-
1
-
-
18744382506
-
ProtTest: selection of best-fit models of protein evolution
-
Abascal F, Zardoya R, Posada D. 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104-2105.
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
2
-
-
34247158281
-
Identification of a third human polyomavirus
-
Allander T, et al. 2007. Identification of a third human polyomavirus. J. Virol. 81:4130-4136.
-
(2007)
J. Virol.
, vol.81
, pp. 4130-4136
-
-
Allander, T.1
-
3
-
-
77952738983
-
Whole-genome characterization and genotyping of global WU polyomavirus strains
-
Bialasiewicz S, et al. 2010. Whole-genome characterization and genotyping of global WU polyomavirus strains. J. Virol. 84:6229-6234.
-
(2010)
J. Virol.
, vol.84
, pp. 6229-6234
-
-
Bialasiewicz, S.1
-
4
-
-
68049113509
-
Genomic mutations of viral protein 1 and BK virus nephropathy in kidney transplant recipients
-
Boldorini R, et al. 2009. Genomic mutations of viral protein 1 and BK virus nephropathy in kidney transplant recipients. J. Med. Virol. 81:1385-1393.
-
(2009)
J. Med. Virol.
, vol.81
, pp. 1385-1393
-
-
Boldorini, R.1
-
5
-
-
67049158348
-
Fast statistical alignment
-
doi:10.1371/journal.pcbi.1000392.
-
Bradley RK, et al. 2009. Fast statistical alignment. PLoS Comput. Biol. 5:e1000392. doi:10.1371/journal.pcbi.1000392.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Bradley, R.K.1
-
6
-
-
26444433210
-
Complete nucleotide sequence of polyomavirus SA12
-
Cantalupo P, et al. 2005. Complete nucleotide sequence of polyomavirus SA12. J. Virol. 79:13094-13104.
-
(2005)
J. Virol.
, vol.79
, pp. 13094-13104
-
-
Cantalupo, P.1
-
7
-
-
80455127052
-
Raw sewage harbors diverse viral populations
-
doi:10.1128/mBio.00180-11.
-
Cantalupo PG, et al. 2011. Raw sewage harbors diverse viral populations. mBio 2(5):e00180-12. doi:10.1128/mBio.00180-11.
-
(2011)
mBio
, vol.2
, Issue.5
-
-
Cantalupo, P.G.1
-
8
-
-
77954941432
-
Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma
-
Colegrove KM, et al. 2010. Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma. J. Vet. Diagn. Invest. 22:628-632.
-
(2010)
J. Vet. Diagn. Invest.
, vol.22
, pp. 628-632
-
-
Colegrove, K.M.1
-
10
-
-
78649315637
-
Detection and characterization of two chimpanzee polyomavirus genotypes from different subspecies
-
Deuzing I, et al. 2010. Detection and characterization of two chimpanzee polyomavirus genotypes from different subspecies. Virol. J. 7:347.
-
(2010)
Virol. J.
, vol.7
, pp. 347
-
-
Deuzing, I.1
-
11
-
-
39749113080
-
Clonal integration of a polyomavirus in human Merkel cell carcinoma
-
Feng H, Shuda M, Chang Y, Moore PS. 2008. Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science 319:1096-1100.
-
(2008)
Science
, vol.319
, pp. 1096-1100
-
-
Feng, H.1
Shuda, M.2
Chang, Y.3
Moore, P.S.4
-
13
-
-
34249650137
-
Identification of a novel polyomavirus from patients with acute respiratory tract infections
-
doi:10.1371/journal.ppat.0030064.
-
Gaynor AM, et al. 2007. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog. 3:e64. doi:10.1371/journal.ppat.0030064.
-
(2007)
PLoS Pathog.
, vol.3
-
-
Gaynor, A.M.1
-
14
-
-
77954638804
-
Update on human polyomaviruses and cancer
-
Gjoerup O, Chang Y. 2010. Update on human polyomaviruses and cancer. Adv. Cancer Res. 106:1-51.
-
(2010)
Adv. Cancer Res.
, vol.106
, pp. 1-51
-
-
Gjoerup, O.1
Chang, Y.2
-
15
-
-
0036133044
-
AliBaba2: context specific identification of transcription factor binding sites
-
Grabe N. 2002. AliBaba2: context specific identification of transcription factor binding sites. In Silico Biol. 2:S1-S15.
-
(2002)
In Silico Biol.
