ART: A next-generation sequencing read simulator

Bioinformatics

Volumn 28, Issue 4, 2012, Pages 593-594

  Huang, Weichun ^a   Li, Leping ^a   Myers, Jason R ^a   Marth, Gabor T ^b  

^a NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES   (United States)

^b BOSTON COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 17; COMPUTER PROGRAM; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN;

CHROMOSOMES, HUMAN, PAIR 17; GENETIC VARIATION; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 84857145150     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr708     Document Type: Article

References (7)

1. Balzer, S. et al. (2010) Characteristics of 454 pyrosequencing data-enabling realistic simulation with flowsim. Bioinformatics, 26, i420-i425.
2. Bentley, D.R. (2006) Whole-genome re-sequencing. Curr. Opin. Genet. Dev., 16, 545-552.
3. Durbin, R.M. et al. (2010) A map of human genome variation from population-scale sequencing. Nature, 467, 1061-1073.
4. Huang, W. et al. (2006) Accurate anchoring alignment of divergent sequences. Bioinformatics, 22, 29-34.
5. Li, H. et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
6. Margulies, M. et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature, 437, 376-380.
7. Richter, D.C. et al. (2008) MetaSim: a sequencing simulator for genomics and metagenomics. PLoS One, 3, e3373.