-
1
-
-
0035028317
-
Non-photochemical quenching: A response to excess light energy
-
Müller P, Li XP, Niyogi KK (2001) Non-photochemical quenching: A response to excess light energy. Plant Physiol 125(4):1558-1566.
-
(2001)
Plant Physiol
, vol.125
, Issue.4
, pp. 1558-1566
-
-
Müller, P.1
Li, X.P.2
Niyogi, K.K.3
-
2
-
-
21844453924
-
Molecular basis of photoprotection and control of photosynthetic light-harvesting
-
Pascal AA, et al. (2005) Molecular basis of photoprotection and control of photosynthetic light-harvesting. Nature 436(7047):134-137.
-
(2005)
Nature
, vol.436
, Issue.7047
, pp. 134-137
-
-
Pascal, A.A.1
-
3
-
-
84878984467
-
Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis
-
Niyogi KK, Truong TB (2013) Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis. Curr Opin Plant Biol 16(3):307-314.
-
(2013)
Curr Opin Plant Biol
, vol.16
, Issue.3
, pp. 307-314
-
-
Niyogi, K.K.1
Truong, T.B.2
-
4
-
-
0037226278
-
The crystal structure of a cyanobacterial water-soluble carotenoid binding protein
-
Kerfeld CA, et al. (2003) The crystal structure of a cyanobacterial water-soluble carotenoid binding protein. Structure 11(1):55-65.
-
(2003)
Structure
, vol.11
, Issue.1
, pp. 55-65
-
-
Kerfeld, C.A.1
-
5
-
-
77953313030
-
Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria
-
Wilson A, et al. (2010) Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria. J Biol Chem 285(24):18364-18375.
-
(2010)
J Biol Chem
, vol.285
, Issue.24
, pp. 18364-18375
-
-
Wilson, A.1
-
6
-
-
84896893249
-
Structural and functional modularity of the orange carotenoid protein: Distinct roles for the N- and C-terminal domains in cyanobacterial photoprotection
-
Leverenz RL, et al. (2014) Structural and functional modularity of the orange carotenoid protein: Distinct roles for the N- and C-terminal domains in cyanobacterial photoprotection. Plant Cell 26(1):426-437.
-
(2014)
Plant Cell
, vol.26
, Issue.1
, pp. 426-437
-
-
Leverenz, R.L.1
-
7
-
-
50149083653
-
A photoactive carotenoid protein acting as light intensity sensor
-
Wilson A, et al. (2008) A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci USA 105(33):12075-12080.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.33
, pp. 12075-12080
-
-
Wilson, A.1
-
8
-
-
84878986302
-
Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria
-
Sutter M, et al. (2013) Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria. Proc Natl Acad Sci USA 110(24):10022-10027.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, Issue.24
, pp. 10022-10027
-
-
Sutter, M.1
-
9
-
-
84933564631
-
A 12 Å carotenoid translocation in a photoswitch associated with cyanobacterial photoprotection
-
Leverenz RL, et al. (2015) A 12 Å carotenoid translocation in a photoswitch associated with cyanobacterial photoprotection. Science 348(6242):1463-1466.
-
(2015)
Science
, vol.348
, Issue.6242
, pp. 1463-1466
-
-
Leverenz, R.L.1
-
10
-
-
84880237267
-
The Orange Carotenoid Protein: A blue-green light photoactive protein
-
Kirilovsky D, Kerfeld CA (2013) The Orange Carotenoid Protein: A blue-green light photoactive protein. Photochem Photobiol Sci 12(7):1135-1143.
-
(2013)
Photochem Photobiol Sci
, vol.12
, Issue.7
, pp. 1135-1143
-
-
Kirilovsky, D.1
Kerfeld, C.A.2
-
11
-
-
84908218510
-
Mass spectrometry footprinting reveals the structural rearrangements of cyanobacterial orange carotenoid protein upon light activation
-
Liu H, et al. (2014) Mass spectrometry footprinting reveals the structural rearrangements of cyanobacterial orange carotenoid protein upon light activation. Biochim Biophys Acta 1837(12):1955-1963.
-
(2014)
Biochim Biophys Acta
, vol.1837
, Issue.12
, pp. 1955-1963
-
-
Liu, H.1
-
12
-
-
84863098670
-
The essential role of the N-terminal domain of the orange carotenoid protein in cyanobacterial photoprotection: Importance of a positive charge for phycobilisome binding
-
Wilson A, et al. (2012) The essential role of the N-terminal domain of the orange carotenoid protein in cyanobacterial photoprotection: Importance of a positive charge for phycobilisome binding. Plant Cell 24(5):1972-1983.