, vol.2
-
-
Grabe, N.1
-
17
-
-
76849112731
-
Characterization of novel polyomaviruses from Bornean and Sumatran orang-utans
-
Groenewoud MJ, et al. 2010. Characterization of novel polyomaviruses from Bornean and Sumatran orang-utans. J. Gen. Virol. 91:653-658.
-
(2010)
J. Gen. Virol.
, vol.91
, pp. 653-658
-
-
Groenewoud, M.J.1
-
18
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.
-
Guindon S, et al. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst. Biol. 59:307-321.
-
(2010)
Syst. Biol.
, vol.59
, pp. 307-321
-
-
Guindon, S.1
-
19
-
-
78650050460
-
Whole-genome characterization of a novel polyomavirus detected in fatally diseased canary birds
-
Halami MY, et al. 2010. Whole-genome characterization of a novel polyomavirus detected in fatally diseased canary birds. J. Gen. Virol. 91:3016-3022.
-
(2010)
J. Gen. Virol.
, vol.91
, pp. 3016-3022
-
-
Halami, M.Y.1
-
20
-
-
84869073023
-
-
In Knipe DM, Howley PM (ed), Fields virology, 5th ed, Lippincott Williams & Wilkins, Philadelphia, PA.
-
Imperiale MJ, Major EO. 2007. Polyomaviruses. In Knipe DM, Howley PM (ed), Fields virology, 5th ed, vol 2. Lippincott Williams & Wilkins, Philadelphia, PA.
-
(2007)
Polyomaviruses
, vol.2
-
-
Imperiale, M.J.1
Major, E.O.2
-
21
-
-
80052273419
-
Taxonomical developments in the family Polyomaviridae
-
Johne R, et al. 2011. Taxonomical developments in the family Polyomaviridae. Arch. Virol. 156:1627-1634.
-
(2011)
Arch. Virol.
, vol.156
, pp. 1627-1634
-
-
Johne, R.1
-
22
-
-
0037431209
-
The genome of goose hemorrhagic polyomavirus, a new member of the proposed subgenus Avipolyomavirus
-
Johne R, Muller H. 2003. The genome of goose hemorrhagic polyomavirus, a new member of the proposed subgenus Avipolyomavirus. Virology 308:291-302.
-
(2003)
Virology
, vol.308
, pp. 291-302
-
-
Johne, R.1
Muller, H.2
-
23
-
-
33645309119
-
Characterization of two novel polyomaviruses of birds by using multiply primed rolling-circle amplification of their genomes
-
Johne R, Wittig W, Fernandez-de-Luco D, Hofle U, Muller H. 2006. Characterization of two novel polyomaviruses of birds by using multiply primed rolling-circle amplification of their genomes. J. Virol. 80:3523-3531.
-
(2006)
J. Virol.
, vol.80
, pp. 3523-3531
-
-
Johne, R.1
Wittig, W.2
Fernandez-de-Luco, D.3
Hofle, U.4
Muller, H.5
-
24
-
-
84856967404
-
Trichodysplasia spinulosa is characterized by active polyomavirus infection
-
Kazem S, et al. 2012. Trichodysplasia spinulosa is characterized by active polyomavirus infection. J. Clin. Virol. 53:225-230.
-
(2012)
J. Clin. Virol.
, vol.53
, pp. 225-230
-
-
Kazem, S.1
-
25
-
-
33745630722
-
Discovery and epidemiology of the human polyomaviruses BK virus (BKV) and JC virus (JCV)
-
Knowles WA. 2006. Discovery and epidemiology of the human polyomaviruses BK virus (BKV) and JC virus (JCV). Adv. Exp. Med. Biol. 577:19-45.
-
(2006)
Adv. Exp. Med. Biol.
, vol.577
, pp. 19-45
-
-
Knowles, W.A.1
-
26
-
-
67651124826
-
Phylogenetics, evolution, and medical importance of polyomaviruses
-
Krumbholz A, Bininda-Emonds OR, Wutzler P, Zell R. 2009. Phylogenetics, evolution, and medical importance of polyomaviruses. Infect. Genet. Evol. 9:784-799.
-
(2009)
Infect. Genet. Evol.
, vol.9
, pp. 784-799
-
-
Krumbholz, A.1
Bininda-Emonds, O.R.2
Wutzler, P.3
Zell, R.4
-
27
-
-
0018618720
-
Organization and transcription of the simian virus 40 genome
-
Lebowitz P, Weissman SM. 1979. Organization and transcription of the simian virus 40 genome. Curr. Top. Microbiol. Immunol. 87:43-172.
