Effect of structure variation of the aptamer-DNA duplex probe on the performance of displacement-based electrochemical aptamer sensors

Biosensors and Bioelectronics

Volumn 77, Issue , 2016, Pages 174-181

  Pang, Jie ^a   Zhang, Ziping ^a   Jin, Haizhu ^a  

^a YANTAI UNIVERSITY   (China)

Author keywords

Aptamer; Displacement; Electrochemical sensors; Signal gain

Indexed keywords

BINDING SITES; BINS; ELECTROCHEMICAL ELECTRODES; ELECTROCHEMICAL SENSORS; ELECTRODES; PROBES; SIGNALING;

APTAMERS; BACKGROUND SUPPRESSION; DISPLACEMENT; ELECTRON-TRANSFER EFFICIENCY; RECOGNITION SYSTEMS; SIGNAL GAIN; SIGNALING MECHANISMS; SINGLE-STRANDED DNA;

DNA;

ADENOSINE TRIPHOSPHATE; APTAMER; COMPLEMENTARY DNA; DOUBLE STRANDED DNA; DNA PROBE;

ARTICLE; BINDING SITE; BIOSENSOR; CHEMICAL STRUCTURE; DISPLACEMENT; ELECTROCHEMICAL APTAMER BASED SENSOR; ELECTRODE; ELECTRON TRANSPORT; NUCLEIC ACID PROBE; NUCLEOTIDE SEQUENCE; OXIDATION REDUCTION REACTION; PHYSICAL PHENOMENA; SIGNAL PROCESSING; CHEMISTRY; COMPARATIVE STUDY; CONDUCTOMETRY; DEVICE FAILURE ANALYSIS; DEVICES; DNA PROBE; EQUIPMENT DESIGN; EVALUATION STUDY; GENETIC PROCEDURES; GENETICS; MICROELECTROMECHANICAL SYSTEM; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; STRUCTURE ACTIVITY RELATION;

APTAMERS, NUCLEOTIDE; BIOSENSING TECHNIQUES; CONDUCTOMETRY; DNA PROBES; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; MICRO-ELECTRICAL-MECHANICAL SYSTEMS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 84943570216     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2015.09.035     Document Type: Article

References (37)

1. Baker B.R., Lai R.Y., Wood M.S., Doctor E.H., Heeger A.J., Plaxco K.W. J. Am. Chem. Soc. 2006, 128:3138-3139.
2. Bonham A.J., Hsieh K., Ferguson B.S., Vallée-Bélisle A., Ricci F., Soh H.T., Plaxco K.W. J. Am. Chem. Soc. 2012, 134:3346-3348.
3. Ferapontova E.E., Gothelf K.V. Electroanalysis 2009, 21:1261-1266.
4. Ferapontova E.E., Olsen E.M., Gothelf K.V. J. Am. Chem. Soc. 2008, 130:4256-4258.
5. Gerasimov J.Y., Schaefer C.S., Yang W., Grout R.S., Lai R.Y. Biosens. Bioelectron. 2013, 42:62-68.
6. Jiang B., Li F., Yang C., Xie J., Xiang Y., Yuan R. Anal. Chem. 2015, 87:3094-3098.
7. Kang D., Vallée-Bélisle A., Porchetta A., Plaxco K.W., Ricci F. Angew. Chem. Int. Ed. 2012, 51:6717-6721.
8. Lai R.Y., Plaxco K.W., Heeger A.J. Anal. Chem. 2007, 79:229-233.
9. Liu Y., Tuleouva N., Ramanculov E., Revzin A. Anal. Chem. 2010, 82:8131-8136.
10. Lu Y., Li X., Zhang L., Yu P., Su L., Mao L. Anal. Chem. 2008, 80:1883-1890.
11. Lubin A.A., Plaxco K.W. Acc. Chem. Res. 2010, 43:496-505.
12. Nutiu R., Li Y.F. J. Am. Chem. Soc. 2003, 125:4771-4778.
13. Plaxco K.W., Soh H.T. Trends Biotechnol. 2011, 29:1-5.
14. Ricci F., Adornetto G., Moscone D., Plaxco K.W., Palleschi G. Chem. Commun. 2010, 46:1742-1744.
15. Ricci F., Lai R.Y., Heeger A.J., Plaxco K.W., Sumner J.J. Langmuir 2007, 23:6827-6834.
16. Rowe A.A., Miller E.A., Plaxco K.W. Anal. Chem. 2010, 82:7090-7095.
17. Swensen J.S., Xiao Y., Ferguson B.S., Lubin A.A., Lai R.Y., Heeger A.J., Plaxco K.W., Soh H.T. J. Am. Chem. Soc. 2009, 131:4262-4266.
18. Urata H., Nomura K., Wada S.-i, Akagi M. Biochem. Biophys. Res. Commun. 2007, 360:459-463.
19. Vallée-Bélisle A., Plaxco K.W. Curr. Opin. Struct. Biol. 2010, 20:518-526.
20. Vallée-Bélisle A., Ricci F., Uzawa T., Xia F., Plaxco K.W. J. Am. Chem. Soc. 2012, 134:15197-15200.
21. White R.J., Phares N., Lubin A.A., Xiao Y., Plaxco K.W. Langmuir 2008, 24:10513-10518.
22. White R.J., Plaxco K.W. Anal. Chem. 2010, 82:73-76.
23. White R.J., Rowe A.A., Plaxco K.W. Analyst 2010, 135:589-594.
24. Wu D., Zhang Q., Chu X., Wang H., Shen G., Yu R. Biosens. Bioelectron. 2010, 25:1025-1031.
25. Wu L., Zhang X., Liu W., Xiong E., Chen J. Anal. Chem. 2013, 85:8397-8402.
26. Xia F., Zuo X., Yang R., White R.J., Xiao Y., Kang D., Gong X., Lubin A.A., Vallée-Bélisle A., Yuen J.D., Hsu B.Y.B., Plaxco K.W. J. Am. Chem. Soc. 2010, 132:8557-8559.
27. Xiao Y., Lai R.Y., Plaxco K.W. Nat. Protoc. 2007, 2:2875-2880.
28. Xiao Y., Lubin A.A., Heeger A.J., Plaxco K.W. Angew. Chem. Int. Ed. 2005, 44:5456-5459.
29. Xiao Y., Piorek B.D., Plaxco K.W., Heegert A.J. J. Am. Chem. Soc. 2005, 127:17990-17991.
30. Xiao Y., Rowe A.A., Plaxco K.W. J. Am. Chem. Soc. 2007, 129:262-263.
31. Xiao Y., Uzawa T., White R.J., DeMartini D., Plaxco K.W. Electroanalysis 2009, 21:1267-1271.
32. Yoshizumi J., Kumamoto S., Nakamura M., Yamana K. Analyst 2008, 133:323-325.
33. Yu Z.-g., Lai R.Y. Chem. Commun. 2012, 48:10523-10525.
34. Yu Z.-g., Lai R.Y. Anal. Chem. 2013, 85:3340-3346.
35. Zhao S., Yang W., Lai R.Y. Biosens. Bioelectron. 2011, 26:2442-2447.
36. Zhuang J., Fu L., Tang D., Xu M., Chen G., Yang H. Biosens. Bioelectron. 2013, 39:315-319.
37. Zuo X., Song S., Zhang J., Pan D., Wang L., Fan C. J. Am. Chem. Soc. 2007, 129:1042-1043.