-
2
-
-
18444391808
-
Distribution and stability of sulfate-reducing prokaryotic and hydrogenotrophic methanogenic assemblages in nutrient-impacted regions of the florida everglades
-
Castro, H., Newman, S., Reddy, K.R. Ogram, A. (2005) Distribution and stability of sulfate-reducing prokaryotic and hydrogenotrophic methanogenic assemblages in nutrient-impacted regions of the florida everglades. Appl Environ Microbiol 71, 2695 2704.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2695-2704
-
-
Castro, H.1
Newman, S.2
Reddy, K.R.3
Ogram, A.4
-
3
-
-
33645112674
-
Syntrophic-archaeal Associations in a Nutrient-impacted freshwater marsh
-
Chauhan, A., Reddy, K.R. Ogram, A.V. (2006) Syntrophic-archaeal Associations in a Nutrient-impacted freshwater marsh. J Appl Microbiol 100, 73 84.
-
(2006)
J Appl Microbiol
, vol.100
, pp. 73-84
-
-
Chauhan, A.1
Reddy, K.R.2
Ogram, A.V.3
-
4
-
-
0036052116
-
Estimation of methanotroph abundance in a freshwater lake sediment
-
Costello, A.M., Auman, A.J., Macalady, J.L., Scow, K.M. Lidstrom, M.E. (2002) Estimation of methanotroph abundance in a freshwater lake sediment. Environ Microbiol 4, 443 450.
-
(2002)
Environ Microbiol
, vol.4
, pp. 443-450
-
-
Costello, A.M.1
Auman, A.J.2
MacAlady, J.L.3
Scow, K.M.4
Lidstrom, M.E.5
-
5
-
-
10044278979
-
Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes
-
Eiler, A. Bertilsson, S. (2004) Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes. Environ Microbiol 6, 1228 1243.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1228-1243
-
-
Eiler, A.1
Bertilsson, S.2
-
6
-
-
34249879036
-
Flavobacteria blooms in four eutrophic lakes: Linking population dynamics of freshwater bacterioplankton to resource availability
-
Eiler, A. Bertilsson, S. (2007) Flavobacteria blooms in four eutrophic lakes: linking population dynamics of freshwater bacterioplankton to resource availability. Appl Environ Microbiol 73, 3511 3518.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 3511-3518
-
-
Eiler, A.1
Bertilsson, S.2
-
7
-
-
0026760934
-
The use of rRNA sequences and fluorescent probes to investigate the phylogenetic positions of the anaerobic ciliate Metopus palaeformis and its archaebacterial endosymbiont
-
Embley, T.M., Finlay, B.J., Thomas, R.H. Dyal, P.L. (1992) The use of rRNA sequences and fluorescent probes to investigate the phylogenetic positions of the anaerobic ciliate Metopus palaeformis and its archaebacterial endosymbiont. J Gen Microbiol 138, 1479 1487.
-
(1992)
J Gen Microbiol
, vol.138
, pp. 1479-1487
-
-
Embley, T.M.1
Finlay, B.J.2
Thomas, R.H.3
Dyal, P.L.4
-
8
-
-
0037259086
-
Characterization of a nitrate-respiring bacterial community using the nitrate reductase gene (narG) as a functional marker
-
Gregory, L.G., Bond, P.L., Richardson, D.J. Spiro, S. (2003) Characterization of a nitrate-respiring bacterial community using the nitrate reductase gene (narG) as a functional marker. Microbiology 149, 229 237.
-
(2003)
Microbiology
, vol.149
, pp. 229-237
-
-
Gregory, L.G.1
Bond, P.L.2
Richardson, D.J.3
Spiro, S.4
-
9
-
-
33744921889
-
The microbial diversity of inland waters
-
Hahn, M.W. (2006) The microbial diversity of inland waters. Curr Opin Biotechnol 17, 256 261.
-
(2006)
Curr Opin Biotechnol
, vol.17
, pp. 256-261
-
-
Hahn, M.W.1
-
10
-
-
17844401490
-
Effect of humic material on the bacterioplankton community composition in boreal lakes and mesocosms
-
Haukka, K., Heikkinen, E., Kairesalo, T., Karjalainen, H. Sivonen, K. (2005) Effect of humic material on the bacterioplankton community composition in boreal lakes and mesocosms. Environ Microbiol 7, 620 630.
