
    • Degradation of microcystin-lr and rr by a stenotrophomonas sp. Strain ems isolated from lake taihu, China
    • Chen, J. et al. Degradation of microcystin-LR and RR by a Stenotrophomonas sp. strain EMS isolated from Lake Taihu, China. Int J Mol Sci 11, 896-911, doi: 10.3390/ijms11030896 (2010
    • (2010) Int J Mol Sci , vol.11 , pp. 896-911
    • Chen, J.1
  • 40
    • 84871737708 scopus 로고    scopus 로고
    • Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome
    • Jiang, B. et al. Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome. Sci Rep 2, 936, doi: 10.1038/srep00936 (2012
    • (2012) Sci Rep , vol.2 , pp. 936
    • Jiang, B.1
  • 41
    • 35148888609 scopus 로고    scopus 로고
    • Microbial population structures in the deep marine biosphere
    • Huber, J. A. et al. Microbial population structures in the deep marine biosphere. Science 318, 97-100, doi: 10.1126/science.1146689 (2007
    • (2007) Science , vol.318 , pp. 97-100
    • Huber, J.A.1
  • 45
    • 77952243141 scopus 로고    scopus 로고
    • Qiime allows analysis of high-throughput community sequencing data
    • Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7, 335-336, doi: 10.1038/nmeth.f.303 (2010
    • (2010) Nat Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1
  • 46
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than blast
    • Edgar, R. C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461, doi: 10.1093/bioinformatics/btq461 (2010
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 47
    • 84857122937 scopus 로고    scopus 로고
    • An improved greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
    • McDonald, D. et al. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J 6, 610-618, doi: 10.1038/ismej.2011.139 (2012
    • (2012) ISME J , vol.6 , pp. 610-618
    • McDonald, D.1
  • 48
    • 79952006773 scopus 로고    scopus 로고
    • Chimeric 16s rrna sequence formation and detection in sanger and 454-pyrosequenced PCR amplicons
    • Haas, B. J. et al. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res 21, 494-504, doi: 10.1101/gr.112730.110 (2011
    • (2011) Genome Res , vol.21 , pp. 494-504
    • Haas, B.J.1
  • 49
    • 75249107844 scopus 로고    scopus 로고
    • Pynast: A flexible tool for aligning sequences to a template alignment
    • Caporaso, J. G. et al. PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics 26, 266-267, doi: 10.1093/bioinformatics/btp636 (2010
    • (2010) Bioinformatics , vol.26 , pp. 266-267
    • Caporaso, J.G.1
  • 50
    • 77949718257 scopus 로고    scopus 로고
    • Fasttree 2-Approximately maximum-likelihood trees for large alignments
    • Price, M. N., Dehal, P. S. & Arkin, A. P. FastTree 2-Approximately maximum-likelihood trees for large alignments. PLoS ONE 5, e9490, doi: 10.1371/journal.pone.0009490 (2010
    • (2010) PLoS ONE , vol.5 , pp. e9490
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 51
    • 34047251829 scopus 로고    scopus 로고
    • Phylogenetic diversity (pd) and biodiversity conservation: Some bioinformatics challenges
    • Faith, D. P. & Baker, A. M. Phylogenetic diversity (PD) and biodiversity conservation: some bioinformatics challenges. Evol Bioinform Online 2, 121-128 (2006
    • (2006) Evol Bioinform Online , vol.2 , pp. 121-128
    • Faith, D.P.1    Baker, A.M.2
  • 52
    • 33344464667 scopus 로고
    • Measurement of diversity
    • Simpson, E. H. Measurement of diversity. Nature 163, 688 (1949
    • (1949) Nature , vol.163 , pp. 688
    • Simpson, E.H.1
  • 53
    • 29144464937 scopus 로고    scopus 로고
    • Unifrac: A new phylogenetic method for comparing microbial communities
    • Lozupone, C. & Knight, R. UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71, 8228-8235, doi: 10.1128/AEM.71.12.8228-8235.2005 (2005
    • (2005) Appl Environ Microbiol , vol.71 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 55
    • 84991526597 scopus 로고    scopus 로고
    • Emperor: A tool for visualizing high-throughput microbial community data