-
(1979)
Curr. Top. Microbiol. Immunol.
, vol.87
, pp. 43-172
-
-
Lebowitz, P.1
Weissman, S.M.2
-
28
-
-
78650672089
-
African great apes are naturally infected with polyomaviruses closely related to Merkel cell polyomavirus
-
Leendertz FH, et al. 2011. African great apes are naturally infected with polyomaviruses closely related to Merkel cell polyomavirus. J. Virol. 85: 916-924.
-
(2011)
J. Virol.
, vol.85
, pp. 916-924
-
-
Leendertz, F.H.1
-
29
-
-
84857938180
-
Stimulation of BK virus DNA replication by NFI family transcription factors
-
Liang B, Tikhanovich I, Nasheuer HP, Folk WR. 2012. Stimulation of BK virus DNA replication by NFI family transcription factors. J. Virol. 86:3264-3275.
-
(2012)
J. Virol.
, vol.86
, pp. 3264-3275
-
-
Liang, B.1
Tikhanovich, I.2
Nasheuer, H.P.3
Folk, W.R.4
-
30
-
-
78651285748
-
CDD: a conserved domain database for the functional annotation of proteins
-
Marchler-Bauer A, et al. 2011. CDD: a conserved domain database for the functional annotation of proteins. Nucleic Acids Res. 39:D225-D229.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Marchler-Bauer, A.1
-
31
-
-
0025726223
-
Nucleotide sequence and genome organization of the murine polyomavirus, Kilham strain
-
Mayer M, Dorries K. 1991. Nucleotide sequence and genome organization of the murine polyomavirus, Kilham strain. Virology 181:469-480.
-
(1991)
Virology
, vol.181
, pp. 469-480
-
-
Mayer, M.1
Dorries, K.2
-
32
-
-
69449103776
-
Detection of polyoma and corona viruses in bats of Canada
-
Misra V, et al. 2009. Detection of polyoma and corona viruses in bats of Canada. J. Gen. Virol. 90:2015-2022.
-
(2009)
J. Gen. Virol.
, vol.90
, pp. 2015-2022
-
-
Misra, V.1
-
33
-
-
79955752759
-
Detection and characterization of a novel polyomavirus in wild rodents
-
Orba Y, et al. 2011. Detection and characterization of a novel polyomavirus in wild rodents. J. Gen. Virol. 92:789-795.
-
(2011)
J. Gen. Virol.
, vol.92
, pp. 789-795
-
-
Orba, Y.1
-
34
-
-
0021943624
-
Complete DNA sequence of lymphotropic papovavirus: prototype of a new species of the polyomavirus genus
-
Pawlita M, Clad A, zur Hausen H. 1985. Complete DNA sequence of lymphotropic papovavirus: prototype of a new species of the polyomavirus genus. Virology 143:196-211.
-
(1985)
Virology
, vol.143
, pp. 196-211
-
-
Pawlita, M.1
Clad, A.2
zur Hausen, H.3
-
35
-
-
0026692874
-
Common and unique features of T antigens encoded by the polyomavirus group
-
Pipas JM. 1992. Common and unique features of T antigens encoded by the polyomavirus group. J. Virol. 66:3979-3985.
-
(1992)
J. Virol.
, vol.66
, pp. 3979-3985
-
-
Pipas, J.M.1
-
36
-
-
33745585598
-
The pathobiology of polyomavirus infection in man
-
Randhawa P, Vats A, Shapiro R. 2006. The pathobiology of polyomavirus infection in man. Adv. Exp. Med. Biol. 577:148-159.
-
(2006)
Adv. Exp. Med. Biol.
, vol.577
, pp. 148-159
-
-
Randhawa, P.1
Vats, A.2
Shapiro, R.3
-
37
-
-
77954627922
-
Viruses in the faecal microbiota of monozygotic twins and their mothers
-
Reyes A, et al. 2010. Viruses in the faecal microbiota of monozygotic twins and their mothers. Nature 466:334-338.
-
(2010)
Nature
, vol.466
, pp. 334-338
-
-
Reyes, A.1
-
38
-
-
0034201441
-
EMBOSS: the European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A. 2000. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16:276-277.
-
(2000)
Trends Genet.
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
39
-
-
0024043681
-
The genome of budgerigar fledgling disease virus, an avian polyomavirus
-
Rott O, Kroger M, Muller H, Hobom G. 1988. The genome of budgerigar fledgling disease virus, an avian polyomavirus. Virology 165:74-86.