-
(2005)
Environ Microbiol
, vol.7
, pp. 620-630
-
-
Haukka, K.1
Heikkinen, E.2
Kairesalo, T.3
Karjalainen, H.4
Sivonen, K.5
-
11
-
-
33646376687
-
Effect of nutrient loading on bacterioplankton community composition in lake mesocosms
-
Haukka, K., Kolmonen, E., Hyder, R., Hietala, J., Vakkilainen, K., Kairesalo, T., Haario, H. Sivonen, K. (2006) Effect of nutrient loading on bacterioplankton community composition in lake mesocosms. Microb Ecol 51, 137 146.
-
(2006)
Microb Ecol
, vol.51
, pp. 137-146
-
-
Haukka, K.1
Kolmonen, E.2
Hyder, R.3
Hietala, J.4
Vakkilainen, K.5
Kairesalo, T.6
Haario, H.7
Sivonen, K.8
-
12
-
-
0036207009
-
The ecology of Cytophaga-Flavobacteria in aquatic environments
-
Kirchman, D.L. (2002) The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39, 91 100.
-
(2002)
FEMS Microbiol Ecol
, vol.39
, pp. 91-100
-
-
Kirchman, D.L.1
-
13
-
-
0041381031
-
Vertical distributions of sulfate-reducing bacteria and methane-producing archaea quantified by oligonucleotide probe hybridization in the profundal sediment of a mesotrophic lake
-
Koizumi, Y., Takii, S., Nishino, M. Nakajima, T. (2003) Vertical distributions of sulfate-reducing bacteria and methane-producing archaea quantified by oligonucleotide probe hybridization in the profundal sediment of a mesotrophic lake. FEMS Microbiol Ecol 44, 101 108.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 101-108
-
-
Koizumi, Y.1
Takii, S.2
Nishino, M.3
Nakajima, T.4
-
14
-
-
6344294929
-
Diversity of cyanobacteria and heterotrophic bacteria in cyanobacterial blooms in Lake Joutikas, Finland
-
Kolmonen, E., Sivonen, K., Rapala, J. Haukka, K. (2004) Diversity of cyanobacteria and heterotrophic bacteria in cyanobacterial blooms in Lake Joutikas, Finland. Aquat Microb Ecol 36, 201 211.
-
(2004)
Aquat Microb Ecol
, vol.36
, pp. 201-211
-
-
Kolmonen, E.1
Sivonen, K.2
Rapala, J.3
Haukka, K.4
-
15
-
-
33947270946
-
Nitrogen dynamics and microbial food web structure during a summer cyanobacterial bloom in a subtropical, shallow, well-mixed, eutrophic lake (Lake Taihu, China)
-
McCarthy, M.J., Lavrentyev, P.J., Yang, L.Y., Zhang, L., Chen, Y.W., Qin, B.Q. Gardner, W.S. (2007) Nitrogen dynamics and microbial food web structure during a summer cyanobacterial bloom in a subtropical, shallow, well-mixed, eutrophic lake (Lake Taihu, China). Hydrobiologia 581, 195 207.
-
(2007)
Hydrobiologia
, vol.581
, pp. 195-207
-
-
McCarthy, M.J.1
Lavrentyev, P.J.2
Yang, L.Y.3
Zhang, L.4
Chen, Y.W.5
Qin, B.Q.6
Gardner, W.S.7
-
16
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer, G., de Waal, E.C. Uitterlinden, A.G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59, 695 700.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
17
-
-
0031439437
-
Sediment bacteria: Who's there, what are they doing, and what's new?
-
Nealson, K.H. (1997) Sediment bacteria: who's there, what are they doing, and what's new? Annu Rev Earth Planet Sci 25, 403 434.
-
(1997)
Annu Rev Earth Planet Sci
, vol.25
, pp. 403-434
-
-
Nealson, K.H.1
-
18
-
-
0030805150
-
Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
-
Øvreås, L., Forney, L., Daae, F.L. Torsvik, V. (1997) Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl Environ Microbiol 63, 3367 3373.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3367-3373
-
-
Øvreås, L.1
Forney, L.2
Daae, F.L.3
Torsvik, V.4
-
19
-
-
0037641305
-
Analysis of the sulfate-reducing bacterial and methanogenic archaeal populations in contrasting Antarctic sediments
-
Purdy, K.J., Nedwell, D.B. Embley, T.M. (2003) Analysis of the sulfate-reducing bacterial and methanogenic archaeal populations in contrasting Antarctic sediments. Appl Environ Microbiol 69, 3181 3191.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 3181-3191
-
-
Purdy, K.J.1
Nedwell, D.B.2
Embley, T.M.3
-
20
-
-
0034123066
-
Monitoring complex bacterial communities using culture-independent molecular techniques: Application to soil environment
-
Ranjard, L., Poly, F. Nazaret, S. (2000) Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment. Res Microbiol 151, 1 11.