-
(2012)
Plant Cell
, vol.24
, Issue.5
, pp. 1972-1983
-
-
Wilson, A.1
-
13
-
-
34548337296
-
Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
-
Xu G, Chance MR (2007) Hydroxyl radical-mediated modification of proteins as probes for structural proteomics. Chem Rev 107(8):3514-3543.
-
(2007)
Chem Rev
, vol.107
, Issue.8
, pp. 3514-3543
-
-
Xu, G.1
Chance, M.R.2
-
14
-
-
79951887389
-
Hydrogen exchange mass spectrometry for studying protein structure and dynamics
-
Konermann L, Pan J, Liu YH (2011) Hydrogen exchange mass spectrometry for studying protein structure and dynamics. Chem Soc Rev 40(3):1224-1234.
-
(2011)
Chem Soc Rev
, vol.40
, Issue.3
, pp. 1224-1234
-
-
Konermann, L.1
Pan, J.2
Liu, Y.H.3
-
15
-
-
77953480345
-
Hydrogen exchange mass spectrometry: What is it and what can it tell us?
-
Marcsisin SR, Engen JR (2010) Hydrogen exchange mass spectrometry: What is it and what can it tell us? Anal Bioanal Chem 397(3):967-972.
-
(2010)
Anal Bioanal Chem
, vol.397
, Issue.3
, pp. 967-972
-
-
Marcsisin, S.R.1
Engen, J.R.2
-
16
-
-
37149049312
-
X-ray solution scattering (SAXS) combined with crystallography and computation: Defining accurate macromolecular structures, conformations and assemblies in solution
-
Putnam CD, Hammel M, Hura GL, Tainer JA (2007) X-ray solution scattering (SAXS) combined with crystallography and computation: Defining accurate macromolecular structures, conformations and assemblies in solution. Q Rev Biophys 40(3):191-285.
-
(2007)
Q Rev Biophys
, vol.40
, Issue.3
, pp. 191-285
-
-
Putnam, C.D.1
Hammel, M.2
Hura, G.L.3
Tainer, J.A.4
-
17
-
-
0034672325
-
Estimation of protein secondary structure from circular dichroism spectra: Comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set
-
Sreerama N, Woody RW (2000) Estimation of protein secondary structure from circular dichroism spectra: Comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set. Anal Biochem 287(2):252-260.
-
(2000)
Anal Biochem
, vol.287
, Issue.2
, pp. 252-260
-
-
Sreerama, N.1
Woody, R.W.2
-
18
-
-
84892581204
-
Molecular mechanism of photoactivation and structural location of the cyanobacterial orange carotenoid protein
-
Zhang H, et al. (2014) Molecular mechanism of photoactivation and structural location of the cyanobacterial orange carotenoid protein. Biochemistry 53(1):13-19.
-
(2014)
Biochemistry
, vol.53
, Issue.1
, pp. 13-19
-
-
Zhang, H.1
-
19
-
-
75649147383
-
The molecular weight of proteins in solution can be determined from a single SAXS measurement on a relative scale
-
Fischer H, De Oliveira Neto M, Napolitano HB, Craievich AF, Polikarpov I (2010) The molecular weight of proteins in solution can be determined from a single SAXS measurement on a relative scale. J Appl Cryst 43:101-109.
-
(2010)
J Appl Cryst
, vol.43
, pp. 101-109
-
-
Fischer, H.1
De Oliveira Neto, M.2
Napolitano, H.B.3
Craievich, A.F.4
Polikarpov, I.5
-
20
-
-
0035010533
-
Determination of domain structure of proteins from X-ray solution scattering
-
Svergun DI, Petoukhov MV, Koch MH (2001) Determination of domain structure of proteins from X-ray solution scattering. Biophys J 80(6):2946-2953.
-
(2001)
Biophys J
, vol.80
, Issue.6
, pp. 2946-2953
-
-
Svergun, D.I.1
Petoukhov, M.V.2
Koch, M.H.3
-
21
-
-
0033001996
-
Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing
-
Svergun DI (1999) Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing. Biophys J 76(6):2879-2886.
-
(1999)
Biophys J
, vol.76
, Issue.6
, pp. 2879-2886
-
-
Svergun, D.I.1
-
22
-
-
84859782518
-
New developments in the ATSAS program package for small-angle scattering data analysis
-
Petoukhov MV, et al. (2012) New developments in the ATSAS program package for small-angle scattering data analysis. J Appl Cryst 45(Pt 2):342-350.
-
(2012)
J Appl Cryst
, vol.45
, pp. 342-350
-
-
Petoukhov, M.V.1
-
23
-
-
84866280220
-
Structure and dynamics of protein waters revealed by radiolysis and mass spectrometry
-
Gupta S, D'Mello R, Chance MR (2012) Structure and dynamics of protein waters revealed by radiolysis and mass spectrometry. Proc Natl Acad Sci USA 109(37):14882-14887.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.37
, pp. 14882-14887
-
-
Gupta, S.1
D'Mello, R.2
Chance, M.R.3
-
24
-
-
84940911120
-
Regulation of Orange Carotenoid Protein activity in cyanobacterial photoprotection
-
Thurotte A, et al. (2015) Regulation of Orange Carotenoid Protein activity in cyanobacterial photoprotection. Plant Physiol 169(1):737-747.