    • Vazquez-Baeza, Y., Pirrung, M., Gonzalez, A. & Knight, R. EMPeror: a tool for visualizing high-throughput microbial community data. Gigascience 2, 16, doi: 10.1186/2047-217X-2-16 (2013
    • (2013) Gigascience , vol.2 , pp. 16
    • Vazquez-Baeza, Y.1    Pirrung, M.2    Gonzalez, A.3    Knight, R.4
  • 57
    • 77950904616 scopus 로고    scopus 로고
    • Forensic identification using skin bacterial communities
    • Fierer, N. et al. Forensic identification using skin bacterial communities. Proc Natl Acad Sci USA 107, 6477-6481, doi: 10.1073/pnas.1000162107 (2010
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 6477-6481
    • Fierer, N.1
  • 58
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel, N. The detection of disease clustering and a generalized regression approach. Cancer Res 27, 209-220 (1967
    • (1967) Cancer Res , vol.27 , pp. 209-220
    • Mantel, N.1
  • 59
    • 84863920287 scopus 로고    scopus 로고
    • Microbial interactions: From networks to models
    • Faust, K. & Raes, J. Microbial interactions: from networks to models. Nature Reviews Microbiology 10, 538-550, doi: 10.1038/Nrmicro2832 (2012
    • (2012) Nature Reviews Microbiology , vol.10 , pp. 538-550
    • Faust, K.1    Raes, J.2
  • 60
    • 84855949949 scopus 로고    scopus 로고
    • Using network analysis to explore co-occurrence patterns in soil microbial communities
    • Barberan, A., Bates, S. T., Casamayor, E. O. & Fierer, N. Using network analysis to explore co-occurrence patterns in soil microbial communities. Isme Journal 6, 343-351, doi: 10.1038/ismej.2011.119 (2012
    • (2012) Isme Journal , vol.6 , pp. 343-351
    • Barberan, A.1    Bates, S.T.2    Casamayor, E.O.3    Fierer, N.4
  • 61
    • 79952136790 scopus 로고    scopus 로고
    • Functional molecular ecological networks
    • Zhou, J. et al. Functional molecular ecological networks. MBio 1, doi: 10.1128/mBio.00169-10 (2010
    • (2010) MBio , vol.1
    • Zhou, J.1
  • 62
    • 77950251400 scopus 로고    scopus 로고
    • A human gut microbial gene catalogue established by metagenomic sequencing
    • Qin, J. et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464, 59-65, doi: 10.1038/nature08821 (2010
    • (2010) Nature , vol.464 , pp. 59-65
    • Qin, J.1
  • 63
    • 77954238817 scopus 로고    scopus 로고
    • A global network of coexisting microbes from environmental and whole-genome sequence data
    • Chaffron, S., Rehrauer, H., Pernthaler, J. & von Mering, C. A global network of coexisting microbes from environmental and whole-genome sequence data. Genome Res 20, 947-959, doi: 10.1101/gr.104521.109 (2010
    • (2010) Genome Res , vol.20 , pp. 947-959
    • Chaffron, S.1    Rehrauer, H.2    Pernthaler, J.3    Von Mering, C.4
  • 64
    • 80052061077 scopus 로고    scopus 로고
    • Marine bacterial, archaeal and protistan association networks reveal ecological linkages
    • Steele, J. A. et al. Marine bacterial, archaeal and protistan association networks reveal ecological linkages. ISME J 5, 1414-1425, doi: 10.1038/ismej.2011.24 (2011
    • (2011) ISME J , vol.5 , pp. 1414-1425
    • Steele, J.A.1
  • 65
    • 38449101120 scopus 로고    scopus 로고
    • Integration of biological networks and gene expression data using cytoscape
    • Cline, M. S. et al. Integration of biological networks and gene expression data using Cytoscape. Nat Protoc 2, 2366-2382, doi: 10.1038/nprot.2007.324 (2007
    • (2007) Nat Protoc , vol.2 , pp. 2366-2382
    • Cline, M.S.1
  • 66
    • 2942552459 scopus 로고    scopus 로고
    • An automated method for finding molecular complexes in large protein interaction networks
    • Bader, G. D. & Hogue, C. W. An automated method for finding molecular complexes in large protein interaction networks. BMC Bioinformatics 4, 2, doi: 10.1186/1471-2105-4-2 (2003
    • (2003) BMC Bioinformatics , vol.4 , pp. 2
    • Bader, G.D.1    Hogue, C.W.2
  • 67
    • 75849154707 scopus 로고    scopus 로고
    • Circumpolar synchrony in big river bacterioplankton
