A scoring model for phosphopeptide site localization and its impact on the question of whether to use MSA

Journal of Proteomics

Volumn 129, Issue , 2014, Pages 42-50

  Fischer, Juliana de S da G ^a   dos Santos, Marlon D M ^a   Marchini, Fabricio K ^a   Barbosa, Valmir C ^b   Carvalho, Paulo C ^a   Zanchin, Nilson I T ^a  

^a INSTITUTO OSWALDO CRUZ   (Brazil)

^b FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

Author keywords

HAP chromatography; Multistage activation (MSA); Phosphopeptide enrichment; Phosphoproteomics

Indexed keywords

HYDROXYAPATITE; ION; PHOSPHOPEPTIDE; PROTEIN BINDING; PROTEOME;

ALGORITHM; ARTICLE; CHROMATOGRAPHY; HUMAN; HUMAN CELL; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN PHOSPHORYLATION; PROTEOMICS; SCORING SYSTEM; TANDEM MASS SPECTROMETRY; AMINO ACID SEQUENCE; BINDING SITE; CHEMISTRY; COMPUTER SIMULATION; MASS SPECTROMETRY; MOLECULAR GENETICS; PHOSPHORYLATION; POSITION WEIGHT MATRIX; PROCEDURES; PROTEIN ANALYSIS; SEQUENCE ANALYSIS; STATISTICAL MODEL;

ALGORITHMS; AMINO ACID SEQUENCE; BINDING SITES; COMPUTER SIMULATION; MASS SPECTROMETRY; MODELS, STATISTICAL; MOLECULAR SEQUENCE DATA; PHOSPHOPEPTIDES; PHOSPHORYLATION; POSITION-SPECIFIC SCORING MATRICES; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; PROTEOME; SEQUENCE ANALYSIS, PROTEIN;

EID: 84945458991     PISSN: 18743919     EISSN: 18767737     Source Type: Journal    
DOI: 10.1016/j.jprot.2015.01.008     Document Type: Article

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