-
(2015)
Plant Physiol
, vol.169
, Issue.1
, pp. 737-747
-
-
Thurotte, A.1
-
25
-
-
78650901467
-
Tripping the light fantastic: Blue-light photoreceptors as examples of environmentally modulated protein-protein interactions
-
Zoltowski BD, Gardner KH (2011) Tripping the light fantastic: Blue-light photoreceptors as examples of environmentally modulated protein-protein interactions. Biochemistry 50(1):4-16.
-
(2011)
Biochemistry
, vol.50
, Issue.1
, pp. 4-16
-
-
Zoltowski, B.D.1
Gardner, K.H.2
-
26
-
-
84905577487
-
Visualizing the kinetic power stroke that drives proton-coupled zinc (II) transport
-
Gupta S, et al. (2014) Visualizing the kinetic power stroke that drives proton-coupled zinc (II) transport. Nature 512(7512):101-104.
-
(2014)
Nature
, vol.512
, Issue.7512
, pp. 101-104
-
-
Gupta, S.1
-
27
-
-
84886933840
-
Water networks contribute to enthalpy/entropy compensation in protein-ligand binding
-
Breiten B, et al. (2013) Water networks contribute to enthalpy/entropy compensation in protein-ligand binding. J Am Chem Soc 135(41):15579-15584.
-
(2013)
J Am Chem Soc
, vol.135
, Issue.41
, pp. 15579-15584
-
-
Breiten, B.1
-
28
-
-
0028014642
-
Bound water molecules and conformational stabilization help mediate an antigen-antibody association
-
Bhat TN, et al. (1994) Bound water molecules and conformational stabilization help mediate an antigen-antibody association. Proc Natl Acad Sci USA 91(3):1089-1093.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, Issue.3
, pp. 1089-1093
-
-
Bhat, T.N.1
-
29
-
-
38849196324
-
Water as an active constituent in cell biology
-
Ball P (2008) Water as an active constituent in cell biology. Chem Rev 108(1):74-108.
-
(2008)
Chem Rev
, vol.108
, Issue.1
, pp. 74-108
-
-
Ball, P.1
-
30
-
-
84903614620
-
Development of a microsecond X-ray protein footprinting facility at the Advanced Light Source
-
Gupta S, Celestre R, Petzold CJ, Chance MR, Ralston C (2014) Development of a microsecond X-ray protein footprinting facility at the Advanced Light Source. J Synchrotron Radiat 21(Pt 4):690-699.
-
(2014)
J Synchrotron Radiat
, vol.21
, pp. 690-699
-
-
Gupta, S.1
Celestre, R.2
Petzold, C.J.3
Chance, M.R.4
Ralston, C.5
-
31
-
-
70149112575
-
Structural waters define a functional channel mediating activation of the GPCR, rhodopsin
-
Angel TE, Gupta S, Jastrzebska B, Palczewski K, Chance MR (2009) Structural waters define a functional channel mediating activation of the GPCR, rhodopsin. Proc Natl Acad Sci USA 106(34):14367-14372.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.34
, pp. 14367-14372
-
-
Angel, T.E.1
Gupta, S.2
Jastrzebska, B.3
Palczewski, K.4
Chance, M.R.5
-
32
-
-
77954635392
-
Conformational changes during the gating of a potassium channel revealed by structural mass spectrometry
-
Gupta S, et al. (2010) Conformational changes during the gating of a potassium channel revealed by structural mass spectrometry. Structure 18(7):839-846.
-
(2010)
Structure
, vol.18
, Issue.7
, pp. 839-846
-
-
Gupta, S.1
-
33
-
-
84881439707
-
Radiolytic mapping of solvent-contact surfaces in Photosystem II of higher plants: Experimental identification of putative water channels within the photosystem
-
Frankel LK, et al. (2013) Radiolytic mapping of solvent-contact surfaces in Photosystem II of higher plants: Experimental identification of putative water channels within the photosystem. J Biol Chem 288(32):23565-23572.
-
(2013)
J Biol Chem
, vol.288
, Issue.32
, pp. 23565-23572
-
-
Frankel, L.K.1
-
34
-
-
78650936291
-
Essential role of two tyrosines and two tryptophans on the photoprotection activity of the Orange Carotenoid Protein
-
Wilson A, Punginelli C, Couturier M, Perreau F, Kirilovsky D (2011) Essential role of two tyrosines and two tryptophans on the photoprotection activity of the Orange Carotenoid Protein. Biochim Biophys Acta 1807(3):293-301.