    • Crump, B. C. et al. Circumpolar synchrony in big river bacterioplankton. Proc Natl Acad Sci USA 106, 21208-21212, doi: 10.1073/pnas.0906149106 (2009
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 21208-21212
    • Crump, B.C.1
  • 68
    • 34250795540 scopus 로고    scopus 로고
    • Interannual dynamics and phenology of bacterial communities in a eutrophic lake
    • Shade, A. et al. Interannual dynamics and phenology of bacterial communities in a eutrophic lake. Limnology and Oceanography 52, 487-494 (2007
    • (2007) Limnology and Oceanography , vol.52 , pp. 487-494
    • Shade, A.1
  • 69
    • 84855951093 scopus 로고    scopus 로고
    • Coherent dynamics and association networks among lake bacterioplankton taxa
    • Eiler, A., Heinrich, F. & Bertilsson, S. Coherent dynamics and association networks among lake bacterioplankton taxa. Isme Journal 6, 330-342, doi: 10.1038/ismej.2011.113 (2012
    • (2012) Isme Journal , vol.6 , pp. 330-342
    • Eiler, A.1    Heinrich, F.2    Bertilsson, S.3
  • 70
    • 84876336439 scopus 로고    scopus 로고
    • Autotrophic growth of bacterial and archaeal ammonia oxidizers in freshwater sediment microcosms incubated at different temperatures
    • Wu, Y. et al. Autotrophic growth of bacterial and archaeal ammonia oxidizers in freshwater sediment microcosms incubated at different temperatures. Appl Environ Microbiol 79, 3076-3084, doi: 10.1128/AEM.00061-13 (2013
    • (2013) Appl Environ Microbiol , vol.79 , pp. 3076-3084
    • Wu, Y.1
  • 71
    • 38949149446 scopus 로고    scopus 로고
    • Low temperature decreases the phylogenetic diversity of ammonia-oxidizing archaea and bacteria in aquarium biofiltration systems
    • Urakawa, H., Tajima, Y., Numata, Y. & Tsuneda, S. Low temperature decreases the phylogenetic diversity of ammonia-oxidizing archaea and bacteria in aquarium biofiltration systems. Appl Environ Microbiol 74, 894-900, doi: 10.1128/AEM.01529-07 (2008
    • (2008) Appl Environ Microbiol , vol.74 , pp. 894-900
    • Urakawa, H.1    Tajima, Y.2    Numata, Y.3    Tsuneda, S.4
  • 72
    • 79957684288 scopus 로고    scopus 로고
    • Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil
    • Tourna, M. et al. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proc Natl Acad Sci USA 108, 8420-8425, doi: 10.1073/pnas.1013488108 (2011
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 8420-8425
    • Tourna, M.1
  • 73
    • 41849095617 scopus 로고    scopus 로고
    • Growth activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms
    • Tourna, M., Freitag, T. E., Nicol, G. W. & Prosser, J. I. Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol 10, 1357-1364, doi: 10.1111/j.1462-2920.2007.01563.x (2008
    • (2008) Environ Microbiol , vol.10 , pp. 1357-1364
    • Tourna, M.1    Freitag, T.E.2    Nicol, G.W.3    Prosser, J.I.4
  • 74
    • 28044457197 scopus 로고    scopus 로고
    • Synchrony and seasonality in bacterioplankton communities of two temperate rivers
    • Crump, B. C. & Hobbie, J. E. Synchrony and seasonality in bacterioplankton communities of two temperate rivers. Limnology and Oceanography 50, 1718-1729 (2005
    • (2005) Limnology and Oceanography , vol.50 , pp. 1718-1729
    • Crump, B.C.1    Hobbie, J.E.2
  • 76
    • 67650364043 scopus 로고    scopus 로고
    • Seasonal variation of microcystis in lake taihu and its relationships with environmental factors
    • Tan, X. et al. Seasonal variation of Microcystis in Lake Taihu and its relationships with environmental factors. J Environ Sci-China 21, 892-899, doi: 10.1016/S1001-0742(08)62359-1 (2009
    • (2009) J Environ Sci-China , vol.21 , pp. 892-899
    • Tan, X.1
  • 77
    • 77953552931 scopus 로고    scopus 로고
    • Moderate resolution imaging spectroradiometer (modis) observations of cyanobacteria blooms in taihu lake, China
    • Hu, C. et al. Moderate Resolution Imaging Spectroradiometer (MODIS) observations of cyanobacteria blooms in Taihu Lake, China. J Geophys Res-Oceans 115, doi: 10.1029/2009jc005511 (2010
    • (2010) J Geophys Res-Oceans , vol.115
    • Hu, C.1
