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Volumn 31, Issue 19, 2015, Pages 3213-3215

IgSimulator: A versatile immunosequencing simulator

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBODY;

EID: 84943415893     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv326     Document Type: Article
Times cited : (27)

References (12)
  • 1
    • 84860771820 scopus 로고    scopus 로고
    • SPAdes: A new genome assembly algorithm and its applications to single-cell sequencing
    • Bankevich, A. et al. (2012) SPAdes: A new genome assembly algorithm and its applications to single-cell sequencing. J. Comput. Biol., 19, 455-477
    • (2012) J. Comput. Biol , vol.19 , pp. 455-477
    • Bankevich, A.1
  • 2
    • 84926350458 scopus 로고    scopus 로고
    • Immunoglobulin classification using the colored antibody graph
    • Przytycka, T.M. (ed. Lecture Notes in Computer Science
    • Bonissone, S. and Pevzner, P.A. (2015) Immunoglobulin classification using the colored antibody graph. In: Przytycka, T.M. (ed.), Research in Computational Molecular Biology (RECOMB), Lecture Notes in Computer Science, Vol. 9029, pp. 44-59
    • (2015) , Research in Computational Molecular Biology (RECOMB) , vol.9029 , pp. 44-59
    • Bonissone, S.1    Pevzner, P.A.2
  • 3
    • 77954601328 scopus 로고    scopus 로고
    • Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing
    • Boyd, S. et al. (2009) Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing. Sci. Transl. Med., 1, 12-23
    • (2009) Sci. Transl. Med , vol.1 , pp. 12-23
    • Boyd, S.1
  • 4
    • 84864762364 scopus 로고    scopus 로고
    • Frequency and genetic characterization of v(dd j recombinants in the human peripheral blood antibody repertoire
    • Briney, B.S. et al. (2012) Frequency and genetic characterization of v(dd)j recombinants in the human peripheral blood antibody repertoire. Immunology, 137, 56-64
    • (2012) Immunology , vol.137 , pp. 56-64
    • Briney, B.S.1
  • 5
    • 48449094247 scopus 로고    scopus 로고
    • IMGT/V-QUEST: The highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis
    • Brochet, X. et al. (2008) IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis. Nucleic Acids Res., 36, W503-W508
    • (2008) Nucleic Acids Res , vol.36 , pp. W503-W508
    • Brochet, X.1
  • 6
    • 84857145150 scopus 로고    scopus 로고
    • ART: A next-generation sequencing read simulator
    • Huang, W. et al. (2012) ART: a next-generation sequencing read simulator. Bioinformatics, 28, 593-594
    • (2012) Bioinformatics , vol.28 , pp. 593-594
    • Huang, W.1
  • 7
    • 0031897511 scopus 로고    scopus 로고
    • Somatic hypermutation in normal and transformed human B cells
    • Klien, U. et al. (1998) Somatic hypermutation in normal and transformed human B cells. Immunol. Rev., 162, 261-280
    • (1998) Immunol. Rev , vol.162 , pp. 261-280
    • Klien, U.1
  • 9
    • 84867095375 scopus 로고    scopus 로고
    • Statistical inference of the generation probability of T-cell receptors from sequence repertoires
    • Murugan, A. et al. (2012) Statistical inference of the generation probability of T-cell receptors from sequence repertoires. Proc. Natl. Acad. Sci. USA, 109, 161616
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 161616
    • Murugan, A.1
  • 10
    • 0026443954 scopus 로고
    • Somatic hypermutagenesis in immunoglobulin genes II influence of neighbouring base sequences on mutagenesis
    • Rogozin, I. and Kolchanov, N. (1992) Somatic hypermutagenesis in immunoglobulin genes. II. influence of neighbouring base sequences on mutagenesis. Biochim. Biophys. Acta, 1171, 11-18
    • (1992) Biochim. Biophys. Acta , vol.1171 , pp. 11-18
    • Rogozin, I.1    Kolchanov, N.2
  • 11
    • 84901857468 scopus 로고    scopus 로고
    • Towards error-free profiling of immune repertoires
    • Shugay, M. et al. (2014) Towards error-free profiling of immune repertoires. Nat. Methods, 11, 653-655
    • (2014) Nat. Methods , vol.11 , pp. 653-655
    • Shugay, M.1
  • 12
    • 65649122270 scopus 로고    scopus 로고
    • High-throughput sequencing of the zebrafish antibody repertoire
    • Weinstein, J. et al. (2009) High-throughput sequencing of the zebrafish antibody repertoire. Science, 324, 807-810
    • (2009) Science , vol.324 , pp. 807-810
    • Weinstein, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.