-
(2000)
Res Microbiol
, vol.151
, pp. 1-11
-
-
Ranjard, L.1
Poly, F.2
Nazaret, S.3
-
21
-
-
0344483898
-
The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions
-
Rosselló-Mora, R., Thamdrup, B., Schaefer, H., Weller, R. Amann, R. (1999) The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions. Syst Appl Microbiol 22, 237 248.
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 237-248
-
-
Rosselló-Mora, R.1
Thamdrup, B.2
Schaefer, H.3
Weller, R.4
Amann, R.5
-
23
-
-
33947271334
-
Community structure of archaea and bacteria in a profundal lake sediment Lake Kinneret (Israel)
-
Schwarz, J.I., Eckertb, W. Conrada, R. (2007) Community structure of archaea and bacteria in a profundal lake sediment Lake Kinneret (Israel). Syst Appl Microbiol 30, 239 254.
-
(2007)
Syst Appl Microbiol
, vol.30
, pp. 239-254
-
-
Schwarz, J.I.1
Eckertb, W.2
Conrada, R.3
-
24
-
-
0033758417
-
Identification and characterization of ecologically significant prokaryotes in the sediment of freshwater lakes: Molecular and cultivation studies
-
Spring, S., Schlze, R., Overmann, J. Schleifer, K.H. (2000) Identification and characterization of ecologically significant prokaryotes in the sediment of freshwater lakes: molecular and cultivation studies. FEMS Microbiol Rev 24, 573 590.
-
(2000)
FEMS Microbiol Rev
, vol.24
, pp. 573-590
-
-
Spring, S.1
Schlze, R.2
Overmann, J.3
Schleifer, K.H.4
-
25
-
-
17444372781
-
Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques
-
Tamaki, H., Sekiguchi, Y., Hanada, S., Nakamura, K., Nomura, N., Matsumura, M. Kamagata, Y. (2005) Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl Environ Microbiol 71, 2162 2169.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2162-2169
-
-
Tamaki, H.1
Sekiguchi, Y.2
Hanada, S.3
Nakamura, K.4
Nomura, N.5
Matsumura, M.6
Kamagata, Y.7
-
26
-
-
0036566806
-
Heteroduplexes in mixed-template amplifications: Formation, consequence and elimination by 'reconditioning PCR'
-
Thompson, J.R., Marcelino, L.A. Polz, M.F. (2002) Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'. Nucleic Acids Res 30, 2083 2088.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2083-2088
-
-
Thompson, J.R.1
Marcelino, L.A.2
Polz, M.F.3
-
27
-
-
19444362669
-
Comparison of microbial community between two shallow freshwater lakes in middle Yangtze basin, East China
-
Tong, Y., Lin, G., Ke, X., Liu, F., Zhu, G., Gao, G. Shen, J. (2005) Comparison of microbial community between two shallow freshwater lakes in middle Yangtze basin, East China. Chemosphere 60, 85 92.
-
(2005)
Chemosphere
, vol.60
, pp. 85-92
-
-
Tong, Y.1
Lin, G.2
Ke, X.3
Liu, F.4
Zhu, G.5
Gao, G.6
Shen, J.7
-
28
-
-
0037052493
-
Prokaryotic diversity - Magnitude, dynamics, and controlling factors
-
Torsvik, V., Ovreas, L. Thingstad, T.F. (2002) Prokaryotic diversity - magnitude, dynamics, and controlling factors. Science 296, 1064 1066.
-
(2002)
Science
, vol.296
, pp. 1064-1066
-
-
Torsvik, V.1
Ovreas, L.2
Thingstad, T.F.3
-
29
-
-
0034554798
-
Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling
-
Urakawa, H., Yoshida, T., Nishimura, M. Ohwada, K. (2000) Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling. Environ Microbiol 2, 542 554.
-
(2000)
Environ Microbiol
, vol.2
, pp. 542-554
-
-
Urakawa, H.1
Yoshida, T.2
Nishimura, M.3
Ohwada, K.4
-
31
-
-
3442889142
-
Sedimentary geochemical evidence for recent eutrophication of Lake Chenghai, Yunnan, China
-
Wu, J.L., Gagan, M.K., Jiang, X., Xia, W. Wang, S. (2004) Sedimentary geochemical evidence for recent eutrophication of Lake Chenghai, Yunnan, China. J Paleolimnol 32, 85 94.
