Human polyomavirus type six in respiratory samples from hospitalized children with respiratory tract infections in Beijing, China

Virology Journal

Volumn 12, Issue 1, 2015, Pages

  Zheng, Wen Zhi ^a   Wei, Tian Li ^b   Ma, Fen Lian ^a   Yuan, Wu Mei ^a   Zhang, Qian ^a   Zhang, Ya Xin ^b   Cui, Hong ^b   Zheng, Li Shu ^a  

^a BEIJING HOSPITAL   (China)

^b CAPITAL MEDICAL UNIVERSITY   (China)

Author keywords

Human polyomavirus type six; Nasopharyngeal aspirate specimen; Respiratory virus; TaqMan real time PCR

Indexed keywords

PROTEIN VP1; VIRUS DNA;

ADOLESCENT; ARTICLE; BRONCHITIS; BRONCHOPNEUMONIA; CHILD; CHINA; CLINICAL ARTICLE; COUGHING; FEMALE; FEVER; HOSPITAL PATIENT; HUMAN; HUMAN POLYOMAVIRUS TYPE SIX; HUMAN RESPIRATORY SYNCYTIAL VIRUS; INFANT; INFLUENZA A VIRUS; LOWER RESPIRATORY TRACT INFECTION; MALE; MIXED INFECTION; NASOPHARYNGEAL ASPIRATION; NEWBORN; PNEUMONIA; POLYOMAVIRUS; POLYOMAVIRUS INFECTION; PRESCHOOL CHILD; PREVALENCE; REAL TIME POLYMERASE CHAIN REACTION; SYMPTOM; UNITED STATES; VIRUS GENOME; VIRUS LOAD; VIRUS STRAIN; VP1 GENE; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; HOSPITALIZED CHILD; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NASOPHARYNX; ORTHOMYXOVIRIDAE; PHYLOGENY; POLYOMAVIRUS INFECTIONS; RESPIRATORY TRACT INFECTIONS; SEQUENCE HOMOLOGY; VIROLOGY;

ADOLESCENT; BEIJING; CHILD; CHILD, HOSPITALIZED; CHILD, PRESCHOOL; CLUSTER ANALYSIS; DNA, VIRAL; FEMALE; HUMANS; INFANT; INFANT, NEWBORN; MALE; MOLECULAR SEQUENCE DATA; NASOPHARYNX; ORTHOMYXOVIRIDAE; PHYLOGENY; POLYOMAVIRUS; POLYOMAVIRUS INFECTIONS; PREVALENCE; REAL-TIME POLYMERASE CHAIN REACTION; RESPIRATORY SYNCYTIAL VIRUSES; RESPIRATORY TRACT INFECTIONS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

EID: 84945237894     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/s12985-015-0390-5     Document Type: Article

References (36)

