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Volumn 9, Issue 9, 2015, Pages 1737-1743

Identification of major factors associated with failed clinical molecular oncology testing performed by next generation sequencing (NGS)

Author keywords

Diagnostic biopsy; DNA degradation and purity; Failed analysis; Molecular oncology testing by NGS; Number of cores; Site and type of biopsy

Indexed keywords

DNA;

EID: 84945466512     PISSN: 15747891     EISSN: 18780261     Source Type: Journal    
DOI: 10.1016/j.molonc.2015.05.004     Document Type: Article
Times cited : (59)

References (29)
  • 1
    • 33748678908 scopus 로고    scopus 로고
    • Effects of fixative type and fixation time on the detection of Maedi Visna virus by PCR and immunohistochemistry in paraffin-embedded ovine lung samples
    • Benavides J., García-Pariente C., Gelmetti D., Fuertes M., Ferreras M.C., García-Marín J.F., Pérez V. Effects of fixative type and fixation time on the detection of Maedi Visna virus by PCR and immunohistochemistry in paraffin-embedded ovine lung samples. J. Virol. Methods 2006, 137(2):317-324.
    • (2006) J. Virol. Methods , vol.137 , Issue.2 , pp. 317-324
    • Benavides, J.1    García-Pariente, C.2    Gelmetti, D.3    Fuertes, M.4    Ferreras, M.C.5    García-Marín, J.F.6    Pérez, V.7
  • 3
    • 84922793976 scopus 로고    scopus 로고
    • Ewing sarcoma mimicking atypical carcinoid tumor: detection of unexpected genomic alterations demonstrates the use of next generation sequencing as a diagnostic tool
    • Doyle L.A., Wong K.K., Bueno R., Dal Cin P., Fletcher J.A., Sholl L.M., Kuo F. Ewing sarcoma mimicking atypical carcinoid tumor: detection of unexpected genomic alterations demonstrates the use of next generation sequencing as a diagnostic tool. Cancer Genet. 2014, 207:335-339.
    • (2014) Cancer Genet. , vol.207 , pp. 335-339
    • Doyle, L.A.1    Wong, K.K.2    Bueno, R.3    Dal Cin, P.4    Fletcher, J.A.5    Sholl, L.M.6    Kuo, F.7
  • 6
    • 84904581830 scopus 로고    scopus 로고
    • Novel BCR-ABL1 fusion identified by targeted next-generation sequencing in a patient with an atypical myeloproliferative neoplasm
    • Frederick L., Beardell F., Viswanatha D.S. Novel BCR-ABL1 fusion identified by targeted next-generation sequencing in a patient with an atypical myeloproliferative neoplasm. Hum. Pathol. 2014, 45:1784-1789.
    • (2014) Hum. Pathol. , vol.45 , pp. 1784-1789
    • Frederick, L.1    Beardell, F.2    Viswanatha, D.S.3
  • 8
    • 0026099836 scopus 로고
    • PCR amplification from paraffin-embedded tissues. Effects of fixative and fixation time
    • Greer C.E., Peterson S.L., Kiviat N.B., Manos M.M. PCR amplification from paraffin-embedded tissues. Effects of fixative and fixation time. Am. J. Clin. Pathol. 1991, 95(2):117-124.
    • (1991) Am. J. Clin. Pathol. , vol.95 , Issue.2 , pp. 117-124
    • Greer, C.E.1    Peterson, S.L.2    Kiviat, N.B.3    Manos, M.M.4
  • 11
    • 0018040673 scopus 로고
    • Studies on histone organization in the nucleosome using formaldehyde as a reversible cross-linking agent
    • Jackson V. Studies on histone organization in the nucleosome using formaldehyde as a reversible cross-linking agent. Cell 1978, 15(3):945-954.
    • (1978) Cell , vol.15 , Issue.3 , pp. 945-954
    • Jackson, V.1
  • 13
    • 84897956943 scopus 로고    scopus 로고
    • Targeted next-generation sequencing using fine-needle aspirates from adenocarcinomas of the lung
    • Karnes H.E., Duncavage E.J., Bernadt C.T. Targeted next-generation sequencing using fine-needle aspirates from adenocarcinomas of the lung. Cancer Cytopathol. 2014, 122:104-113.
    • (2014) Cancer Cytopathol. , vol.122 , pp. 104-113
    • Karnes, H.E.1    Duncavage, E.J.2    Bernadt, C.T.3
  • 16
    • 84896739948 scopus 로고    scopus 로고
    • Single cell genomics: advances and future perspectives
    • Macaulay I.C., Voet T. Single cell genomics: advances and future perspectives. PLoS Genet. 2014, 10:e1004126.
    • (2014) PLoS Genet. , vol.10 , pp. e1004126
    • Macaulay, I.C.1    Voet, T.2
  • 19
    • 84894609875 scopus 로고    scopus 로고
    • Single-cell sequencing
    • Nawy T. Single-cell sequencing. Nat. Methods 2014, 11:18.
    • (2014) Nat. Methods , vol.11 , pp. 18
    • Nawy, T.1
  • 20
    • 84890409823 scopus 로고    scopus 로고
    • Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens
    • Pritchard C.C., Salipante S.J., Koehler K., Smith C., Scroggins S., Wood B., Wu D., Lee M.K., Dintzis S., Adey A., et al. Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens. J. Mol. Diagn.: JMD 2014, 16:56-67.
    • (2014) J. Mol. Diagn.: JMD , vol.16 , pp. 56-67
    • Pritchard, C.C.1    Salipante, S.J.2    Koehler, K.3    Smith, C.4    Scroggins, S.5    Wood, B.6    Wu, D.7    Lee, M.K.8    Dintzis, S.9    Adey, A.10
  • 21
    • 84904656411 scopus 로고    scopus 로고
    • Intratumoral heterogeneity, its contribution to therapy resistance and methodological caveats to assessment
    • Renovanz M., Kim E.L. Intratumoral heterogeneity, its contribution to therapy resistance and methodological caveats to assessment. Front. Oncol. 2014, 4:142.
    • (2014) Front. Oncol. , vol.4 , pp. 142
    • Renovanz, M.1    Kim, E.L.2
  • 25
    • 84892728434 scopus 로고    scopus 로고
    • Sequencing depth and coverage: key considerations in genomic analyses
    • Sims D., Sudbery I., Ilott N.E., Heger A., Ponting C.P. Sequencing depth and coverage: key considerations in genomic analyses. Nat. Rev. Genet. 2014, 15:121-132.
    • (2014) Nat. Rev. Genet. , vol.15 , pp. 121-132
    • Sims, D.1    Sudbery, I.2    Ilott, N.E.3    Heger, A.4    Ponting, C.P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.