-
(2004)
J Paleolimnol
, vol.32
, pp. 85-94
-
-
Wu, J.L.1
Gagan, M.K.2
Jiang, X.3
Xia, W.4
Wang, S.5
-
32
-
-
34249896159
-
Sedimentary evidence for recent eutrophication in the northern basin of Lake Taihu, China: Human impacts on a large shallow lake
-
Wu, J.L., Huang, C.M., Zeng, H.A., Gerhard, S. Rick, B. (2007) Sedimentary evidence for recent eutrophication in the northern basin of Lake Taihu, China: human impacts on a large shallow lake. J Paleolimnol 38, 13 23.
-
(2007)
J Paleolimnol
, vol.38
, pp. 13-23
-
-
Wu, J.L.1
Huang, C.M.2
Zeng, H.A.3
Gerhard, S.4
Rick, B.5
-
33
-
-
34547593056
-
Genetic diversity of plankton community as depicted by PCR-DGGE fingerprinting and its relation to morphological composition and environmental factors in Lake Donghu
-
Yan, Q.Y., Yu, Y.H., Feng, W.S., Deng, W.N. Song, X.H. (2007) Genetic diversity of plankton community as depicted by PCR-DGGE fingerprinting and its relation to morphological composition and environmental factors in Lake Donghu. Microb Ecol 54, 290 297.
-
(2007)
Microb Ecol
, vol.54
, pp. 290-297
-
-
Yan, Q.Y.1
Yu, Y.H.2
Feng, W.S.3
Deng, W.N.4
Song, X.H.5
-
34
-
-
38849103564
-
Spatiotemporal heterogeneity of plankton communities in Lake Donghu, China, as revealed by PCR-denaturing gradient gel electrophoresis and its relation to biotic and abiotic factors
-
Yu, Y., Yan, Q. Feng, W. (2008) Spatiotemporal heterogeneity of plankton communities in Lake Donghu, China, as revealed by PCR-denaturing gradient gel electrophoresis and its relation to biotic and abiotic factors. FEMS Microbiol Ecol 63, 328 337.
-
(2008)
FEMS Microbiol Ecol
, vol.63
, pp. 328-337
-
-
Yu, Y.1
Yan, Q.2
Feng, W.3
-
35
-
-
9644263929
-
Optimized sequence retrieval from single bands of TGGE (temperature gradient gel electrophoresis) profiles of the amplified 16S rDNA fragments from an activated sludge system
-
Zhang, X.L., Yan, X., Gao, P.P., Wang, L.H., Zhou, Z.H. Zhao, L.P. (2005) Optimized sequence retrieval from single bands of TGGE (temperature gradient gel electrophoresis) profiles of the amplified 16S rDNA fragments from an activated sludge system. J Microbiol Methods 60, 1 11.
-
(2005)
J Microbiol Methods
, vol.60
, pp. 1-11
-
-
Zhang, X.L.1
Yan, X.2
Gao, P.P.3
Wang, L.H.4
Zhou, Z.H.5
Zhao, L.P.6
-
36
-
-
0030070838
-
DNA recovery from soils of diverse composition
-
Zhou, J., Bruns, M.A. Tiedje, J.M. (1996) DNA recovery from soils of diverse composition. Appl Environ Microbiol 62, 316 322.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 316-322
-
-
Zhou, J.1
Bruns, M.A.2
Tiedje, J.M.3
-
37
-
-
0031932022
-
Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake
-
Zwart, G., Huismans, R., van Agterveld, M.P., Van de Peer, Y., De Rijk, P., Eenhoorn, H., Muyzer, G., van Hannen, E.J. et al. (1998) Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake. FEMS Microbiol Ecol 25, 159 169.
-
(1998)
FEMS Microbiol Ecol
, vol.25
, pp. 159-169
-
-
Zwart, G.1
Huismans, R.2
Van Agterveld, M.P.3
Van De Peer, Y.4
De Rijk, P.5
Eenhoorn, H.6
Muyzer, G.7
Van Hannen, E.J.8
-
38
-
-
0037178021
-
Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
-
Zwart, G., Crump, B.C., Kamst-van Agterveld, M.P., Hagen, F. Han, S. (2002) Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat Microb Ecol 28, 141 155.
-
(2002)
Aquat Microb Ecol
, vol.28
, pp. 141-155
-
-
Zwart, G.1
Crump, B.C.2
Kamst-Van Agterveld, M.P.3
Hagen, F.4
Han, S.5
|