  • 78
    • 79959790821 scopus 로고    scopus 로고
    • Temporal and spatial variability of chlorophyll a concentration in lake taihu using modis time-series data
    • Zhang, Y. C. et al. Temporal and spatial variability of chlorophyll a concentration in Lake Taihu using MODIS time-series data. Hydrobiologia 661, 235-250, doi: 10.1007/s10750-010-0528-9 (2011
    • (2011) Hydrobiologia , vol.661 , pp. 235-250
    • Zhang, Y.C.1
  • 79
    • 79957902184 scopus 로고    scopus 로고
    • Spatial-seasonal dynamics of chromophoric dissolved organic matter in lake taihu, a large eutrophic, shallow lake in China
    • Zhang, Y. L. et al. Spatial-seasonal dynamics of chromophoric dissolved organic matter in Lake Taihu, a large eutrophic, shallow lake in China. Organic Geochemistry 42, 510-519, doi: 10.1016/j.orggeochem.2011.03.007 (2011
    • (2011) Organic Geochemistry , vol.42 , pp. 510-519
    • Zhang, Y.L.1
  • 80
    • 84879022691 scopus 로고    scopus 로고
    • Seasonal variation of phytoplankton nutrient limitation in lake taihu China: A monthly study from year 2011 to 2012
    • Xu, S. et al. Seasonal variation of phytoplankton nutrient limitation in Lake Taihu, China: A monthly study from Year 2011 to 2012. Ecotoxicol Environ Saf 94, 190-196, doi: 10.1016/j.ecoenv.2013.05.006 (2013
    • (2013) Ecotoxicol Environ Saf , vol.94 , pp. 190-196
    • Xu, S.1
  • 81
    • 84945477484 scopus 로고    scopus 로고
    • The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign
    • Salcher, M. M., Neuenschwander, S. M., Posch, T. & Pernthaler, J. The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign. ISME J. doi: 10.1038/ismej.2015.55 (2015
    • (2015) ISME J
    • Salcher, M.M.1    Neuenschwander, S.M.2    Posch, T.3    Pernthaler, J.4
  • 82
    • 84919740760 scopus 로고    scopus 로고
    • Key roles for freshwater actinobacteria revealed by deep metagenomic sequencing
    • Ghai, R., Mizuno, C. M., Picazo, A., Camacho, A. & Rodriguez-Valera, F. Key roles for freshwater Actinobacteria revealed by deep metagenomic sequencing. Mol Ecol 23, 6073-6090, doi: 10.1111/mec.12985 (2014
    • (2014) Mol Ecol , vol.23 , pp. 6073-6090
    • Ghai, R.1    Mizuno, C.M.2    Picazo, A.3    Camacho, A.4    Rodriguez-Valera, F.5
  • 83
    • 84926228825 scopus 로고    scopus 로고
    • Comparative single-cell genomics reveals potential ecological niches for the freshwater aci actinobacteria lineage
    • Ghylin, T. W. et al. Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. ISME J 8, 2503-2516, doi: 10.1038/ismej.2014.135 (2014
    • (2014) ISME J , vol.8 , pp. 2503-2516
    • Ghylin, T.W.1
  • 84
    • 84986749833 scopus 로고
    • Chroococcoid cyanobacteria in the sea: A ubiquitous and diverse phototrophic biomass1
    • Johnson, P. W. & Sieburth, J. M. Chroococcoid cyanobacteria in the sea: A ubiquitous and diverse phototrophic biomass1. Limnology and Oceanography 24, 928-935 (1979
    • (1979) Limnology and Oceanography , vol.24 , pp. 928-935
    • Johnson, P.W.1    Sieburth, J.M.2
  • 85
    • 60749129913 scopus 로고    scopus 로고
    • High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms
    • Berg, K. A. et al. High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms. ISME J 3, 314-325, doi: 10.1038/ismej.2008.110 (2009
    • (2009) ISME J , vol.3 , pp. 314-325
    • Berg, K.A.1
  • 86
    • 84878758238 scopus 로고    scopus 로고
    • Analysis of the attached microbial community on mucilaginous cyanobacterial aggregates in the eutrophic lake taihu reveals the importance of planctomycetes
    • Cai, H. Y., Yan, Z. S., Wang, A. J., Krumholz, L. R. & Jiang, H. L. Analysis of the Attached Microbial Community on Mucilaginous Cyanobacterial Aggregates in the Eutrophic Lake Taihu Reveals the Importance of Planctomycetes. Microb Ecol 66, 73-83, doi: 10.1007/s00248-013-0224-1 (2013
    • (2013) Microb Ecol , vol.66 , pp. 73-83
    • Cai, H.Y.1    Yan, Z.S.2    Wang, A.J.3    Krumholz, L.R.4    Jiang, H.L.5


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