Characterization of archaeal community in Luzhou-flavour pit mud

Journal of the Institute of Brewing

Volumn 121, Issue 4, 2015, Pages 597-602

  Wu, Chongde ^a   Ding, Xiaofei ^a   Huang, Jun ^a   Zhou, Rongqing ^a,b  

^a SICHUAN UNIVERSITY   (China)

^b National Engineering Research Center of Solid State Brewing   (China)

Author keywords

FISH; Methanogenic archaea; Microbial community; PCR DGGE; Pit mud

Indexed keywords

ELECTROPHORESIS; FISH; FLUORESCENCE MICROSCOPY; MICROORGANISMS; RNA;

16S RRNA GENE SEQUENCE; FLUORESCENCE IN SITU HYBRIDIZATION; METHANOGENIC ARCHAEA; METHANOMICROBIALES (MMB); MICROBIAL COMMUNITIES; PCR-DGGE; PIT MUD; POLYMERASE CHAIN REACTION-DENATURING GRADIENT GEL ELECTROPHORESES (PCR-DGGE);

POLYMERASE CHAIN REACTION;

EID: 84944441434     PISSN: 00469750     EISSN: 20500416     Source Type: Journal    
DOI: 10.1002/jib.255     Document Type: Article

References (25)

1. Zheng, J., Zhang, L., Shen, C., Zhang, S., Jin, Y., Zhao, J., and Zhou, R. (2011) Characteristics of microbial community structure in Luzhou-flavor fermentation pits, Chin. J. Appl. Ecol. 22, 1020-1026.
2. Wu, Y., Xue, T., Chen, Z., Lu, S., Liu, A., Lin, S., Tang, W., Tang, H., and Zhao, X. (1991) Study on distribution and action of anaerobic bacteria in Wuliangye old fermented-pits, Acta Microbiol. Sinica 31, 299-307.
3. Yue, Y., Zhang, W., Liu, X., Hu, C., and Zhang, S. (2007) Isolation and identification of facultative anaerobes in the pit mud of Chinese Luzhou-flavor liquor, Microbiol China 34, 251-255.
4. Zhao, J., Zheng, J., Zhou, R., and Shi, B. (2012) Microbial community structure of pit mud in a Chinese strong aromatic liquor fermentation pit, J. Inst. Brew. 118, 356-360.
5. Liu, G., Zhao, Y., and Wu, Y. (1987) Isolation and characterization of Methanobacterium bryantii of Luzhou-liquor pit mud, Microbiol China 14, 156-159.
6. Wang, L., Zhang, L., Liu, L., Zhang, S., Xu, D., and Liu, G. (2010) Comparative study of two Methanobacterium strains in the ancient fermentation pits of Luzhou, Chin. J. Appl. Environ. Biol. 16, 1043-1048.
7. Wu, Y., Liu, S., Liu, G., Xue, T., Hou, M., and Jiang, Y. (1990) A study of enhancing the quality of Luzhou type Qujiu by using simultaneous fermentation of caproic acid bacteria and methane bacteria, Food Ferment Ind. 6, 1-6.
8. Wang, M., Zhang, W., Wang, H., and Liu, C. (2012) Phylogenetic diversity analysis of archaea in the pit mud with different cellar age, Chin. J. Appl. Environ. Biol. 18, 1043-1048.
9. Muyzer, G., and Smalla, K. (1998) Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology, Ant. van Leeuwen. 73, 127-141.
10. Karakashev, D., Batstone, D. J., and Angelidaki, I. (2005) Influence of environmental conditions on methanogenic compositions in anaerobic biogas reactors, Appl. Environ. Microb. 71, 331-338.
11. Xia, Y., Massé, D. I., McAllister, T. A., Kong, Y., Seviour, R., and Beaulieu, C. (2012) Identity and diversity of archaeal communities during anaerobic co-digestion of chicken feathers and other animal wastes, Bioresource Technol. 110, 111-119.
12. Zheng, J., Liang, R., Zhang, L., Wu, C., Zhou, R., and Liao, X. (2013) Characterization of microbial communities in strong aromatic liquor fermentation pit muds of different ages assessed by combined DGGE and PLFA analyses, Food Res. Int. 54, 660-666.
13. Sekiguchi, Y., Kamagata, Y., Nakamura, K., Ohashi, A., and Harada, H. (1999) Fluorescence in situ hybridization using 16S rRNA-targeted oligonucleotides reveals localization of methanogens and selected uncultured bacteria in mesophilic and thermophilic sludge granules, Appl. Environ. Microb. 65, 1280-1288.
14. He, C., Wu, D., Zheng, J., Wu, C., and Zhou, R. (2013) Investigation on bacterial and archaea communities in fermentation pits of Luzhou-flavor liquor as pit age goes by, Liquor-Making Sci Technol. 223, 27-38.
15. Ding, X. F., Wu, C. D., Zhang, L. Q., Zheng, J., and Zhou, R. Q. (2014) Characterization of eubacterial and archaeal community diversity in the pit mud of Chinese Luzhou-flavor liquor by nested PCR-DGGE, World J. Microbiol. Biotechnol. 30, 605-612.
16. 2 reduction by methanogens, FEMS Microbiol. Lett. 44, 323-328.
17. Wagner, M., Horn, M., and Daims, H. (2003) Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes, Curr. Opin. Microbiol. 6, 302-309.
18. Fredriksson, N. J., Hermansson, M., and Wilén, B.-M. (2012) Diversity and dynamics of archaea in an activated sludge wastewater treatment plant, BMC Microbiol. 12, 140.
19. Chen, A., Ueda, K., Sekiguchi, Y., Ohashi, A., and Harada, H. (2003) Molecular detection and direct enumeration of methanogenic archaea and methanotrophic Bacteria in domestic solid waste landfill soils, Biotechnol. Lett. 25, 1563-1569.
20. Watanabe, T., Kimura, M., and Asakawa, S. (2007) Dynamics of methanogenic archaeal communities based on rRNA analysis and their relation to methanogenic activity in Japanese paddy field soils, Soil Biol Biochem. 39, 2877-2887.
21. De Vrieze, J., Hennebel, T., Boon, N., and Verstraete, W. (2012) Methanosarcina: The rediscovered methanogen for heavy duty biomethanation, Bioresource Technol. 112, 1-9.
22. Jupraputtasri, W., Boonapatcharoen, N., Cheevadhanarak, S., Chaiprasert, P., Tanticharoen, M., and Techkarnjanaruk, S. (2005) Use of an alternative archaea-specific probe for methanogen detection, J. Microbiol. Meth. 61, 95-104.
23. Crocetti, G., Murto, M., and Björnsson, L. (2006) An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH), J. Microbiol. Meth. 65, 194-201.
24. Ovreås, L., Forney, L., Daae, F. L., and Torsvik, V. (1997) Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA, Appl. Environ. Microb. 63, 3367-3373.
25. Zhong, W., Cai, Z., Yin, L., and Zhang, H. (2007) The effects of the long-term application of inorganic fertilizers on microbial community diversity in rice-planting red soil as studied by using PCR-DGGE, Acta Ecologica Sinica 27, 4011-4018.