-
(1988)
Virology
, vol.165
, pp. 74-86
-
-
Rott, O.1
Kroger, M.2
Muller, H.3
Hobom, G.4
-
40
-
-
77956506650
-
Merkel cell polyomavirus and two previously unknown polyomaviruses are chronically shed from human skin
-
Schowalter RM, Pastrana DV, Pumphrey KA, Moyer AL, Buck CB. 2010. Merkel cell polyomavirus and two previously unknown polyomaviruses are chronically shed from human skin. Cell Host Microbe 7:509-515.
-
(2010)
Cell Host Microbe
, vol.7
, pp. 509-515
-
-
Schowalter, R.M.1
Pastrana, D.V.2
Pumphrey, K.A.3
Moyer, A.L.4
Buck, C.B.5
-
41
-
-
0025024891
-
The complete nucleotide sequence of bovine polyomavirus
-
Schuurman R, Sol C, van der Noordaa J. 1990. The complete nucleotide sequence of bovine polyomavirus. J. Gen. Virol. 71(Pt 8):1723-1735.
-
(1990)
J. Gen. Virol.
, vol.71
, Issue.PART 8
, pp. 1723-1735
-
-
Schuurman, R.1
Sol, C.2
van der Noordaa, J.3
-
42
-
-
79955429137
-
A novel human polyomavirus closely related to the African green monkey-derived lymphotropic polyomavirus
-
Scuda N, et al. 2011. A novel human polyomavirus closely related to the African green monkey-derived lymphotropic polyomavirus. J. Virol. 85: 4586-4590.
-
(2011)
J. Virol.
, vol.85
, pp. 4586-4590
-
-
Scuda, N.1
-
43
-
-
0018611461
-
The genome of human papovavirus BKV
-
Seif I, Khoury G, Dhar R. 1979. The genome of human papovavirus BKV. Cell 18:963-977.
-
(1979)
Cell
, vol.18
, pp. 963-977
-
-
Seif, I.1
Khoury, G.2
Dhar, R.3
-
44
-
-
61449209921
-
Adaptive mutations in the JC virus protein capsid are associated with progressive multifocal leukoencephalopathy (PML)
-
doi:10.1371/journal.pgen.1000368.
-
Sunyaev SR, Lugovskoy A, Simon K, Gorelik L. 2009. Adaptive mutations in the JC virus protein capsid are associated with progressive multifocal leukoencephalopathy (PML). PLoS Genet. 5:e1000368. doi:10.1371/journal.pgen.1000368.
-
(2009)
PLoS Genet.
, vol.5
-
-
Sunyaev, S.R.1
Lugovskoy, A.2
Simon, K.3
Gorelik, L.4
-
45
-
-
77957666032
-
Discovery of a new human polyomavirus associated with trichodysplasia spinulosa in an immunocompromized patient
-
doi:10.1371/journal.ppat.1001024.
-
van der Meijden E, et al. 2010. Discovery of a new human polyomavirus associated with trichodysplasia spinulosa in an immunocompromized patient. PLoS Pathog. 6:e1001024. doi:10.1371/journal.ppat.1001024.
-
(2010)
PLoS Pathog.
, vol.6
-
-
van der Meijden, E.1
-
46
-
-
38349054005
-
Molecular characterization of the first polyomavirus from a New World primate: squirrel monkey polyomavirus
-
Verschoor EJ, et al. 2008. Molecular characterization of the first polyomavirus from a New World primate: squirrel monkey polyomavirus. J.Gen. Virol. 89:130-137.
-
(2008)
J.Gen. Virol.
, vol.89
, pp. 130-137
-
-
Verschoor, E.J.1
-
47
-
-
79956291769
-
Characterization of California sea lion polyomavirus 1: expansion of the known host range of the Polyomaviridae to Carnivora
-
Wellehan JF, Jr, et al. 2011. Characterization of California sea lion polyomavirus 1: expansion of the known host range of the Polyomaviridae to Carnivora. Infect. Genet. Evol. 11:987-996.
-
(2011)
Infect. Genet. Evol.
, vol.11
, pp. 987-996
-
-
Wellehan Jr., J.F.1
-
48
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
9 May 2012
-
Yatsunenko T, et al. 9 May 2012. Human gut microbiome viewed across age and geography. Nature 486:222-227.
-
(2012)
Nature
, vol.486
, pp. 222-227
-
-
Yatsunenko, T.1
|