-
(2011)
Biochim Biophys Acta
, vol.1807
, Issue.3
, pp. 293-301
-
-
Wilson, A.1
Punginelli, C.2
Couturier, M.3
Perreau, F.4
Kirilovsky, D.5
-
36
-
-
34548847733
-
Using circular dichroism spectra to estimate protein secondary structure
-
Greenfield NJ (2006) Using circular dichroism spectra to estimate protein secondary structure. Nat Protoc 1(6):2876-2890.
-
(2006)
Nat Protoc
, vol.1
, Issue.6
, pp. 2876-2890
-
-
Greenfield, N.J.1
-
37
-
-
34248369857
-
Biological small-angle X-ray scattering facility at the Stanford Synchrotron Radiation Laboratory
-
Smolsky IL, et al. (2007) Biological small-angle X-ray scattering facility at the Stanford Synchrotron Radiation Laboratory. J Appl Cryst 40:s453-s458.
-
(2007)
J Appl Cryst
, vol.40
, pp. s453-s458
-
-
Smolsky, I.L.1
-
38
-
-
34248359067
-
ATSAS 2.1: Towards automated and web-supported small-angle scattering data analysis
-
Petoukhov MV, Konarev PV, Kikhney AG, Svergun DI (2007) ATSAS 2.1: Towards automated and web-supported small-angle scattering data analysis. J Appl Cryst 40:s223-s228.
-
(2007)
J Appl Cryst
, vol.40
, pp. s223-s228
-
-
Petoukhov, M.V.1
Konarev, P.V.2
Kikhney, A.G.3
Svergun, D.I.4
-
39
-
-
0141484613
-
PRIMUS: A Windows PC-based system for small-angle scattering data analysis
-
Konarev PV, Volkov VV, Sokolova AV, Koch MHJ, Svergun DI (2003) PRIMUS: A Windows PC-based system for small-angle scattering data analysis. J Appl Cryst 36(5):1277-1282.
-
(2003)
J Appl Cryst
, vol.36
, Issue.5
, pp. 1277-1282
-
-
Konarev, P.V.1
Volkov, V.V.2
Sokolova, A.V.3
Koch, M.H.J.4
Svergun, D.I.5
-
40
-
-
0026910457
-
Determination of the regularization parameter in indirect-transform methods using perceptual criteria
-
Svergun DI (1992) Determination of the regularization parameter in indirect-transform methods using perceptual criteria. J Appl Cryst 25:495-503.
-
(1992)
J Appl Cryst
, vol.25
, pp. 495-503
-
-
Svergun, D.I.1
-
41
-
-
0035124442
-
Automated matching of high- and low-resolution structural models
-
Kozin MB, Svergun DI (2001) Automated matching of high- and low-resolution structural models. J Appl Cryst 34:33-41.
-
(2001)
J Appl Cryst
, vol.34
, pp. 33-41
-
-
Kozin, M.B.1
Svergun, D.I.2
-
42
-
-
0037701585
-
Uniqueness of ab-initio shape determination in smallangle scattering
-
Volkov VV, Svergun DI (2003) Uniqueness of ab-initio shape determination in smallangle scattering. J Appl Cryst 36:860-864.
-
(2003)
J Appl Cryst
, vol.36
, pp. 860-864
-
-
Volkov, V.V.1
Svergun, D.I.2
-
43
-
-
4444221565
-
UCSF Chimera: A visualization system for exploratory research and analysis
-
Pettersen EF, et al. (2004) UCSF Chimera: A visualization system for exploratory research and analysis. J Comput Chem 25(13):1605-1612.
-
(2004)
J Comput Chem
, vol.25
, Issue.13
, pp. 1605-1612
-
-
Pettersen, E.F.1
-
44
-
-
84861894726
-
Improved protein hydrogen/deuterium exchange mass spectrometry platform with fully automated data processing
-
Zhang Z, Zhang A, Xiao G (2012) Improved protein hydrogen/deuterium exchange mass spectrometry platform with fully automated data processing. Anal Chem 84(11):4942-4949.
-
(2012)
Anal Chem
, vol.84
, Issue.11
, pp. 4942-4949
-
-
Zhang, Z.1
Zhang, A.2
Xiao, G.3
-
45
-
-
84890532160
-
Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra
-
Guttman M, Weis DD, Engen JR, Lee KK (2013) Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra. J Am Soc Mass Spectrom 24(12):1906-1912.
-
(2013)
J Am Soc Mass Spectrom
, vol.24
, Issue.12
, pp. 1906-1912
-
-
Guttman, M.1
Weis, D.D.2
Engen, J.R.3
Lee, K.K.4
|