1. Van Ghelue M, Khan MT, Ehlers B, Moens U. Genome analysis of the new human polyomaviruses. Rev Med Virol. 2012;22:354-77.
2. Dalianis T, Hirsch HH. Human polyomaviruses in disease and cancer. Virology. 2013;437:63-72.
3. Padgett BL, Walker DL, ZuRhein GM, Eckroade RJ, Dessel BH. Cultivation of papova-like virus from human brain with progressive multifocal leucoencephalopathy. Lancet. 1971;1:1257-60.
4. Gardner SD, Field AM, Coleman DV, Hulme B. New human papovavirus (B.K.) isolated from urine after renal transplantation. Lancet. 1971;1:1253-7.
5. Gaynor AM, Nissen MD, Whiley DM, Mackay IM, Lambert SB, Wu G, et al. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog. 2007;3:e64.
6. Allander T, Andreasson K, Gupta S, Bjerkner A, Bogdanovic G, Persson MA, et al. Identification of a third human polyomavirus. J Virol. 2007;81:4130-6.
7. Feng H, Shuda M, Chang Y, Moore PS. Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science. 2008;319:1096-100.
8. Schowalter RM, Pastrana DV, Pumphrey K, Moyer AL, Buck CB. Merkel cell polyomavirus and two previously unknown polyomaviruses are chronically shed from human skin. Cell Host Microbe. 2010;7:509-15.
9. Van der Meijden E, Janssens RW, Lauber C, Bouwes Bavinck JN, Gorbalenya AE, Feltkamp MC. Discovery of a new human polyomavirus associated with trichodysplasia spinulosa in an immunocompromized patient. PLoS Pathog. 2010;6:e1001024.
10. Scuda N, Hofmann J, Calvignac-Spencer S, Ruprecht K, Liman P, Kuhn J, et al. A novel human polyomavirus closely related to the african green monkeyderived lymphotropic polyomavirus. J Virol. 2011;85:4586-90.
11. Buck CB, Phan GQ, Raiji MT, Murphy PM, McDermott DH, McBride AA. Complete genome sequence of a tenth human polyomavirus. J Virol. 2012;86:10887.
12. Yu G, Greninger AL, Isa P, Phan TG, Martínez MA, Sanchez M, et al. Discovery of a novel polyomavirus in acute diarrheal samples from children. PLoS One. 2012;7:e49449.
13. Siebrasse EA, Reyes A, Lim ES, Zhao G, Mkakosya RS, Manary MJ, et al. Identification of MW polyomavirus, a novel polyomavirus in human stool. J Virol. 2012;86:10321-6.
14. Lim ES, Reyes A, Antonio M, Saha D, Ikumapayi UN, Adeyemi M, et al. Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing. Virology. 2013;436:295-303.
15. Korup S, Rietscher J, Calvignac-Spencer S, Trusch F, Hofmann J, Moens U, et al. Identification of a novel human polyomavirus in organs of the gastrointestinal tract. PLoS. 2013;8:e58021.
16. Mishra N, Pereira M, Rhodes RH, An P, Pipas JM, Jain K, et al. Identification of a novel polyomavirus in a pancreatic transplant recipient with retinal blindness and vasculitic myopathy. J Infect Dis. 2014;10:1595-9.
17. Bogdanovic G, Priftakis P, Giraud G, Kuzniar M, Ferraldeschi R, Kokhaei P, et al. Association between a high BK virus load in urine samples of patients with graftversus-host disease and development of hemorrhagic cystitis after hematopoietic stem cell transplantation. J Clin Microbiol. 2004;42:5394-6.
18. Shishido-Hara Y. Progressive multifocal leukoencephalopathy and promyelocytic leukemia nuclear bodies: a review of clinical, neuropathological, and virological aspects of JC virus-induced demyelinating disease. Acta Neuropathol. 2010;120:403-17.
19. Shah KV. SV40 and human cancer: a review of recent data. Int J Cancer. 2007;120:215-23.
20. Kean JM, Rao S, Wang M, Garcea RL. Seroepidemiology of human polyomaviruses. PLoS Pathog. 2009;5:e1000363.
21. Bialasiewicz S, Whiley DM, Lambert SB, Jacob K, Bletchly C, Wang D, et al. Presence of the newly discovered human polyomaviruses KI and WU in Australian patients with acute respiratory tract infection. J Clin Virol. 2008;41:63-8.
22. Debiaggi M, Canducci F, Brerra R, Sampaolo M, Marinozzi MC, Parea M, et al. Molecular epidemiology of KI and WU polyomaviruses in infants with acute respiratory disease and in adult hematopoietic stem cell transplant recipients. J Med Virol. 2010;82:153-6.
23. Templeton KE, Scheltinga SA, Beersma MF, Kroes AC, Claas EC. Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza A and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4. J Clin Microbiol. 2004;42:1564-9.
24. McLeish NJ, Witteveldt J, Clasper L, McIntyre C, McWilliam Leitch EC, Hardie A, et al. Development and Assay of RNA Transcripts of Enterovirus Species A to D, Rhinovirus Species A to C, and Human Parechovirus:Assessment of Assay Sensitivity and Specificity of Real-Time Screening and Typing Methods. J Clin Microbiol. 2012;50:2910-7.
25. Kuypers J, Campbell AP, Guthrie KA, Wright NL, Englund JA, Lawrence C, et al. WU and KI polyomaviruses in respiratory samples from allogeneic hematopoietic cell transplant recipients. Emerg Infect Dis. 2012;18:1580-8.
26. Bialasiewicz S, Whiley DM, Lambert SB, Gould A, Nissen MD, Sloots TP. Development and evaluation of real-time PCR assays for the detection of the newly identified KI and WU polyomaviruses. J Clin Virol. 2007;40:9-14.
27. Kim JS, Lim CS, Kim YK, Lee KN, Lee CK. Human bocavirus in patients with respiratory tract infection. Korean J Lab Med. 2011;31:179-84.
28. Heim A, Ebnet C, Harste G, Pring-Akerblom P. Rapid and quantitative detection of human adenovirus DNA by real-time PCR. J Med Virol. 2003;70:228-39.
29. Maertzdorf J, Wang CK, Brown JB, Quinto JD, Chu M, de Graaf M, et al. Real-time reverse transcriptase PCR assay for detection of human metapneumoviruses from all known genetic lineages. J Clin Microbiol. 2004;42:981-6.
30. Ward CL, Dempsey MH, Ring CJ, Kempson RE, Zhang L, Gor D, et al. Design and performance testing of quantitative real time PCR assays for influenza A and B viral load measurement. J Clin Virol. 2004;29:179-88.
31. Esposito S, Bosis S, Niesters HG, Tremolati E, Begliatti E, Rognoni A, et al. Impact of human coronavirus infections in otherwise healthy children who attended an emergency department. J Med Virol. 2006;8:1609-15.
32. Antonsson A, Bialasiewicz S, Rockett RJ, Jacob K, Bennett IC, Sloots TP. Exploring the prevalence of ten polyomaviruses and two herpes viruses in breast cancer. Plos One. 2012;7:e39842.
33. Scola N, Wieland U, Silling S, Altmeyer P, Stücker M, Kreuter A. Prevalence of human polyomaviruses in common and rare types of non-Merkel cell carcinoma skin cancer. Br J Dermatol. 2012;167:1315-20.
34. Rockett RJ, Sloots TP, Bowes S, O'Neill N, Ye S, Robson J, et al. Detection of novel polyomaviruses, TSPyV, HPyV6, HPyV7, HPyV9 and MWPyV in feces, urine, blood, respiratory swabs and cerebrospinal fluid. PLoS One. 2013;8:e62764.
35. Siebrasse EA, Bauer I, Holtz LR, Le B-M, Lassa-Claxton S, Canter C, et al. Human polyomaviruses in children undergoing transplantation, United States, 2008-2010. Emerg Infect Dis. 2012;18:1676-9.
36. Schrama D, Buck CB, Houben R, Becker JC. No evidence for association of HPyV6 or HPyV7 with different skin cancers. J Invest Dermatol. 2012;132:239-41.